YOGY Home YOGY Help

Search term: YDR108W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name GSG1
SGD link S000002515
Alternative ID YDR108W
Description Subunit of TRAPP (transport protein particle), a multi-subunit complex involved in targeting and/or fusion of ER-to-Golgi transport vesicles with their acceptor compartment; protein has late meiotic role, following DNA replication
Synonyms YDR108W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1938 ACDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Protein with predicted involvement in meiosis (GSG1)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g16280 GI:15237319
Caenorhabditis elegans (Cel) CE10612 GI:17507401
Caenorhabditis elegans (Cel) CE26922 GI:17507399
Drosophila melanogaster (Dme) 7293764 GI:7293764
Homo sapiens (Hsa) Hs7662448 GI:7662448
Saccharomyces cerevisiae (Sce) YDR108w
(S000002515)		 GI:6320313 P46944
Schizosaccharomyces pombe (Spo) SPBC1604.19c GI:19113413 O94731
Schizosaccharomyces pombe (Spo) SPBC1734.07c GI:19112216 O74748


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000407 pre-autophagosomal structure C
IDA
SceS000002515
GO:0005634 nucleus C
IDA
SpoSPBC1604.19c
NAS
SpoSPBC1734.07c
GO:0005829 cytosol C
IDA
SpoSPBC1604.19c
SPBC1734.07c
GO:0030008 TRAPP complex C
IDA
SceS000002515
ISS
SpoSPBC1604.19c
SPBC1734.07c
GO:0032153 cell division site C
IDA
SpoSPBC1604.19c
GO:0003674 molecular_function F
ND
SceS000002515
SpoSPBC1734.07c
SPBC1604.19c
GO:0006886 intracellular protein transport P
IC
SpoSPBC1604.19c
ISS
SpoSPBC1734.07c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000002515
ISS
SpoSPBC1734.07c
SPBC1604.19c
GO:0006914 autophagy P
IMP
SceS000002515
ISS
SpoSPBC1734.07c
SPBC1604.19c
GO:0007126 meiosis P
IMP
SceS000002515
GO:0008150 biological_process P
ND
AthAt5g16280
GO:0016050 vesicle organization P
IMP
SceS000002515
GO:0016236 macroautophagy P
IMP
SceS000002515
GO:0030242 peroxisome degradation P
IMP
SceS000002515
ISS
SpoSPBC1734.07c
SPBC1604.19c
GO:0032258 CVT pathway P
IMP
SceS000002515
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000002515

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38674

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) GSG1
(S000002515)		 GI:6320313 P46944
Kluyveromyces lactis (Kla) KLLA0F18953g GI:50311799
Eremothecium gossypii (Ego) AGOS_AGR096C GI:45201191


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000407 pre-autophagosomal structure C
IDA
SceS000002515
GO:0030008 TRAPP complex C
IDA
SceS000002515
GO:0003674 molecular_function F
ND
SceS000002515
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000002515
GO:0006914 autophagy P
IMP
SceS000002515
GO:0007126 meiosis P
IMP
SceS000002515
GO:0016050 vesicle organization P
IMP
SceS000002515
GO:0016236 macroautophagy P
IMP
SceS000002515
GO:0030242 peroxisome degradation P
IMP
SceS000002515
GO:0032258 CVT pathway P
IMP
SceS000002515
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000002515

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_20677

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4406 AGR096C
Candida glabrata (Cgl) cgl277 CAGL0B01705g
Debaryomyces hansenii (Dha) dha4020 DEHA0E17578g
Kluyveromyces lactis (Kla) kla4930 KLLA0F18953g
Saccharomyces cerevisiae (Sce) sce1145 YDR108W
(S000002515)
Schizosaccharomyces pombe (Spo) spo1934 SPBC1604.19c O94731


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000407 pre-autophagosomal structure C
IDA
SceS000002515
GO:0005634 nucleus C
IDA
SpoSPBC1604.19c
GO:0005829 cytosol C
IDA
SpoSPBC1604.19c
GO:0030008 TRAPP complex C
IDA
SceS000002515
ISS
SpoSPBC1604.19c
GO:0032153 cell division site C
IDA
SpoSPBC1604.19c
GO:0003674 molecular_function F
ND
SceS000002515
SpoSPBC1604.19c
GO:0006886 intracellular protein transport P
IC
SpoSPBC1604.19c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000002515
ISS
SpoSPBC1604.19c
GO:0006914 autophagy P
IMP
SceS000002515
ISS
SpoSPBC1604.19c
GO:0007126 meiosis P
IMP
SceS000002515
GO:0016050 vesicle organization P
IMP
SceS000002515
GO:0016236 macroautophagy P
IMP
SceS000002515
GO:0030242 peroxisome degradation P
IMP
SceS000002515
ISS
SpoSPBC1604.19c
GO:0032258 CVT pathway P
IMP
SceS000002515
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000002515

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC1734.07c
(O74748)		 YDR108W
(S000002515)
SPBC1604.19c
(O94731)		 YDR108W
(S000002515)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000407 pre-autophagosomal structure C
IDA
SceS000002515
GO:0005634 nucleus C
IDA
SpoSPBC1604.19c
NAS
SpoSPBC1734.07c
GO:0005829 cytosol C
IDA
SpoSPBC1604.19c
SPBC1734.07c
GO:0030008 TRAPP complex C
IDA
SceS000002515
ISS
SpoSPBC1604.19c
SPBC1734.07c
GO:0032153 cell division site C
IDA
SpoSPBC1604.19c
GO:0003674 molecular_function F
ND
SceS000002515
SpoSPBC1734.07c
SPBC1604.19c
GO:0006886 intracellular protein transport P
IC
SpoSPBC1604.19c
ISS
SpoSPBC1734.07c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000002515
ISS
SpoSPBC1734.07c
SPBC1604.19c
GO:0006914 autophagy P
IMP
SceS000002515
ISS
SpoSPBC1734.07c
SPBC1604.19c
GO:0007126 meiosis P
IMP
SceS000002515
GO:0016050 vesicle organization P
IMP
SceS000002515
GO:0016236 macroautophagy P
IMP
SceS000002515
GO:0030242 peroxisome degradation P
IMP
SceS000002515
ISS
SpoSPBC1734.07c
SPBC1604.19c
GO:0032258 CVT pathway P
IMP
SceS000002515
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000002515

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk