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Search term: YDR091C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RLI1
SGD link S000002498
Alternative ID YDR091C
Description Essential iron-sulfur protein required for ribosome biogenesis and translation initiation; facilitates binding of a multifactor complex (MFC) of translation initiation factors to the small ribosomal subunit; predicted ABC family ATPase
Synonyms YDR091C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0063 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING RNAse L inhibitor, ABC superfamily

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g13640 GI:15231301
Arabidopsis thaliana (Ath) At4g19210 GI:15234181
Arabidopsis thaliana (Ath) At4g30300 GI:15234702
Caenorhabditis elegans (Cel) CE21713
(WBGene00012714)
GI:17555800 Q9U2K8
Drosophila melanogaster (Dme) 7295014 GI:7295014 Q9VSS1
Homo sapiens (Hsa) Hs16166977 GI:16166977
Homo sapiens (Hsa) Hs17452992 GI:17452992
Homo sapiens (Hsa) Hs18600950_1 GI:18600950
Homo sapiens (Hsa) Hs20532766 GI:20532766
Homo sapiens (Hsa) Hs4506559 GI:4506559
Saccharomyces cerevisiae (Sce) YDR091c
(S000002498)
GI:6320296 Q03195
Schizosaccharomyces pombe (Spo) SPBC14F5.06 GI:19113524 O60102
Encephalitozoon cuniculi (Ecu) ECU11g1580 GI:19074958 Q8SU15
Arabidopsis thaliana (Ath) At3g13640 GI:15231301
Arabidopsis thaliana (Ath) At4g19210 GI:15234181
Arabidopsis thaliana (Ath) At4g30300 GI:15234702
Caenorhabditis elegans (Cel) CE21713
(WBGene00012714)
GI:17555800 Q9U2K8
Drosophila melanogaster (Dme) 7295014 GI:7295014 Q9VSS1
Homo sapiens (Hsa) Hs16166977 GI:16166977
Homo sapiens (Hsa) Hs17452992 GI:17452992
Homo sapiens (Hsa) Hs18600950_1 GI:18600950
Homo sapiens (Hsa) Hs20532766 GI:20532766
Homo sapiens (Hsa) Hs4506559 GI:4506559
Saccharomyces cerevisiae (Sce) YDR091c
(S000002498)
GI:6320296 Q03195
Schizosaccharomyces pombe (Spo) SPBC14F5.06 GI:19113524 O60102
Encephalitozoon cuniculi (Ecu) ECU11g1580 GI:19074958 Q8SU15
Arabidopsis thaliana (Ath) At3g13640 GI:15231301
Arabidopsis thaliana (Ath) At4g19210 GI:15234181
Arabidopsis thaliana (Ath) At4g30300 GI:15234702
Caenorhabditis elegans (Cel) CE21713
(WBGene00012714)
GI:17555800 Q9U2K8
Drosophila melanogaster (Dme) 7295014 GI:7295014 Q9VSS1
Homo sapiens (Hsa) Hs16166977 GI:16166977
Homo sapiens (Hsa) Hs17452992 GI:17452992
Homo sapiens (Hsa) Hs18600950_1 GI:18600950
Homo sapiens (Hsa) Hs20532766 GI:20532766
Homo sapiens (Hsa) Hs4506559 GI:4506559
Saccharomyces cerevisiae (Sce) YDR091c
(S000002498)
GI:6320296 Q03195
Schizosaccharomyces pombe (Spo) SPBC14F5.06 GI:19113524 O60102
Encephalitozoon cuniculi (Ecu) ECU11g1580 GI:19074958 Q8SU15


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002498
ISS
SpoSPBC14F5.06
GO:0005737 cytoplasm C
IDA
SceS000002498
ISS
SpoSPBC14F5.06
GO:0005829 cytosol C
IDA
SpoSPBC14F5.06
GO:0022626 cytosolic ribosome C
IDA
SceS000002498
ISS
SpoSPBC14F5.06
GO:0005215 transporter activity F
ISS
AthAt4g19210
At4g30300
At3g13640
GO:0005506 iron ion binding F
IDA
SceS000002498
GO:0005524 ATP binding F
IC
SpoSPBC14F5.06
GO:0016887 ATPase activity F
ISS
SceS000002498
SpoSPBC14F5.06
GO:0051536 iron-sulfur cluster binding F
ISS
SpoSPBC14F5.06
GO:0000003 reproduction P
IMP
CelWBGene00012714
GO:0000054 ribosomal subunit export from nucleus P
IMP
SceS000002498
GO:0002119 nematode larval development P
IMP
CelWBGene00012714
GO:0006200 ATP catabolic process P
ISS
SpoSPBC14F5.06
GO:0006413 translational initiation P
IMP
SceS000002498
ISS
SpoSPBC14F5.06
GO:0006415 translational termination P
IGI
SceS000002498
IPI
SceS000002498
GO:0006417 regulation of translation P
RCA
SceS000002498
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00012714
GO:0010171 body morphogenesis P
IMP
CelWBGene00012714
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000002498
GO:0040007 growth P
IMP
CelWBGene00012714
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012714
GO:0040011 locomotion P
IMP
CelWBGene00012714
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00012714
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000002498
ISS
SpoSPBC14F5.06

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
2205

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ABCE1 GI:108773784
Pan troglodytes (Ptr) ABCE1 GI:55623284
Canis familiaris (Cfa) ABCE1 GI:73977800
Mus musculus (Mmu) Abce1
(MGI:1195458)
GI:114205431 P61222
Rattus norvegicus (Rno) Abce1
(RGD:1305301)
GI:109507962
Gallus gallus (Gga) ABCE1 GI:57530144
Drosophila melanogaster (Dme) pix GI:21355589
Anopheles gambiae (Aga) AgaP_AGAP002182 GI:119112994
Caenorhabditis elegans (Cel) abce-1
(CE21713;
WBGene00012714)
GI:17555800 Q9U2K8
Schizosaccharomyces pombe (Spo) SPBC14F5.06 GI:19113524 O60102
Saccharomyces cerevisiae (Sce) RLI1
(S000002498)
GI:6320296 Q03195
Kluyveromyces lactis (Kla) KLLA0C17556g GI:50306045
Eremothecium gossypii (Ego) AGOS_AGR125W GI:45201221
Magnaporthe grisea (Mgr) MGG_11382 GI:145614552
Neurospora crassa (Ncr) NCU03061.1 GI:32420107
Arabidopsis thaliana (Ath) ATRLI2 GI:22328793
Oryza sativa (Osa) Os11g0546000 GI:115485837
Plasmodium falciparum (Pfa) MAL13P1.344 GI:124514072


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002498
ISS
SpoSPBC14F5.06
GO:0005737 cytoplasm C
IDA
Dmepix
HsaABCE1
SceS000002498
ISS
Dmepix
SpoSPBC14F5.06
NAS
Dmepix
GO:0005739 mitochondrion C
IDA
HsaABCE1
ISS
Dmepix
GO:0005829 cytosol C
IDA
SpoSPBC14F5.06
GO:0005852 eukaryotic translation initiation factor 3
complex
C
IDA
Dmepix
GO:0022626 cytosolic ribosome C
IDA
SceS000002498
ISS
SpoSPBC14F5.06
GO:0005215 transporter activity F
ISS
AthATRLI2
GO:0005506 iron ion binding F
IDA
SceS000002498
GO:0005524 ATP binding F
IC
SpoSPBC14F5.06
IMP
Dmepix
NAS
Dmepix
GO:0008428 ribonuclease inhibitor activity F
ISS
Dmepix
TAS
HsaABCE1
GO:0016887 ATPase activity F
ISS
SceS000002498
SpoSPBC14F5.06
GO:0043024 ribosomal small subunit binding F
IDA
Dmepix
GO:0051536 iron-sulfur cluster binding F
ISS
SpoSPBC14F5.06
GO:0000003 reproduction P
IMP
CelWBGene00012714
GO:0000054 ribosomal subunit export from nucleus P
IMP
SceS000002498
GO:0002119 nematode larval development P
IMP
CelWBGene00012714
GO:0006200 ATP catabolic process P
ISS
SpoSPBC14F5.06
GO:0006401 RNA catabolic process P
TAS
HsaABCE1
GO:0006412 translation P
IMP
Dmepix
GO:0006413 translational initiation P
IMP
Dmepix
SceS000002498
ISS
SpoSPBC14F5.06
GO:0006415 translational termination P
IGI
SceS000002498
IPI
SceS000002498
GO:0006417 regulation of translation P
RCA
SceS000002498
GO:0009615 response to virus P
TAS
HsaABCE1
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00012714
GO:0010171 body morphogenesis P
IMP
CelWBGene00012714
GO:0016049 cell growth P
IMP
Dmepix
GO:0016071 mRNA metabolic process P
ISS
Dmepix
GO:0018193 peptidyl-amino acid modification P
RCA
SceS000002498
GO:0040007 growth P
IMP
CelWBGene00012714
NAS
Dmepix
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00012714
GO:0040011 locomotion P
IMP
CelWBGene00012714
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00012714
GO:0042273 ribosomal large subunit biogenesis P
IMP
SceS000002498
ISS
SpoSPBC14F5.06
GO:0043524 negative regulation of neuron apoptosis P
IMP
Dmepix

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1923

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga4313 ENSANGP00000013543
Anopheles gambiae (Aga) aga4314 ENSANGP00000022549
Ashbya gossypii (Ago) ago4436 AGR125W
Arabidopsis thaliana (Ath) ath13539 At3g13640.1
Arabidopsis thaliana (Ath) ath19811 At4g19210.1
Caenorhabditis elegans (Cel) cel18553 Y39E4B.1
(CE21713;
WBGene00012714)
Candida glabrata (Cgl) cgl1973 CAGL0G08041g
Cryptococcus neoformans (Cne) cne2438 181.m08473
Dictyostelium discoideum (Ddi) ddi13179 DDB0191227
Debaryomyces hansenii (Dha) dha6295 DEHA0G13343g
Drosophila melanogaster (Dme) dme8668 CG5651-PA
(FBgn0035946)
Drosophila melanogaster (Dme) dme8669 CG5651-PB
(FBgn0035946)
Danio rerio (Dre) dre30169 ENSDARP00000011642
(abce1)
Q502R2
Encephalitozoon cuniculi (Ecu) ecu1046 19074958
Takifugu rubripes (Fru) fru12640 SINFRUP00000161291
Gallus gallus (Gga) gga17342 ENSGALP00000016175
(ABCE1)
Q5ZJX6
Homo sapiens (Hsa) hsa24700 ENSP00000296577
(ABCE1)
P61221
Kluyveromyces lactis (Kla) kla1983 KLLA0C17556g
Mus musculus (Mmu) mmu26248 ENSMUSP00000079379
(MGI:1195458)
P61222
Neurospora crassa (Ncr) ncr2966 NCU03061.2
Oryza sativa (Osa) osa71407 7163.m00203
Plasmodium falciparum (Pfa) pfa4115 MAL13P1.344
Rattus norvegicus (Rno) rno14836 ENSRNOP00000024753
(RGD:1305301)
Saccharomyces cerevisiae (Sce) sce1126 YDR091C
(S000002498)
Schizosaccharomyces pombe (Spo) spo2866 SPBC14F5.06 O60102
Yarrowia lipolytica (Yli) yli592 YALI0A17941g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002498
ISS
SpoSPBC14F5.06
GO:0005737 cytoplasm C
IDA
SceS000002498
ISS
SpoSPBC14F5.06
GO:0005829 cytosol C
IDA
SpoSPBC14F5.06
GO:0022626 cytosolic ribosome C
IDA
SceS000002498
ISS
SpoSPBC14F5.06
GO:0005215 transporter activity F
ISS
AthAt4g19210
At3g13640
GO:0005506 iron ion binding F
IDA
SceS000002498
GO:0005524 ATP binding F
IC
SpoSPBC14F5.06
GO:0016887 ATPase activity F
ISS
SceS000002498
SpoSPBC14F5.06
GO:0051536 iron-sulfur cluster binding F
ISS
SpoSPBC14F5.06
GO:0000003 reproduction P
IMP
CelWBGene00012714
GO:0000054 ribosomal subunit export from nucleus P
IMP
SceS000002498