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Search term: YDR225W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name HTA1
SGD link S000002633
Alternative ID YDR225W
Description Histone H2A, core histone protein required for chromatin assembly and chromosome function; one of two nearly identical subtypes (see also HTA2); DNA damage-dependent phosphorylation by Mec1p facilitates DNA repair; acetylated by Nat4p
Synonyms YDR225W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1756 AC-HYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Histone 2A

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g08880 GI:15223948
Arabidopsis thaliana (Ath) At1g51060 GI:15223708
Arabidopsis thaliana (Ath) At1g54690 GI:15221875
Arabidopsis thaliana (Ath) At3g20670 GI:15232330
Arabidopsis thaliana (Ath) At4g27230 GI:15237024
Arabidopsis thaliana (Ath) At5g02560 GI:15241857
Arabidopsis thaliana (Ath) At5g27670 GI:15241016
Arabidopsis thaliana (Ath) At5g54640 GI:15239697
Arabidopsis thaliana (Ath) At5g59870 GI:15238549
Caenorhabditis elegans (Cel) CE03848
(WBGene00014240)
GI:17544704 Q23429
Caenorhabditis elegans (Cel) CE04501A GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501B GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501C GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501D GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501E GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501F GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501G GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501H GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501I GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501J GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501K GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501L GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501M GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501N GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501O GI:17509201 P09588
Caenorhabditis elegans (Cel) CE04501P GI:17509201 P09588
Caenorhabditis elegans (Cel) CE05477
(WBGene00001909)
GI:17562014 Q27485
Homo sapiens (Hsa) Hs10645195
(HIST1H2AE)
GI:10645195 P04908
Homo sapiens (Hsa) Hs10800130
(HIST1H2AD)
GI:10800130 P20671
Homo sapiens (Hsa) Hs10800144
(HIST1H2AJ)
GI:10800144 Q99878
Homo sapiens (Hsa) Hs15617199
(HIST3H2A)
GI:15617199 Q7L7L0
Homo sapiens (Hsa) Hs16158282 GI:16158282
Homo sapiens (Hsa) Hs17437959 GI:17437959
Homo sapiens (Hsa) Hs17475673 GI:17475673
Homo sapiens (Hsa) Hs18105045
(HIST1H2AH)
GI:18105045 Q96KK5
Homo sapiens (Hsa) Hs18545931 GI:18545931
Homo sapiens (Hsa) Hs20336746_1 GI:20336746 O75367
Homo sapiens (Hsa) Hs20336748_1 GI:20336748
Homo sapiens (Hsa) Hs20555882 GI:20555882
Homo sapiens (Hsa) Hs22056183 GI:22056183
Homo sapiens (Hsa) Hs22057475 GI:22057475
Homo sapiens (Hsa) Hs22060699 GI:22060699
Homo sapiens (Hsa) Hs22060721 GI:1568545 Q92646
Homo sapiens (Hsa) Hs4504239
(HIST1H2AI)
GI:4504239 P0C0S8
Homo sapiens (Hsa) Hs4504245
(HIST1H2AC)
GI:4504245 Q93077
Homo sapiens (Hsa) Hs4504251
(HIST2H2AA3)
GI:4504251 Q6FI13
Homo sapiens (Hsa) Hs4504253
(H2AFX)
GI:4504253 P16104
Homo sapiens (Hsa) Hs4758496_1 GI:4758496 O75367
Homo sapiens (Hsa) Hs8922758 GI:8922758
Homo sapiens (Hsa) Hs8923920_1
(H2AFY2)
GI:8923920 Q9HA11
Saccharomyces cerevisiae (Sce) YBL003c
(S000000099)
GI:6319470 P04912
Saccharomyces cerevisiae (Sce) YDR225w
(S000002633)
GI:6320431 P04911
Schizosaccharomyces pombe (Spo) SPAC19G12.06c GI:19115333 P04910
Schizosaccharomyces pombe (Spo) SPCC622.08c GI:19075680 P04909
Encephalitozoon cuniculi (Ecu) ECU02g0720 GI:19073992 Q8SSG3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IDA
HsaH2AFX
GO:0000786 nucleosome C
NAS
HsaHIST1H2AC
H2AFX
HIST1H2AD
HIST1H2AJ
GO:0000788 nuclear nucleosome C
TAS
SceS000002633
S000000099
GO:0001740 Barr body C
IDA
HsaH2AFY2
GO:0005618 cell wall C
IDA
AthAt1g51060
GO:0005634 nucleus C
IDA
AthAt1g08880
At4g27230
At1g54690
HsaH2AFX
SpoSPAC19G12.06c
GO:0005654 nucleoplasm C
EXP
HsaH2AFX
RCA
SceS000002633
GO:0005730 nucleolus C
IDA
AthAt1g51060
At1g54690
At5g27670
At5g54640
At5g59870
GO:0031298 replication fork protection complex C
IDA
SceS000000099
S000002633
GO:0044451 nucleoplasm part C
RCA
SceS000002633
GO:0003677 DNA binding F
ISS
AthAt1g08880
At1g51060
At1g54690
At3g20670
At5g02560
At4g27230
At5g54640
At5g27670
At5g59870
NAS
HsaHIST1H2AD
HIST1H2AJ
HIST1H2AC
H2AFX
TAS
SceS000000099
S000002633
GO:0005515 protein binding F
IPI
HsaH2AFX
GO:0019899 enzyme binding F
IPI
HsaH2AFX
GO:0042393 histone binding F
IPI
HsaH2AFX
GO:0000077 DNA damage checkpoint P
IDA
HsaH2AFX
GO:0006281 DNA repair P
IMP
SceS000000099
S000002633
GO:0006302 double-strand break repair P
NAS
HsaH2AFX
GO:0006323 DNA packaging P
RCA
SceS000002633
GO:0006333 chromatin assembly or disassembly P
TAS
SceS000000099
S000002633
GO:0006334 nucleosome assembly P
NAS
HsaHIST1H2AC
HIST1H2AD
HIST1H2AJ
H2AFX
GO:0006974 response to DNA damage stimulus P
IDA
HsaH2AFX
GO:0006975 DNA damage induced protein phosphorylation P
IMP
SpoSPAC19G12.06c
SPCC622.08c
GO:0007549 dosage compensation P
IDA
HsaH2AFY2
GO:0007569 cell aging P
IEP
HsaH2AFX
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00014240
GO:0009294 DNA mediated transformation P
IMP
AthAt5g54640
GO:0009611 response to wounding P
IEP
AthAt5g54640
GO:0009617 response to bacterium P
IEP
AthAt5g54640
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00001909
GO:0010212 response to ionizing radiation P
NAS
HsaH2AFX
GO:0042770 DNA damage response, signal transduction P
IMP
SpoSPAC19G12.06c
SPCC622.08c
GO:0045739 positive regulation of DNA repair P
NAS
HsaH2AFX
GO:0045816 negative regulation of transcription from RNA
polymerase II promoter, global
P
IMP
SceS000002633
GO:0065007 biological regulation P
NAS
SpoSPAC19G12.06c
SPCC622.08c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
115922

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) H2AFX GI:4504253 P16104
Pan troglodytes (Ptr) H2AFJ GI:114643719
Canis familiaris (Cfa) LOC489372 GI:73955042
Mus musculus (Mmu) H2afx
(MGI:102688)
GI:7106331 P27661
Rattus norvegicus (Rno) H2afx
(RGD:735124)
GI:109483394
Schizosaccharomyces pombe (Spo) hta2
(SPAC19G12.06c)
GI:19115333 P04910
Schizosaccharomyces pombe (Spo) hta1
(SPCC622.08c)
GI:19075680 P04909
Saccharomyces cerevisiae (Sce) HTA2
(S000000099)
GI:6319470 P04912
Saccharomyces cerevisiae (Sce) HTA1
(S000002633)
GI:6320431 P04911
Kluyveromyces lactis (Kla) KLLA0E17413g GI:50309449
Kluyveromyces lactis (Kla) KLLA0F13332g GI:50311311
Eremothecium gossypii (Ego) AGOS_AGR184W GI:45201280
Eremothecium gossypii (Ego) AGOS_AEL003C GI:45190604
Magnaporthe grisea (Mgr) MGG_03577 GI:39942994
Neurospora crassa (Ncr) NCU02437.1 GI:32421539
Arabidopsis thaliana (Ath) GAMMA-H2AX GI:15221875
Arabidopsis thaliana (Ath) H2AXA GI:15223948
Oryza sativa (Osa) Os03g0721900 GI:115455011
Oryza sativa (Osa) Os12g0530000 GI:115488866


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000781 chromosome, telomeric region C
IDA
HsaH2AFX
GO:0000785 chromatin C
IDA
MmuMGI:102688
GO:0000786 nucleosome C
NAS
HsaH2AFX
GO:0000788 nuclear nucleosome C
TAS
SceS000002633
S000000099
GO:0000790 nuclear chromatin C
IDA
MmuMGI:102688
GO:0001673 male germ cell nucleus C
IDA
MmuMGI:102688
GO:0001741 XY body C
IDA
MmuMGI:102688
GO:0005634 nucleus C
IDA
AthGAMMA-H2AX
H2AXA
HsaH2AFX
MmuMGI:102688
SpoSPAC19G12.06c
ISO
MmuMGI:102688
GO:0005654 nucleoplasm C
EXP
HsaH2AFX
RCA
SceS000002633
GO:0005657 replication fork C
IDA
MmuMGI:102688
GO:0005730 nucleolus C
IDA
AthGAMMA-H2AX
GO:0031298 replication fork protection complex C
IDA
SceS000000099
S000002633
GO:0044451 nucleoplasm part C
RCA
SceS000002633
GO:0003677 DNA binding F
ISS
AthGAMMA-H2AX
H2AXA
NAS
HsaH2AFX
TAS
SceS000000099
S000002633
GO:0003684 damaged DNA binding F
IDA
MmuMGI:102688
GO:0005515 protein binding F
IPI
HsaH2AFX
MmuMGI:102688
GO:0019899 enzyme binding F
IPI
HsaH2AFX
GO:0042393 histone binding F
IPI
HsaH2AFX
GO:0000077 DNA damage checkpoint P
IDA
HsaH2AFX
GO:0000724 double-strand break repair via homologous
recombination
P
IMP
MmuMGI:102688
GO:0006281 DNA repair P
IDA
MmuMGI:102688
IMP
MmuMGI:102688
SceS000000099
S000002633
GO:0006302 double-strand break repair P
NAS
HsaH2AFX
GO:0006323 DNA packaging P
RCA
SceS000002633
GO:0006333 chromatin assembly or disassembly P
TAS
SceS000000099
S000002633
GO:0006334 nucleosome assembly P
NAS
HsaH2AFX
GO:0006974 response to DNA damage stimulus P
IDA
HsaH2AFX
GO:0006975 DNA damage induced protein phosphorylation P
IMP
SpoSPAC19G12.06c
SPCC622.08c
GO:0007283 spermatogenesis P
IMP
MmuMGI:102688
GO:0007569 cell aging P
IEP
HsaH2AFX
GO:0010212 response to ionizing radiation P
NAS
HsaH2AFX
GO:0042770 DNA damage response, signal transduction P
IMP
SpoSPAC19G12.06c
SPCC622.08c
GO:0045739 positive regulation of DNA repair P
NAS
HsaH2AFX
GO:0045816 negative regulation of transcription from RNA
polymerase II promoter, global
P
IMP
SceS000002633
GO:0065007 biological regulation P
NAS
SpoSPAC19G12.06c
SPCC622.08c

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