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Search term: YDR165W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRM82
SGD link S000002572
Alternative ID YDR165W
Description Subunit of a tRNA methyltransferase complex composed of Trm8p and Trm82p that catalyzes 7-methylguanosine modification of tRNA
Synonyms YDR165W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3914 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED WD repeat protein WDR4

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g03110 GI:4587566
Caenorhabditis elegans (Cel) CE07574
(WBGene00022420)
GI:17556659 Q23232
Drosophila melanogaster (Dme) 7290698 GI:7290698
Homo sapiens (Hsa) Hs16445428
(WDR4)
GI:16445428 P57081
Homo sapiens (Hsa) Hs16445432 GI:16445432
Saccharomyces cerevisiae (Sce) YDR165w
(S000002572)
GI:6320369 Q03774
Schizosaccharomyces pombe (Spo) SPCC18.13 GI:19075892 O74863


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g03110
GO:0005634 nucleus C
IDA
HsaWDR4
SceS000002572
SpoSPCC18.13
ISS
SpoSPCC18.13
GO:0005654 nucleoplasm C
IDA
HsaWDR4
GO:0005737 cytoplasm C
IDA
HsaWDR4
GO:0005829 cytosol C
IDA
SpoSPCC18.13
GO:0043234 protein complex C
ISS
SpoSPCC18.13
GO:0000166 nucleotide binding F
ISS
AthAt1g03110
GO:0003674 molecular_function F
ND
SpoSPCC18.13
GO:0005515 protein binding F
IPI
HsaWDR4
SceS000002572
GO:0008176 tRNA (guanine-N7-)-methyltransferase
activity
F
IDA
HsaWDR4
SceS000002572
IMP
SceS000002572
GO:0006400 tRNA modification P
IDA
HsaWDR4
GO:0008150 biological_process P
ND
AthAt1g03110
GO:0009451 RNA modification P
RCA
SceS000002572
GO:0030488 tRNA methylation P
IDA
SceS000002572
IMP
SceS000002572
ISS
SpoSPCC18.13

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
25886

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) TRM82
(S000002572)
GI:6320369 Q03774
Kluyveromyces lactis (Kla) KLLA0D17116g GI:50307675
Eremothecium gossypii (Ego) AGOS_AGL159W GI:45200938


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002572
GO:0005515 protein binding F
IPI
SceS000002572
GO:0008176 tRNA (guanine-N7-)-methyltransferase
activity
F
IDA
SceS000002572
IMP
SceS000002572
GO:0009451 RNA modification P
RCA
SceS000002572
GO:0030488 tRNA methylation P
IDA
SceS000002572
IMP
SceS000002572

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2940

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga3488 ENSANGP00000016827
Ashbya gossypii (Ago) ago4153 AGL159W
Arabidopsis thaliana (Ath) ath248 At1g03110.1
Caenorhabditis elegans (Cel) cel17431 Y102E9.2
(CE07574;
WBGene00022420)
Candida glabrata (Cgl) cgl983 CAGL0E00979g
Cryptococcus neoformans (Cne) cne4323 177.m03078
Dictyostelium discoideum (Ddi) ddi4581 DDB0203986
Debaryomyces hansenii (Dha) dha4056 DEHA0E18414g
Drosophila melanogaster (Dme) dme16703 CG15897-PA
(FBgn0029857)
Danio rerio (Dre) dre2270 ENSDARP00000004225
Danio rerio (Dre) dre2269 ENSDARP00000015494
Danio rerio (Dre) dre2271 ENSDARP00000034689
Takifugu rubripes (Fru) fru9494 SINFRUP00000138163
Gallus gallus (Gga) gga2204 ENSGALP00000026040
(WDR4)
Gallus gallus (Gga) gga2205 ENSGALP00000026041
Gallus gallus (Gga) gga2206 ENSGALP00000026042
Homo sapiens (Hsa) hsa20984 ENSP00000291541
Homo sapiens (Hsa) hsa20983 ENSP00000328671
(WDR4)
P57081-1
Kluyveromyces lactis (Kla) kla2816 KLLA0D17116g
Mus musculus (Mmu) mmu11354 ENSMUSP00000024837
(MGI:1889002)
Q9EP82
Neurospora crassa (Ncr) ncr7211 NCU07409.2
Oryza sativa (Osa) osa1297 1477.m00141
Rattus norvegicus (Rno) rno17679 ENSRNOP00000001563
(RGD:1585179)
Saccharomyces cerevisiae (Sce) sce1203 YDR165W
(S000002572)
Schizosaccharomyces pombe (Spo) spo4959 SPCC18.13 O74863
Yarrowia lipolytica (Yli) yli4061 YALI0E04785g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g03110
GO:0005634 nucleus C
IDA
DmeFBgn0029857
SceS000002572
SpoSPCC18.13
ISS
SpoSPCC18.13
GO:0005829 cytosol C
IDA
SpoSPCC18.13
GO:0043234 protein complex C
ISS
SpoSPCC18.13
GO:0000166 nucleotide binding F
ISS
AthAt1g03110
GO:0003674 molecular_function F
ND
SpoSPCC18.13
GO:0005515 protein binding F
IPI
SceS000002572
GO:0008176 tRNA (guanine-N7-)-methyltransferase
activity
F
IDA
SceS000002572
IMP
SceS000002572
GO:0007283 spermatogenesis P
IMP
DmeFBgn0029857
GO:0008150 biological_process P
ND
AthAt1g03110
GO:0009451 RNA modification P
RCA
SceS000002572
GO:0030488 tRNA methylation P
IDA
SceS000002572
IMP
SceS000002572
ISS
SpoSPCC18.13
GO:0048477 oogenesis P
IMP
DmeFBgn0029857

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC18.13
(O74863)
YDR165W
(S000002572)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002572
SpoSPCC18.13
ISS
SpoSPCC18.13
GO:0005829 cytosol C
IDA
SpoSPCC18.13
GO:0043234 protein complex C
ISS
SpoSPCC18.13
GO:0003674 molecular_function F
ND
SpoSPCC18.13
GO:0005515 protein binding F
IPI
SceS000002572
GO:0008176 tRNA (guanine-N7-)-methyltransferase
activity
F
IDA
SceS000002572
IMP
SceS000002572
GO:0009451 RNA modification P
RCA
SceS000002572
GO:0030488 tRNA methylation P
IDA
SceS000002572
IMP
SceS000002572
ISS
SpoSPCC18.13

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