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Search term: YDR257C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RKM4
SGD link S000002665
Alternative ID YDR257C
Description Ribosomal lysine methyltransferase specific for monomethylation of Rpl42ap and Rpl42bp (lysine 55); nuclear SET-domain containing protein
Synonyms YDR257C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1338 A--HYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g55080 GI:15233172
Homo sapiens (Hsa) Hs13376288
(SETD6)		 GI:13376288
Saccharomyces cerevisiae (Sce) YDR257c
(S000002665)		 GI:6320463 Q12504
Schizosaccharomyces pombe (Spo) SPAC688.14 GI:19114984 Q9P6L2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g55080
GO:0005634 nucleus C
IDA
SceS000002665
SpoSPAC688.14
GO:0003674 molecular_function F
ND
AthAt3g55080
GO:0016279 protein-lysine N-methyltransferase
activity		 F
IDA
SpoSPAC688.14
IGI
SceS000002665
IMP
SceS000002665
GO:0006479 protein amino acid methylation P
IDA
SpoSPAC688.14
GO:0008150 biological_process P
ND
AthAt3g55080
GO:0018022 peptidyl-lysine methylation P
IDA
SpoSPAC688.14
GO:0018026 peptidyl-lysine monomethylation P
IGI
SceS000002665
IMP
SceS000002665
GO:0043555 regulation of translation in response to
stress		 P
IMP
SpoSPAC688.14

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
117773

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SET7 GI:6320463 Q12504
Kluyveromyces lactis (Kla) KLLA0A07084g GI:50302755
Eremothecium gossypii (Ego) AGOS_AEL225C GI:45190382


GO terms for Homologene results:

None found.

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3209

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago381 AAR193C
Ashbya gossypii (Ago) ago2281 AEL225C
Arabidopsis thaliana (Ath) ath17048 At3g56570.1
Candida glabrata (Cgl) cgl390 CAGL0B04279g
Candida glabrata (Cgl) cgl5040 CAGL0M08844g
Cryptococcus neoformans (Cne) cne4821 186.m03697
Dictyostelium discoideum (Ddi) ddi1605 DDB0167139
Debaryomyces hansenii (Dha) dha739 DEHA0B01342g
Debaryomyces hansenii (Dha) dha3845 DEHA0E13662g
Danio rerio (Dre) dre29993 ENSDARP00000017780
Gallus gallus (Gga) gga4452 ENSGALP00000003511
Gallus gallus (Gga) gga4453 ENSGALP00000003512
(SETD6)		 Q5ZK17
Homo sapiens (Hsa) hsa12280 ENSP00000219315
(SETD6)		 Q8TBK2-1
Homo sapiens (Hsa) hsa12281 ENSP00000310082
(SETD6)		 Q8TBK2-2
Kluyveromyces lactis (Kla) kla311 KLLA0A07084g
Kluyveromyces lactis (Kla) kla847 KLLA0B07161g
Mus musculus (Mmu) mmu26496 ENSMUSP00000034096
(MGI:1913333)		 Q9CWY3
Neurospora crassa (Ncr) ncr9571 NCU09827.2
Oryza sativa (Osa) osa47530 5644.m00207
Oryza sativa (Osa) osa47963 5798.m00146
Rattus norvegicus (Rno) rno14538 ENSRNOP00000016626
(RGD:1560538)
Saccharomyces cerevisiae (Sce) sce283 YBR030W
(S000000234)
Saccharomyces cerevisiae (Sce) sce1306 YDR257C
(S000002665)
Schizosaccharomyces pombe (Spo) spo1249 SPAC688.14 Q9P6L2
Schizosaccharomyces pombe (Spo) spo1142 SPBC16C6.01c O42925
Yarrowia lipolytica (Yli) yli1092 YALI0B08624g
Yarrowia lipolytica (Yli) yli6516 YALI0F28061g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g56570
MmuMGI:1913333
GO:0005634 nucleus C
IDA
SceS000002665
S000000234
SpoSPAC688.14
SPBC16C6.01c
GO:0005829 cytosol C
IDA
SpoSPBC16C6.01c
GO:0003674 molecular_function F
ND
AthAt3g56570
MmuMGI:1913333
GO:0016279 protein-lysine N-methyltransferase
activity		 F
IDA
SpoSPAC688.14
IGI
SceS000000234
S000002665
IMP
SceS000002665
S000000234
ISS
SpoSPBC16C6.01c
GO:0006479 protein amino acid methylation P
IDA
SpoSPAC688.14
ISS
SpoSPBC16C6.01c
GO:0008150 biological_process P
ND
AthAt3g56570
MmuMGI:1913333
GO:0018022 peptidyl-lysine methylation P
IDA
SpoSPAC688.14
ISS
SpoSPBC16C6.01c
GO:0018026 peptidyl-lysine monomethylation P
IGI
SceS000002665
S000000234
IMP
SceS000002665
S000000234
GO:0043555 regulation of translation in response to
stress		 P
IMP
SpoSPAC688.14

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC688.14
(Q9P6L2)		 YDR257C
(S000002665)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000002665
SpoSPAC688.14
GO:0016279 protein-lysine N-methyltransferase
activity		 F
IDA
SpoSPAC688.14
IGI
SceS000002665
IMP
SceS000002665
GO:0006479 protein amino acid methylation P
IDA
SpoSPAC688.14
GO:0018022 peptidyl-lysine methylation P
IDA
SpoSPAC688.14
GO:0018026 peptidyl-lysine monomethylation P
IGI
SceS000002665
IMP
SceS000002665
GO:0043555 regulation of translation in response to
stress		 P
IMP
SpoSPAC688.14

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