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Search term: YDR240C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SNU56
SGD link S000002648
Alternative ID YDR240C
Description Component of U1 snRNP required for mRNA splicing via spliceosome; yeast specific, no metazoan counterpart; interacts with mRNA in commitment complex
Synonyms YDR240C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38737

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SNU56
(S000002648)		 GI:6320447
Kluyveromyces lactis (Kla) KLLA0C15323g GI:50305853
Eremothecium gossypii (Ego) AGOS_ABL114W GI:45185116


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000243 commitment complex C
IPI
SceS000002648
GO:0005685 U1 snRNP C
IDA
SceS000002648
GO:0071004 U2-type prespliceosome C
IDA
SceS000002648
GO:0003729 mRNA binding F
IPI
SceS000002648
GO:0000398 nuclear mRNA splicing, via spliceosome P
IPI
SceS000002648

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_31415

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago478 ABL114W
Candida glabrata (Cgl) cgl3997 CAGL0K11132g
Kluyveromyces lactis (Kla) kla1886 KLLA0C15323g
Saccharomyces cerevisiae (Sce) sce1288 YDR240C
(S000002648)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000243 commitment complex C
IPI
SceS000002648
GO:0005685 U1 snRNP C
IDA
SceS000002648
GO:0071004 U2-type prespliceosome C
IDA
SceS000002648
GO:0003729 mRNA binding F
IPI
SceS000002648
GO:0000398 nuclear mRNA splicing, via spliceosome P
IPI
SceS000002648

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