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Search term: YDR101C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ARX1
SGD link S000002508
Alternative ID YDR101C
Description Shuttling pre-60S factor; involved in the biogenesis of ribosomal large subunit biogenesis; interacts directly with Alb1; responsible for Tif6 recycling defects in absence of Rei1; associated with the ribosomal export complex
Synonyms YDR101C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2776 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Metallopeptidase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g51800 GI:15231039
Caenorhabditis elegans (Cel) CE21275
(WBGene00021088)		 GI:17542840 Q9N5B3
Drosophila melanogaster (Dme) 7295435 GI:7295435 Q9VRP2
Homo sapiens (Hsa) Hs5453842 GI:5453842
Homo sapiens (Hsa) Hs18572159 GI:18572159
Homo sapiens (Hsa) Hs22059653_1 GI:22059653
Homo sapiens (Hsa) Hs20551931 GI:20551931
Homo sapiens (Hsa) Hs20553033 GI:20553033
Saccharomyces cerevisiae (Sce) YDR101c
(S000002508)		 GI:6320306 Q03862
Schizosaccharomyces pombe (Spo) SPAC23H4.09 GI:19114309 Q09184
Schizosaccharomyces pombe (Spo) SPBC23E6.05 GI:19113397 O60180


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC23H4.09
SPBC23E6.05
GO:0005635 nuclear envelope C
IDA
SpoSPBC23E6.05
GO:0005654 nucleoplasm C
IDA
SceS000002508
GO:0005730 nucleolus C
IDA
AthAt3g51800
GO:0005737 cytoplasm C
IDA
SceS000002508
GO:0005829 cytosol C
IDA
SpoSPBC23E6.05
SPAC23H4.09
GO:0005886 plasma membrane C
IDA
AthAt3g51800
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000002508
GO:0003674 molecular_function F
ND
SceS000002508
GO:0003677 DNA binding F
IDA
SpoSPAC23H4.09
GO:0008235 metalloexopeptidase activity F
ISS
AthAt3g51800
GO:0008237 metallopeptidase activity F
ISS
SpoSPAC23H4.09
GO:0006508 proteolysis P
ISS
AthAt3g51800
GO:0008150 biological_process P
ND
SpoSPAC23H4.09
GO:0042273 ribosomal large subunit biogenesis P
IDA
SceS000002508
IGI
SceS000002508
IMP
SceS000002508
ISS
SpoSPBC23E6.05

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38671

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) arx1
(SPBC23E6.05)		 GI:19113397 O60180
Saccharomyces cerevisiae (Sce) ARX1
(S000002508)		 GI:6320306 Q03862
Kluyveromyces lactis (Kla) KLLA0F11979g GI:50311199
Eremothecium gossypii (Ego) AGOS_AGR102C GI:45201198


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC23E6.05
GO:0005635 nuclear envelope C
IDA
SpoSPBC23E6.05
GO:0005654 nucleoplasm C
IDA
SceS000002508
GO:0005737 cytoplasm C
IDA
SceS000002508
GO:0005829 cytosol C
IDA
SpoSPBC23E6.05
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000002508
GO:0003674 molecular_function F
ND
SceS000002508
GO:0042273 ribosomal large subunit biogenesis P
IDA
SceS000002508
IGI
SceS000002508
IMP
SceS000002508
ISS
SpoSPBC23E6.05

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17577

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4413 AGR102C
Candida glabrata (Cgl) cgl4354 CAGL0L06314g
Debaryomyces hansenii (Dha) dha6296 DEHA0G13387g
Kluyveromyces lactis (Kla) kla4623 KLLA0F11979g
Saccharomyces cerevisiae (Sce) sce1138 YDR101C
(S000002508)
Schizosaccharomyces pombe (Spo) spo1046 SPBC23E6.05 O60180
Yarrowia lipolytica (Yli) yli1941 YALI0C05599g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC23E6.05
GO:0005635 nuclear envelope C
IDA
SpoSPBC23E6.05
GO:0005654 nucleoplasm C
IDA
SceS000002508
GO:0005737 cytoplasm C
IDA
SceS000002508
GO:0005829 cytosol C
IDA
SpoSPBC23E6.05
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000002508
GO:0003674 molecular_function F
ND
SceS000002508
GO:0042273 ribosomal large subunit biogenesis P
IDA
SceS000002508
IGI
SceS000002508
IMP
SceS000002508
ISS
SpoSPBC23E6.05

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC23E6.05
(O60180)		 YDR101C
(S000002508)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC23E6.05
GO:0005635 nuclear envelope C
IDA
SpoSPBC23E6.05
GO:0005654 nucleoplasm C
IDA
SceS000002508
GO:0005737 cytoplasm C
IDA
SceS000002508
GO:0005829 cytosol C
IDA
SpoSPBC23E6.05
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000002508
GO:0003674 molecular_function F
ND
SceS000002508
GO:0042273 ribosomal large subunit biogenesis P
IDA
SceS000002508
IGI
SceS000002508
IMP
SceS000002508
ISS
SpoSPBC23E6.05

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