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Search term: YDR159W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SAC3
SGD link S000002566
Alternative ID YDR159W
Description Nuclear pore-associated protein, forms a complex with Thp1p that is involved in transcription and in mRNA export from the nucleus
Synonyms YDR159W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1860 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALINGCELLULAR PROCESSES AND SIGNALING Nuclear protein export factor

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g06290 GI:15230684
Caenorhabditis elegans (Cel) CE04432
(WBGene00017642)		 GI:17539938 Q19643
Drosophila melanogaster (Dme) 7293322 GI:7293322
Drosophila melanogaster (Dme) 7294935 GI:7294935
Homo sapiens (Hsa) Hs19923191
(MCM3AP)		 GI:19923191 O60318
Homo sapiens (Hsa) Hs9558739 GI:9558739
Saccharomyces cerevisiae (Sce) YDR159w
(S000002566)		 GI:6320363 P46674
Schizosaccharomyces pombe (Spo) SPCC576.05 GI:19075932 O74889
Schizosaccharomyces pombe (Spo) SPCC70.06 GI:19076041 Q9USI4
Encephalitozoon cuniculi (Ecu) ECU04g1260 GI:19074204 Q8SVS3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g06290
GO:0005634 nucleus C
IDA
HsaMCM3AP
SpoSPCC70.06
SPCC576.05
GO:0005635 nuclear envelope C
IDA
SpoSPCC576.05
GO:0005643 nuclear pore C
IDA
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0005730 nucleolus C
IDA
SpoSPCC70.06
GO:0005829 cytosol C
IDA
HsaMCM3AP
SpoSPCC576.05
SPCC70.06
GO:0070390 transcription export complex 2 C
IDA
SceS000002566
GO:0003674 molecular_function F
ND
AthAt3g06290
SpoSPCC70.06
SPCC576.05
GO:0003677 DNA binding F
TAS
HsaMCM3AP
GO:0005515 protein binding F
IPI
SceS000002566
GO:0000003 reproduction P
IMP
CelWBGene00017642
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000002566
GO:0002119 nematode larval development P
IMP
CelWBGene00017642
GO:0006260 DNA replication P
TAS
HsaMCM3AP
GO:0006283 transcription-coupled nucleotide-excision
repair		 P
IMP
SceS000002566
GO:0006406 mRNA export from nucleus P
IGI
SceS000002566
IMP
SceS000002566
IPI
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0006606 protein import into nucleus P
RCA
SceS000002566
TAS
HsaMCM3AP
GO:0006611 protein export from nucleus P
IGI
SceS000002566
IMP
SceS000002566
ISS
SpoSPCC70.06
SPCC576.05
GO:0007067 mitosis P
IMP
SceS000002566
GO:0008150 biological_process P
ND
AthAt3g06290
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00017642
GO:0010171 body morphogenesis P
IMP
CelWBGene00017642
GO:0017038 protein import P
RCA
SceS000002566
GO:0019915 lipid storage P
IMP
CelWBGene00017642
GO:0030029 actin filament-based process P
IGI
SceS000002566
GO:0031124 mRNA 3'-end processing P
IMP
SceS000002566
GO:0033365 protein localization in organelle P
RCA
SceS000002566
GO:0034504 protein localization in nucleus P
RCA
SceS000002566
GO:0042274 ribosomal small subunit biogenesis P
IMP
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0045184 establishment of protein localization P
RCA
SceS000002566
GO:0051170 nuclear import P
RCA
SceS000002566

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38697

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SAC3
(S000002566)		 GI:6320363 P46674
Kluyveromyces lactis (Kla) KLLA0D16775g GI:50307643
Eremothecium gossypii (Ego) AGOS_AGL173W GI:45200924


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005643 nuclear pore C
IDA
SceS000002566
GO:0070390 transcription export complex 2 C
IDA
SceS000002566
GO:0005515 protein binding F
IPI
SceS000002566
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000002566
GO:0006283 transcription-coupled nucleotide-excision
repair		 P
IMP
SceS000002566
GO:0006406 mRNA export from nucleus P
IGI
SceS000002566
IMP
SceS000002566
IPI
SceS000002566
GO:0006606 protein import into nucleus P
RCA
SceS000002566
GO:0006611 protein export from nucleus P
IGI
SceS000002566
IMP
SceS000002566
GO:0007067 mitosis P
IMP
SceS000002566
GO:0017038 protein import P
RCA
SceS000002566
GO:0030029 actin filament-based process P
IGI
SceS000002566
GO:0031124 mRNA 3'-end processing P
IMP
SceS000002566
GO:0033365 protein localization in organelle P
RCA
SceS000002566
GO:0034504 protein localization in nucleus P
RCA
SceS000002566
GO:0042274 ribosomal small subunit biogenesis P
IMP
SceS000002566
GO:0045184 establishment of protein localization P
RCA
SceS000002566
GO:0051170 nuclear import P
RCA
SceS000002566

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3213

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga9962 ENSANGP00000011819
Anopheles gambiae (Aga) aga9963 ENSANGP00000029186
Ashbya gossypii (Ago) ago4139 AGL173W
Arabidopsis thaliana (Ath) ath12703 At3g06290.1
Caenorhabditis elegans (Cel) cel6822 F20D12.2
(CE04432;
WBGene00017642)
Candida glabrata (Cgl) cgl989 CAGL0E01111g
Cryptococcus neoformans (Cne) cne3284 167.m03637
Dictyostelium discoideum (Ddi) ddi3111 DDB0217474
Debaryomyces hansenii (Dha) dha2852 DEHA0D12496g
Debaryomyces hansenii (Dha) dha2853 DEHA0D12518g
Drosophila melanogaster (Dme) dme18304 CG32562-PA
(FBgn0028974)
Danio rerio (Dre) dre23938 ENSDARP00000019686
(mcm3ap)		 Q6DRP0
Takifugu rubripes (Fru) fru5884 SINFRUP00000163443
Gallus gallus (Gga) gga21205 ENSGALP00000006945
Gallus gallus (Gga) gga21206 ENSGALP00000006946
(MCM3AP)
Homo sapiens (Hsa) hsa21094 ENSP00000291688
(MCM3AP)		 O60318
Kluyveromyces lactis (Kla) kla2800 KLLA0D16775g
Mus musculus (Mmu) mmu2365 ENSMUSP00000001178
(MGI:1930089)		 Q7TS87
Neurospora crassa (Ncr) ncr1248 NCU01288.2
Oryza sativa (Osa) osa54111 6057.m00134
Rattus norvegicus (Rno) rno17745 ENSRNOP00000001715
(RGD:1306834)
Saccharomyces cerevisiae (Sce) sce1197 YDR159W
(S000002566)
Schizosaccharomyces pombe (Spo) spo3180 SPCC576.05 O74889
Schizosaccharomyces pombe (Spo) spo3181 SPCC70.06 Q9USI4
Yarrowia lipolytica (Yli) yli6503 YALI0F27775g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g06290
DmeFBgn0028974
GO:0005634 nucleus C
IDA
MmuMGI:1930089
SpoSPCC70.06
SPCC576.05
GO:0005635 nuclear envelope C
IDA
SpoSPCC576.05
GO:0005643 nuclear pore C
IDA
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0005730 nucleolus C
IDA
SpoSPCC70.06
GO:0005737 cytoplasm C
IDA
MmuMGI:1930089
GO:0005829 cytosol C
IDA
SpoSPCC576.05
SPCC70.06
GO:0070390 transcription export complex 2 C
IDA
SceS000002566
GO:0003674 molecular_function F
ND
AthAt3g06290
SpoSPCC70.06
SPCC576.05
GO:0003729 mRNA binding F
NAS
DmeFBgn0028974
GO:0005515 protein binding F
IPI
SceS000002566
GO:0000003 reproduction P
IMP
CelWBGene00017642
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000002566
GO:0002119 nematode larval development P
IMP
CelWBGene00017642
GO:0006283 transcription-coupled nucleotide-excision
repair		 P
IMP
SceS000002566
GO:0006406 mRNA export from nucleus P
IGI
SceS000002566
IMP
SceS000002566
IPI
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0006606 protein import into nucleus P
RCA
SceS000002566
GO:0006611 protein export from nucleus P
IGI
SceS000002566
IMP
SceS000002566
ISS
SpoSPCC70.06
SPCC576.05
GO:0007067 mitosis P
IMP
SceS000002566
GO:0007283 spermatogenesis P
NAS
DmeFBgn0028974
GO:0008150 biological_process P
ND
AthAt3g06290
GO:0009790 embryo development P
NAS
DmeFBgn0028974
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00017642
GO:0010171 body morphogenesis P
IMP
CelWBGene00017642
GO:0016973 poly(A)+ mRNA export from nucleus P
IMP
DmeFBgn0028974
GO:0017038 protein import P
RCA
SceS000002566
GO:0019915 lipid storage P
IMP
CelWBGene00017642
GO:0030029 actin filament-based process P
IGI
SceS000002566
GO:0031124 mRNA 3'-end processing P
IMP
SceS000002566
GO:0033365 protein localization in organelle P
RCA
SceS000002566
GO:0034504 protein localization in nucleus P
RCA
SceS000002566
GO:0042274 ribosomal small subunit biogenesis P
IMP
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0045184 establishment of protein localization P
RCA
SceS000002566
GO:0048477 oogenesis P
NAS
DmeFBgn0028974
GO:0051170 nuclear import P
RCA
SceS000002566

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC70.06
(Q9USI4)		 YDR159W
(S000002566)
SPCC576.05
(O74889)		 YDR159W
(S000002566)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC70.06
SPCC576.05
GO:0005635 nuclear envelope C
IDA
SpoSPCC576.05
GO:0005643 nuclear pore C
IDA
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0005730 nucleolus C
IDA
SpoSPCC70.06
GO:0005829 cytosol C
IDA
SpoSPCC576.05
SPCC70.06
GO:0070390 transcription export complex 2 C
IDA
SceS000002566
GO:0003674 molecular_function F
ND
SpoSPCC70.06
SPCC576.05
GO:0005515 protein binding F
IPI
SceS000002566
GO:0000054 ribosomal subunit export from nucleus P
RCA
SceS000002566
GO:0006283 transcription-coupled nucleotide-excision
repair		 P
IMP
SceS000002566
GO:0006406 mRNA export from nucleus P
IGI
SceS000002566
IMP
SceS000002566
IPI
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0006606 protein import into nucleus P
RCA
SceS000002566
GO:0006611 protein export from nucleus P
IGI
SceS000002566
IMP
SceS000002566
ISS
SpoSPCC70.06
SPCC576.05
GO:0007067 mitosis P
IMP
SceS000002566
GO:0017038 protein import P
RCA
SceS000002566
GO:0030029 actin filament-based process P
IGI
SceS000002566
GO:0031124 mRNA 3'-end processing P
IMP
SceS000002566
GO:0033365 protein localization in organelle P
RCA
SceS000002566
GO:0034504 protein localization in nucleus P
RCA
SceS000002566
GO:0042274 ribosomal small subunit biogenesis P
IMP
SceS000002566
ISS
SpoSPCC576.05
SPCC70.06
GO:0045184 establishment of protein localization P
RCA
SceS000002566
GO:0051170 nuclear import P
RCA
SceS000002566

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk