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Search term: YDR299W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name BFR2
SGD link S000002707
Alternative ID YDR299W
Description Essential protein that is a component of 90S preribosomes; may be involved in rRNA processing; multicopy suppressor of sensitivity to Brefeldin A; expression is induced during lag phase and also by cold shock
Synonyms YDR299W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2773 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSINGCELLULAR PROCESSES AND SIGNALING Apoptosis antagonizing transcription factor/protein transport protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g61330 GI:15240224
Caenorhabditis elegans (Cel) CE27034 GI:17510613
Drosophila melanogaster (Dme) 7297160
(FBgn0031851)		 GI:19920846
Homo sapiens (Hsa) Hs7657013
(AATF)		 GI:7657013 Q9NY61
Saccharomyces cerevisiae (Sce) YDR299w
(S000002707)		 GI:6320505 Q06631
Schizosaccharomyces pombe (Spo) SPAC664.08c GI:19114368 Q9US05


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
HsaAATF
SpoSPAC664.08c
ISS
DmeFBgn0031851
GO:0005730 nucleolus C
IDA
SceS000002707
ISS
SpoSPAC664.08c
GO:0005737 cytoplasm C
IDA
HsaAATF
GO:0030686 90S preribosome C
IDA
SceS000002707
GO:0003674 molecular_function F
ND
AthAt5g61330
DmeFBgn0031851
SceS000002707
SpoSPAC664.08c
GO:0003700 transcription factor activity F
IDA
HsaAATF
GO:0005515 protein binding F
IPI
HsaAATF
GO:0043522 leucine zipper domain binding F
IPI
HsaAATF
GO:0006364 rRNA processing P
IMP
SceS000002707
GO:0006915 apoptosis P
EXP
HsaAATF
GO:0006916 anti-apoptosis P
IMP
HsaAATF
GO:0006974 response to DNA damage stimulus P
IEP
HsaAATF
GO:0008150 biological_process P
ND
AthAt5g61330
DmeFBgn0031851
GO:0008624 induction of apoptosis by extracellular
signals		 P
EXP
HsaAATF
GO:0010671 negative regulation of oxygen and reactive oxygen
species metabolic process		 P
IDA
HsaAATF
GO:0032929 negative regulation of superoxide anion
generation		 P
IDA
HsaAATF
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC664.08c
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
IDA
HsaAATF

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40811

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) AATF GI:7657013 Q9NY61
Pan troglodytes (Ptr) AATF GI:114667928
Canis familiaris (Cfa) AATF GI:73966710
Mus musculus (Mmu) Aatf
(MGI:1929608)		 GI:9790013 Q3URN5
Rattus norvegicus (Rno) Aatf
(RGD:620685)		 GI:16758536
Gallus gallus (Gga) AATF GI:71897031
Drosophila melanogaster (Dme) CG11188
(FBgn0031851)		 GI:19920846
Anopheles gambiae (Aga) AgaP_AGAP007394 GI:158285740
Caenorhabditis elegans (Cel) Y73E7A.2
(CE32277;
WBGene00022269)		 GI:32564121
Schizosaccharomyces pombe (Spo) SPAC664.08c GI:19114368 Q9US05
Saccharomyces cerevisiae (Sce) BFR2
(S000002707)		 GI:6320505 Q06631
Kluyveromyces lactis (Kla) KLLA0C10362g GI:50305403
Eremothecium gossypii (Ego) AGOS_AAL064W GI:45184760
Magnaporthe grisea (Mgr) MGG_04641 GI:145614536
Neurospora crassa (Ncr) NCU04787.1 GI:32407092
Arabidopsis thaliana (Ath) AT5G61330 GI:42568687
Oryza sativa (Osa) Os01g0526200 GI:115437164


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
HsaAATF
MmuMGI:1929608
SpoSPAC664.08c
ISO
MmuMGI:1929608
ISS
DmeFBgn0031851
GO:0005730 nucleolus C
IDA
MmuMGI:1929608
SceS000002707
ISS
SpoSPAC664.08c
GO:0005737 cytoplasm C
IDA
HsaAATF
MmuMGI:1929608
ISO
MmuMGI:1929608
GO:0005794 Golgi apparatus C
ISO
MmuMGI:1929608
GO:0005829 cytosol C
EXP
MmuMGI:1929608
GO:0030686 90S preribosome C
IDA
SceS000002707
GO:0003674 molecular_function F
ND
AthAt5g61330
DmeFBgn0031851
SceS000002707
SpoSPAC664.08c
GO:0003700 transcription factor activity F
IDA
HsaAATF
ISO
MmuMGI:1929608
GO:0005515 protein binding F
IPI
HsaAATF
MmuMGI:1929608
GO:0019904 protein domain specific binding F
ISO
MmuMGI:1929608
GO:0043522 leucine zipper domain binding F
IPI
HsaAATF
GO:0048156 tau protein binding F
ISO
MmuMGI:1929608
GO:0006364 rRNA processing P
IMP
SceS000002707
GO:0006915 apoptosis P
EXP
HsaAATF
GO:0006916 anti-apoptosis P
IMP
HsaAATF
GO:0006974 response to DNA damage stimulus P
IEP
HsaAATF
GO:0007155 cell adhesion P
IMP
MmuMGI:1929608
GO:0007346 regulation of mitotic cell cycle P
IMP
MmuMGI:1929608
GO:0008150 biological_process P
ND
AthAt5g61330
DmeFBgn0031851
GO:0008624 induction of apoptosis by extracellular
signals		 P
EXP
HsaAATF
GO:0010671 negative regulation of oxygen and reactive oxygen
species metabolic process		 P
IDA
HsaAATF
GO:0032929 negative regulation of superoxide anion
generation		 P
IDA
HsaAATF
GO:0040016 embryonic cleavage P
IMP
MmuMGI:1929608
GO:0042254 ribosome biogenesis P
IMP
MmuMGI:1929608
ISS
SpoSPAC664.08c
GO:0042985 negative regulation of amyloid precursor protein
biosynthetic process		 P
IDA
MmuMGI:1929608
GO:0045941 positive regulation of transcription P
ISO
MmuMGI:1929608
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
IDA
HsaAATF

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3270

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2819 ENSANGP00000017925
Ashbya gossypii (Ago) ago123 AAL064W
Arabidopsis thaliana (Ath) ath28226 At5g61330.1
Caenorhabditis elegans (Cel) cel20765 Y73E7A.2
(CE32277;
WBGene00022269)
Candida glabrata (Cgl) cgl2127 CAGL0H01419g
Cryptococcus neoformans (Cne) cne114 162.m02710
Dictyostelium discoideum (Ddi) ddi1812 DDB0201701
Debaryomyces hansenii (Dha) dha655 DEHA0A14630g
Drosophila melanogaster (Dme) dme1116 CG11188-PA
(FBgn0031851)
Danio rerio (Dre) dre19961 ENSDARP00000031013
(LOC559477)		 Q08CT2
Takifugu rubripes (Fru) fru16761 SINFRUP00000141124
Gallus gallus (Gga) gga9054 ENSGALP00000008693
(AATF)		 Q5ZIM6
Homo sapiens (Hsa) hsa13513 ENSP00000225402
(AATF)		 Q9NY61
Homo sapiens (Hsa) hsa13514 ENSP00000352723
Kluyveromyces lactis (Kla) kla1660 KLLA0C10362g
Mus musculus (Mmu) mmu4457 ENSMUSP00000018841
(MGI:1929608)		 Q9JKX4-1
Mus musculus (Mmu) mmu4458 ENSMUSP00000063233
Neurospora crassa (Ncr) ncr4650 NCU04787.2
Oryza sativa (Osa) osa33049 4624.m00138
Oryza sativa (Osa) osa37537 4984.m00163
Rattus norvegicus (Rno) rno5774 ENSRNOP00000000258
(RGD:620685)		 Q9QYW0
Saccharomyces cerevisiae (Sce) sce1352 YDR299W
(S000002707)
Schizosaccharomyces pombe (Spo) spo1294 SPAC664.08c Q9US05
Yarrowia lipolytica (Yli) yli3184 YALI0D11462g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
MmuMGI:1929608
SpoSPAC664.08c
ISO
MmuMGI:1929608
ISS
DmeFBgn0031851
GO:0005730 nucleolus C
IDA
MmuMGI:1929608
SceS000002707
ISS
SpoSPAC664.08c
GO:0005737 cytoplasm C
IDA
MmuMGI:1929608
ISO
MmuMGI:1929608
GO:0005794 Golgi apparatus C
ISO
MmuMGI:1929608
GO:0005829 cytosol C
EXP
MmuMGI:1929608
GO:0030686 90S preribosome C
IDA
SceS000002707
GO:0003674 molecular_function F
ND
AthAt5g61330
DmeFBgn0031851
SceS000002707
SpoSPAC664.08c
GO:0003700 transcription factor activity F
ISO
MmuMGI:1929608
GO:0005515 protein binding F
IPI
MmuMGI:1929608
GO:0019904 protein domain specific binding F
ISO
MmuMGI:1929608
GO:0048156 tau protein binding F
ISO
MmuMGI:1929608
GO:0006364 rRNA processing P
IMP
SceS000002707
GO:0007155 cell adhesion P
IMP
MmuMGI:1929608
GO:0007346 regulation of mitotic cell cycle P
IMP
MmuMGI:1929608
GO:0008150 biological_process P
ND
AthAt5g61330
DmeFBgn0031851
GO:0040016 embryonic cleavage P
IMP
MmuMGI:1929608
GO:0042254 ribosome biogenesis P
IMP
MmuMGI:1929608
ISS
SpoSPAC664.08c
GO:0042985 negative regulation of amyloid precursor protein
biosynthetic process		 P
IDA
MmuMGI:1929608
GO:0045941 positive regulation of transcription P
ISO
MmuMGI:1929608

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC664.08c
(Q9US05)		 YDR299W
(S000002707)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC664.08c
GO:0005730 nucleolus C
IDA
SceS000002707
ISS
SpoSPAC664.08c
GO:0030686 90S preribosome C
IDA
SceS000002707
GO:0003674 molecular_function F
ND
SceS000002707
SpoSPAC664.08c
GO:0006364 rRNA processing P
IMP
SceS000002707
GO:0042254 ribosome biogenesis P
ISS
SpoSPAC664.08c

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GO info in one table:

s.khadayate@ucl.ac.uk