YOGY Home YOGY Help

Search term: YDR268W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MSW1
SGD link S000002676
Alternative ID YDR268W
Description Mitochondrial tryptophanyl-tRNA synthetase
Synonyms YDR268W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2713 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Mitochondrial tryptophanyl-tRNA synthetase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g25840 GI:15225201
Caenorhabditis elegans (Cel) CE29032_2 GI:17552466
Drosophila melanogaster (Dme) 7293931 GI:7293931
Homo sapiens (Hsa) Hs7710154
(WARS2)		 GI:7710154 Q9UGM6
Saccharomyces cerevisiae (Sce) YDR268w
(S000002676)		 GI:6320474 P04803
Schizosaccharomyces pombe (Spo) SPAC3G9.13c GI:19114997 O42875


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt2g25840
SceS000002676
SpoSPAC3G9.13c
IMP
SceS000002676
ISS
SpoSPAC3G9.13c
GO:0005759 mitochondrial matrix C
EXP
HsaWARS2
GO:0009507 chloroplast C
IDA
AthAt2g25840
GO:0004812 aminoacyl-tRNA ligase activity F
ISS
AthAt2g25840
GO:0004830 tryptophan-tRNA ligase activity F
EXP
HsaWARS2
IMP
SceS000002676
ISA
SceS000002676
ISS
SpoSPAC3G9.13c
GO:0005524 ATP binding F
ISS
AthAt2g25840
SpoSPAC3G9.13c
GO:0042803 protein homodimerization activity F
NAS
SpoSPAC3G9.13c
GO:0006414 translational elongation P
RCA
SceS000002676
GO:0006418 tRNA aminoacylation for protein
translation		 P
ISS
AthAt2g25840
GO:0006436 tryptophanyl-tRNA aminoacylation P
ISS
SpoSPAC3G9.13c
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00006946
GO:0032543 mitochondrial translation P
NAS
SpoSPAC3G9.13c
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00006946
GO:0048481 ovule development P
IMP
AthAt2g25840
GO:0070183 mitochondrial tryptophanyl-tRNA
aminoacylation		 P
IMP
SceS000002676

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5673

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) WARS2 GI:7710154 Q9UGM6
Pan troglodytes (Ptr) WARS2 GI:55587830
Canis familiaris (Cfa) WARS2 GI:73981244
Mus musculus (Mmu) Wars2
(MGI:1917810)		 GI:31543952 Q8BFV8
Rattus norvegicus (Rno) Wars2 GI:109465328
Gallus gallus (Gga) WARS2 GI:118083413
Drosophila melanogaster (Dme) CG7441
(FBgn0036763)		 GI:24666151
Anopheles gambiae (Aga) AgaP_AGAP011744 GI:158300980
Caenorhabditis elegans (Cel) wrs-2
(CE29032;
WBGene00006946)		 GI:71982800
Schizosaccharomyces pombe (Spo) msw1
(SPAC3G9.13c)		 GI:19114997 O42875
Saccharomyces cerevisiae (Sce) MSW1
(S000002676)		 GI:6320474 P04803
Kluyveromyces lactis (Kla) KLLA0E21923g GI:50309851
Eremothecium gossypii (Ego) AGOS_ACR089C GI:45185775
Magnaporthe grisea (Mgr) MGG_00475 GI:145611320
Neurospora crassa (Ncr) NCU00113.1 GI:32403172


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
MmuMGI:1917810
SceS000002676
SpoSPAC3G9.13c
IMP
SceS000002676
ISS
SpoSPAC3G9.13c
GO:0005759 mitochondrial matrix C
EXP
HsaWARS2
GO:0003674 molecular_function F
ND
MmuMGI:1917810
GO:0004830 tryptophan-tRNA ligase activity F
EXP
HsaWARS2
IMP
SceS000002676
ISA
SceS000002676
ISS
DmeFBgn0036763
SpoSPAC3G9.13c
GO:0005524 ATP binding F
ISS
SpoSPAC3G9.13c
GO:0042803 protein homodimerization activity F
NAS
SpoSPAC3G9.13c
GO:0001570 vasculogenesis P
IDA
MmuMGI:1917810
GO:0006414 translational elongation P
RCA
SceS000002676
GO:0006436 tryptophanyl-tRNA aminoacylation P
ISS
SpoSPAC3G9.13c
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00006946
GO:0032543 mitochondrial translation P
NAS
SpoSPAC3G9.13c
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00006946
GO:0070183 mitochondrial tryptophanyl-tRNA
aminoacylation		 P
IMP
SceS000002676

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_909

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8886 ENSANGP00000014171
Ashbya gossypii (Ago) ago1136 ACR089C
Arabidopsis thaliana (Ath) ath9507 At2g25840.1
Arabidopsis thaliana (Ath) ath9508 At2g25840.2
Arabidopsis thaliana (Ath) ath9509 At2g25840.3
Caenorhabditis elegans (Cel) cel3415 C34E10.4a
(CE29032;
WBGene00006946)
Caenorhabditis elegans (Cel) cel3416 C34E10.4b
(CE37710)
Candida glabrata (Cgl) cgl5030 CAGL0M08624g
Dictyostelium discoideum (Ddi) ddi11668 DDB0231246
Debaryomyces hansenii (Dha) dha6098 DEHA0G08877g
Drosophila melanogaster (Dme) dme10045 CG7441-PA
(FBgn0036763)
Danio rerio (Dre) dre18958 ENSDARP00000002988
Danio rerio (Dre) dre18957 ENSDARP00000010571
(LOC554493)
Escherichia coli (Eco) eco3265 16131262
Takifugu rubripes (Fru) fru11619 SINFRUP00000176622
Gallus gallus (Gga) gga1652 ENSGALP00000023788
(WARS2)
Homo sapiens (Hsa) hsa1807 ENSP00000235521
(WARS2)		 Q9UGM6
Kluyveromyces lactis (Kla) kla3938 KLLA0E21923g
Mus musculus (Mmu) mmu17236 ENSMUSP00000004343
(MGI:1917810)		 Q8BFV8
Mus musculus (Mmu) mmu17237 ENSMUSP00000075894
Neurospora crassa (Ncr) ncr111 NCU00113.2
Oryza sativa (Osa) osa32909 4621.m00171
Oryza sativa (Osa) osa32922 4621.m00218
Plasmodium falciparum (Pfa) pfa5278 PFL2485c
Rattus norvegicus (Rno) rno16698 ENSRNOP00000026458
(RGD:1593417)
Saccharomyces cerevisiae (Sce) sce1321 YDR268W
(S000002676)
Schizosaccharomyces pombe (Spo) spo959 SPAC3G9.13c O42875
Yarrowia lipolytica (Yli) yli2456 YALI0C18425g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt2g25840
MmuMGI:1917810
SceS000002676
SpoSPAC3G9.13c
IMP
SceS000002676
ISS
PfaPFL2485c
SpoSPAC3G9.13c
GO:0009507 chloroplast C
IDA
AthAt2g25840
GO:0020011 apicoplast C
ISS
PfaPFL2485c
GO:0003674 molecular_function F
ND
MmuMGI:1917810
GO:0004812 aminoacyl-tRNA ligase activity F
ISS
AthAt2g25840
GO:0004830 tryptophan-tRNA ligase activity F
IMP
SceS000002676
ISA
SceS000002676
ISS
DmeFBgn0036763
SpoSPAC3G9.13c
GO:0005524 ATP binding F
ISS
AthAt2g25840
SpoSPAC3G9.13c
GO:0042803 protein homodimerization activity F
NAS
SpoSPAC3G9.13c
GO:0001570 vasculogenesis P
IDA
MmuMGI:1917810
GO:0006414 translational elongation P
RCA
SceS000002676
GO:0006418 tRNA aminoacylation for protein
translation		 P
ISS
AthAt2g25840
GO:0006436 tryptophanyl-tRNA aminoacylation P
ISS
SpoSPAC3G9.13c
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00006946
GO:0032543 mitochondrial translation P
NAS
SpoSPAC3G9.13c
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00006946
GO:0048481 ovule development P
IMP
AthAt2g25840
GO:0070183 mitochondrial tryptophanyl-tRNA
aminoacylation		 P
IMP
SceS000002676

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC3G9.13c
(O42875)		 YDR268W
(S000002676)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000002676
SpoSPAC3G9.13c
IMP
SceS000002676
ISS
SpoSPAC3G9.13c
GO:0004830 tryptophan-tRNA ligase activity F
IMP
SceS000002676
ISA
SceS000002676
ISS
SpoSPAC3G9.13c
GO:0005524 ATP binding F
ISS
SpoSPAC3G9.13c
GO:0042803 protein homodimerization activity F
NAS
SpoSPAC3G9.13c
GO:0006414 translational elongation P
RCA
SceS000002676
GO:0006436 tryptophanyl-tRNA aminoacylation P
ISS
SpoSPAC3G9.13c
GO:0032543 mitochondrial translation P
NAS
SpoSPAC3G9.13c
GO:0070183 mitochondrial tryptophanyl-tRNA
aminoacylation		 P
IMP
SceS000002676

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk