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Search term: YDR163W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CWC15
SGD link S000002570
Alternative ID YDR163W
Description Non-essential protein involved in pre-mRNA splicing, component of a complex containing Cef1p; has similarity to S. pombe Cwf15p
Synonyms YDR163W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3228 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g13200 GI:18399903
Caenorhabditis elegans (Cel) CE16380
(WBGene00011687)		 GI:17564200 O45766
Drosophila melanogaster (Dme) 7291050 GI:7021369
Homo sapiens (Hsa) Hs7705475 GI:7705475
Saccharomyces cerevisiae (Sce) YDR163w
(S000002570)		 GI:6320367 Q03772
Schizosaccharomyces pombe (Spo) SPBC337.06c GI:19112199 P78794


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC337.06c
GO:0005681 spliceosomal complex C
IDA
SpoSPBC337.06c
GO:0005684 U2-type spliceosomal complex C
IDA
SceS000002570
GO:0003674 molecular_function F
ND
AthAt3g13200
SceS000002570
GO:0003723 RNA binding F
IDA
SpoSPBC337.06c
GO:0000398 nuclear mRNA splicing, via spliceosome P
IGI
SceS000002570
IPI
SpoSPBC337.06c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00011687
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00011687

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
48631

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) CWC15
(S000002570)		 GI:6320367 Q03772
Kluyveromyces lactis (Kla) KLLA0D16896g GI:50307655


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005684 U2-type spliceosomal complex C
IDA
SceS000002570
GO:0003674 molecular_function F
ND
SceS000002570
GO:0000398 nuclear mRNA splicing, via spliceosome P
IGI
SceS000002570

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_31471

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4144 AGL168W
Candida glabrata (Cgl) cgl985 CAGL0E01023g
Kluyveromyces lactis (Kla) kla2806 KLLA0D16896g
Saccharomyces cerevisiae (Sce) sce1201 YDR163W
(S000002570)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005684 U2-type spliceosomal complex C
IDA
SceS000002570
GO:0003674 molecular_function F
ND
SceS000002570
GO:0000398 nuclear mRNA splicing, via spliceosome P
IGI
SceS000002570

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC337.06c
(P78794)		 YDR163W
(S000002570)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC337.06c
GO:0005681 spliceosomal complex C
IDA
SpoSPBC337.06c
GO:0005684 U2-type spliceosomal complex C
IDA
SceS000002570
GO:0003674 molecular_function F
ND
SceS000002570
GO:0003723 RNA binding F
IDA
SpoSPBC337.06c
GO:0000398 nuclear mRNA splicing, via spliceosome P
IGI
SceS000002570
IPI
SpoSPBC337.06c

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s.khadayate@ucl.ac.uk