YOGY Home YOGY Help

Search term: YDR117C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TMA64
SGD link S000002524
Alternative ID YDR117C
Description Protein of unknown function that associates with ribosomes; has a putative RNA binding domain
Synonyms YDR117C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2522 AC-HY--

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Filamentous baseplate protein Ligatin, contains PUA domain

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g71350 GI:15217438
Caenorhabditis elegans (Cel) CE27093 GI:17532061
Homo sapiens (Hsa) Hs11386191 GI:11386191
Saccharomyces cerevisiae (Sce) YDR117c
(S000002524)		 GI:6320322 Q04600


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005840 ribosome C
IDA
SceS000002524
GO:0003723 RNA binding F
ISS
SceS000002524
GO:0003743 translation initiation factor activity F
ISS
AthAt1g71350
GO:0006413 translational initiation P
ISS
AthAt1g71350
GO:0008150 biological_process P
ND
SceS000002524

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68637

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) TMA64
(S000002524)		 GI:6320322 Q04600
Kluyveromyces lactis (Kla) KLLA0F19294g GI:50311831


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005840 ribosome C
IDA
SceS000002524
GO:0003723 RNA binding F
ISS
SceS000002524
GO:0008150 biological_process P
ND
SceS000002524

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1796

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8954 ENSANGP00000008820
Ashbya gossypii (Ago) ago4389 AGR079W
Arabidopsis thaliana (Ath) ath6424 At1g71350.1
Caenorhabditis elegans (Cel) cel2717 C25H3.4
(CE29676;
WBGene00016113)
Candida glabrata (Cgl) cgl283 CAGL0B01837g
Dictyostelium discoideum (Ddi) ddi7969 DDB0187566
Debaryomyces hansenii (Dha) dha1047 DEHA0B08239g
Drosophila melanogaster (Dme) dme14974 CG31426-PA
(FBgn0041588)
Danio rerio (Dre) dre22938 ENSDARP00000009582
(zgc:63669)		 Q7SXY6
Takifugu rubripes (Fru) fru12258 SINFRUP00000133696
Takifugu rubripes (Fru) fru12259 SINFRUP00000165796
Gallus gallus (Gga) gga13450 ENSGALP00000001252
Gallus gallus (Gga) gga13449 ENSGALP00000001253
(LGTN)		 Q5ZMF0
Homo sapiens (Hsa) hsa2953 ENSP00000271764
(LGTN)		 P41214-1
Homo sapiens (Hsa) hsa2952 ENSP00000342363
Kluyveromyces lactis (Kla) kla4946 KLLA0F19294g
Mus musculus (Mmu) mmu1016 ENSMUSP00000063559
Mus musculus (Mmu) mmu1015 ENSMUSP00000063894
(MGI:109342)		 Q61211-1
Mus musculus (Mmu) mmu1017 ENSMUSP00000067461
(MGI:109342)		 Q8C8I3
Oryza sativa (Osa) osa24582 3865.m00133
Oryza sativa (Osa) osa24614 3865.m00169
Oryza sativa (Osa) osa53948 6146.m00123
Plasmodium falciparum (Pfa) pfa4540 PFI0365w
Rattus norvegicus (Rno) rno9042 ENSRNOP00000006686
(RGD:1561765)
Rattus norvegicus (Rno) rno9043 ENSRNOP00000006768
(RGD:1561765)		 Q5PPG7
Rattus norvegicus (Rno) rno9044 ENSRNOP00000040503
Rattus norvegicus (Rno) rno9041 ENSRNOP00000047548
(RGD:1561765)
Saccharomyces cerevisiae (Sce) sce1154 YDR117C
(S000002524)
Yarrowia lipolytica (Yli) yli3242 YALI0D12727g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005840 ribosome C
IDA
SceS000002524
GO:0003723 RNA binding F
ISS
SceS000002524
GO:0003743 translation initiation factor activity F
ISS
AthAt1g71350
DmeFBgn0041588
GO:0006413 translational initiation P
ISS
AthAt1g71350
DmeFBgn0041588
GO:0008150 biological_process P
ND
SceS000002524

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk