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Search term: YDR145W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TAF12
SGD link S000002552
Alternative ID YDR145W
Description Subunit (61/68 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation and in chromatin modification, similar to histone H2A
Synonyms YDR145W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1142 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g17440 GI:18394483
Arabidopsis thaliana (Ath) At3g10070 GI:18398741
Caenorhabditis elegans (Cel) CE22575 GI:17556262
Drosophila melanogaster (Dme) 7295681 GI:7295681 Q9VR21
Drosophila melanogaster (Dme) 7299489 GI:17737915
Homo sapiens (Hsa) Hs5032153 GI:5032153 Q16514
Saccharomyces cerevisiae (Sce) YDR145w
(S000002552)		 GI:6320349 Q03761
Schizosaccharomyces pombe (Spo) SPAC15A10.02 GI:19115201 O13722
Encephalitozoon cuniculi (Ecu) ECU02g1500 GI:19074069 Q8SSD3
Encephalitozoon cuniculi (Ecu) ECU10g0930 GI:19074702 Q8SUE3
Arabidopsis thaliana (Ath) At1g17440 GI:18394483
Arabidopsis thaliana (Ath) At3g10070 GI:18398741
Caenorhabditis elegans (Cel) CE22575 GI:17556262
Drosophila melanogaster (Dme) 7295681 GI:7295681 Q9VR21
Drosophila melanogaster (Dme) 7299489 GI:17737915
Homo sapiens (Hsa) Hs5032153 GI:5032153 Q16514
Saccharomyces cerevisiae (Sce) YDR145w
(S000002552)		 GI:6320349 Q03761
Schizosaccharomyces pombe (Spo) SPAC15A10.02 GI:19115201 O13722
Encephalitozoon cuniculi (Ecu) ECU02g1500 GI:19074069 Q8SSD3
Encephalitozoon cuniculi (Ecu) ECU10g0930 GI:19074702 Q8SUE3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0000790 nuclear chromatin C
IC
SpoSPAC15A10.02
GO:0005634 nucleus C
IDA
AthAt1g17440
SpoSPAC15A10.02
GO:0005669 transcription factor TFIID complex C
IDA
SceS000002552
ISS
AthAt1g17440
SpoSPAC15A10.02
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000002552
GO:0003682 chromatin binding F
IDA
SceS000002552
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
IMP
SceS000002552
GO:0016251 general RNA polymerase II transcription factor
activity		 F
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0016986 transcription initiation factor
activity		 F
ISS
AthAt1g17440
GO:0017025 TATA-binding protein binding F
IDA
SceS000002552
GO:0006338 chromatin remodeling P
IC
SpoSPAC15A10.02
GO:0006352 transcription initiation P
ISS
AthAt1g17440
RCA
SceS000002552
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
ISS
SpoSPAC15A10.02
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000002552
GO:0009867 jasmonic acid mediated signaling
pathway		 P
IMP
AthAt1g17440
GO:0010104 regulation of ethylene mediated signaling
pathway		 P
IMP
AthAt1g17440
GO:0016568 chromatin modification P
IDA
SceS000002552
IMP
SceS000002552
GO:0016573 histone acetylation P
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0032568 general transcription from RNA polymerase II
promoter		 P
IDA
SceS000002552
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IMP
SceS000002552
GO:0045449 regulation of transcription P
ISS
SpoSPAC15A10.02
GO:0045941 positive regulation of transcription P
RCA
SceS000002552
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly		 P
IMP
SceS000002552

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
68477

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) TAF12 GI:206725450
Pan troglodytes (Ptr) TAF12 GI:114555126
Canis familiaris (Cfa) LOC609994 GI:73950087
Canis familiaris (Cfa) LOC608297 GI:73966013
Mus musculus (Mmu) Taf12
(MGI:1913714)		 GI:13385026 Q3UT56
Gallus gallus (Gga) TAF12 GI:71897375
Drosophila melanogaster (Dme) Taf12
(FBgn0011290)		 GI:24646042
Anopheles gambiae (Aga) AgaP_AGAP003135 GI:158291299
Saccharomyces cerevisiae (Sce) TAF12
(S000002552)		 GI:6320349 Q03761
Kluyveromyces lactis (Kla) KLLA0D16368g GI:50307605
Eremothecium gossypii (Ego) AGOS_AGL195C GI:45200902
Arabidopsis thaliana (Ath) EER4 GI:30685323
Oryza sativa (Osa) Os01g0846900 GI:115441027


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000002552
GO:0000125 PCAF complex C
IDA
HsaTAF12
GO:0005634 nucleus C
IDA
AthEER4
HsaTAF12
MmuMGI:1913714
NAS
DmeFBgn0011290
GO:0005654 nucleoplasm C
EXP
HsaTAF12
GO:0005669 transcription factor TFIID complex C
IDA
HsaTAF12
SceS000002552
ISO
MmuMGI:1913714
ISS
AthEER4
DmeFBgn0011290
GO:0005737 cytoplasm C
IDA
HsaTAF12
GO:0005886 plasma membrane C
IDA
HsaTAF12
GO:0030914 STAGA complex C
IDA
HsaTAF12
MmuMGI:1913714
GO:0033276 transcription factor TFTC complex C
IDA
HsaTAF12
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000002552
GO:0003677 DNA binding F
IDA
HsaTAF12
MmuMGI:1913714
GO:0003682 chromatin binding F
IDA
SceS000002552
GO:0003700 transcription factor activity F
IDA
HsaTAF12
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
IMP
SceS000002552
GO:0003713 transcription coactivator activity F
IDA
HsaTAF12
GO:0004402 histone acetyltransferase activity F
IDA
HsaTAF12
GO:0005515 protein binding F
IPI
HsaTAF12
MmuMGI:1913714
GO:0016251 general RNA polymerase II transcription factor
activity		 F
IDA
SceS000002552
ISS
DmeFBgn0011290
TAS
HsaTAF12
GO:0016986 transcription initiation factor
activity		 F
IDA
HsaTAF12
ISS
AthEER4
GO:0017025 TATA-binding protein binding F
IDA
SceS000002552
GO:0006352 transcription initiation P
ISS
AthEER4
RCA
SceS000002552
GO:0006355 regulation of transcription, DNA-dependent P
NAS
DmeFBgn0011290
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
EXP
HsaTAF12
IDA
HsaTAF12
ISS
DmeFBgn0011290
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
EXP
HsaTAF12
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000002552
GO:0008150 biological_process P
ND
MmuMGI:1913714
GO:0009867 jasmonic acid mediated signaling
pathway		 P
IMP
AthEER4
GO:0010104 regulation of ethylene mediated signaling
pathway		 P
IMP
AthEER4
GO:0016568 chromatin modification P
IDA
SceS000002552
IMP
SceS000002552
GO:0016573 histone acetylation P
IDA
SceS000002552
GO:0032568 general transcription from RNA polymerase II
promoter		 P
IDA
SceS000002552
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IMP
SceS000002552
GO:0043966 histone H3 acetylation P
IDA
HsaTAF12
GO:0045941 positive regulation of transcription P
RCA
SceS000002552
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly		 P
IMP
SceS000002552

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2522

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga5420 ENSANGP00000016676
Ashbya gossypii (Ago) ago4117 AGL195C
Arabidopsis thaliana (Ath) ath1864 At1g17440.1
Arabidopsis thaliana (Ath) ath1865 At1g17440.2
Arabidopsis thaliana (Ath) ath13093 At3g10070.1
Caenorhabditis elegans (Cel) cel19956 Y56A3A.4
(CE31842;
WBGene00006396)
Candida glabrata (Cgl) cgl1002 CAGL0E01397g
Cryptococcus neoformans (Cne) cne444 163.m06404
Dictyostelium discoideum (Ddi) ddi11824 DDB0231001
Debaryomyces hansenii (Dha) dha4618 DEHA0F05115g
Drosophila melanogaster (Dme) dme12097 CG17358-PA
(FBgn0011290)
Drosophila melanogaster (Dme) dme12095 CG17358-PB
(FBgn0011290)
Drosophila melanogaster (Dme) dme12096 CG17358-PC
(FBgn0011290)
Danio rerio (Dre) dre7641 ENSDARP00000016195
Takifugu rubripes (Fru) fru7326 SINFRUP00000134942
Gallus gallus (Gga) gga12824 ENSGALP00000001461
(TAF12)		 Q5ZKX3
Homo sapiens (Hsa) hsa693 ENSP00000263974
(TAF12)		 Q16514-1
Homo sapiens (Hsa) hsa692 ENSP00000349852
Kluyveromyces lactis (Kla) kla2781 KLLA0D16368g
Mus musculus (Mmu) mmu19014 ENSMUSP00000030731
(MGI:1913714)		 Q8VE65
Neurospora crassa (Ncr) ncr2164 NCU02223.2
Oryza sativa (Osa) osa12344 2822.m00135
Oryza sativa (Osa) osa13786 2871.m00136
Oryza sativa (Osa) osa31674 4436.m00143
Oryza sativa (Osa) osa31691 4436.m00301
Oryza sativa (Osa) osa31692 4436.m00302
Saccharomyces cerevisiae (Sce) sce1183 YDR145W
(S000002552)
Schizosaccharomyces pombe (Spo) spo3628 SPAC15A10.02 O13722
Yarrowia lipolytica (Yli) yli1852 YALI0C03333g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0000790 nuclear chromatin C
IC
SpoSPAC15A10.02
GO:0005634 nucleus C
IDA
AthAt1g17440
CelWBGene00006396
MmuMGI:1913714
SpoSPAC15A10.02
NAS
DmeFBgn0011290
GO:0005669 transcription factor TFIID complex C
IDA
SceS000002552
ISO
MmuMGI:1913714
ISS
AthAt1g17440
DmeFBgn0011290
SpoSPAC15A10.02
GO:0030914 STAGA complex C
IDA
MmuMGI:1913714
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000002552
GO:0003677 DNA binding F
IDA
MmuMGI:1913714
GO:0003682 chromatin binding F
IDA
SceS000002552
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
IMP
SceS000002552
GO:0005515 protein binding F
IPI
MmuMGI:1913714
GO:0016251 general RNA polymerase II transcription factor
activity		 F
IDA
SceS000002552
ISS
DmeFBgn0011290
SpoSPAC15A10.02
GO:0016986 transcription initiation factor
activity		 F
ISS
AthAt1g17440
GO:0017025 TATA-binding protein binding F
IDA
SceS000002552
GO:0006338 chromatin remodeling P
IC
SpoSPAC15A10.02
GO:0006352 transcription initiation P
ISS
AthAt1g17440
RCA
SceS000002552
GO:0006355 regulation of transcription, DNA-dependent P
NAS
DmeFBgn0011290
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
ISS
DmeFBgn0011290
SpoSPAC15A10.02
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000002552
GO:0008150 biological_process P
ND
MmuMGI:1913714
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00006396
GO:0009867 jasmonic acid mediated signaling
pathway		 P
IMP
AthAt1g17440
GO:0010104 regulation of ethylene mediated signaling
pathway		 P
IMP
AthAt1g17440
GO:0016568 chromatin modification P
IDA
SceS000002552
IMP
SceS000002552
GO:0016573 histone acetylation P
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0032568 general transcription from RNA polymerase II
promoter		 P
IDA
SceS000002552
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IMP
SceS000002552
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00006396
GO:0045449 regulation of transcription P
ISS
SpoSPAC15A10.02
GO:0045941 positive regulation of transcription P
RCA
SceS000002552
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly		 P
IMP
SceS000002552

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC15A10.02
(O13722)		 YDR145W
(S000002552)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0000790 nuclear chromatin C
IC
SpoSPAC15A10.02
GO:0005634 nucleus C
IDA
SpoSPAC15A10.02
GO:0005669 transcription factor TFIID complex C
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000002552
GO:0003682 chromatin binding F
IDA
SceS000002552
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
IMP
SceS000002552
GO:0016251 general RNA polymerase II transcription factor
activity		 F
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0017025 TATA-binding protein binding F
IDA
SceS000002552
GO:0006338 chromatin remodeling P
IC
SpoSPAC15A10.02
GO:0006352 transcription initiation P
RCA
SceS000002552
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
ISS
SpoSPAC15A10.02
GO:0006984 ER-nucleus signaling pathway P
RCA
SceS000002552
GO:0016568 chromatin modification P
IDA
SceS000002552
IMP
SceS000002552
GO:0016573 histone acetylation P
IDA
SceS000002552
ISS
SpoSPAC15A10.02
GO:0032568 general transcription from RNA polymerase II
promoter		 P
IDA
SceS000002552
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IMP
SceS000002552
GO:0045449 regulation of transcription P
ISS
SpoSPAC15A10.02
GO:0045941 positive regulation of transcription P
RCA
SceS000002552
GO:0051123 RNA polymerase II transcriptional preinitiation
complex assembly		 P
IMP
SceS000002552

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