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Search term: YDR392W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SPT3
SGD link S000002800
Alternative ID YDR392W
Description Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to activate transcription of some RNA polymerase II-dependent genes, also functions to inhibit transcription at some promoters
Synonyms YDR392W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3902 --DHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Histone acetyltransferase PCAF/SAGA, subunit SUPT3H/SPT3

Species KOG link NCBI link UniProt link
Drosophila melanogaster (Dme) 7299555 GI:7299555
Homo sapiens (Hsa) Hs4507309
(SUPT3H)		 GI:4507309 O75486
Saccharomyces cerevisiae (Sce) YDR392w
(S000002800)		 GI:6320600 P06844
Schizosaccharomyces pombe (Spo) SPCC61.02 GI:19075693 O14311


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000002800
ISS
SpoSPCC61.02
GO:0000785 chromatin C
NAS
SpoSPCC61.02
GO:0005634 nucleus C
IDA
HsaSUPT3H
SpoSPCC61.02
GO:0005669 transcription factor TFIID complex C
RCA
SceS000002800
GO:0005829 cytosol C
IDA
SpoSPCC61.02
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
RCA
SceS000002800
GO:0030914 STAGA complex C
IDA
HsaSUPT3H
GO:0033276 transcription factor TFTC complex C
IDA
HsaSUPT3H
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000002800
GO:0003702 RNA polymerase II transcription factor
activity		 F
RCA
SceS000002800
GO:0003712 transcription cofactor activity F
IDA
SceS000002800
IMP
SceS000002800
ISS
SpoSPCC61.02
GO:0003713 transcription coactivator activity F
IDA
HsaSUPT3H
GO:0004402 histone acetyltransferase activity F
IDA
HsaSUPT3H
GO:0016563 transcription activator activity F
NAS
HsaSUPT3H
GO:0016986 transcription initiation factor
activity		 F
NAS
HsaSUPT3H
GO:0000747 conjugation with cellular fusion P
TAS
SceS000002800
GO:0001403 invasive growth in response to glucose
limitation		 P
IDA
SceS000002800
GO:0006338 chromatin remodeling P
IC
SpoSPCC61.02
GO:0006355 regulation of transcription, DNA-dependent P
NAS
HsaSUPT3H
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
TAS
HsaSUPT3H
GO:0006366 transcription from RNA polymerase II
promoter		 P
TAS
HsaSUPT3H
GO:0006730 one-carbon metabolic process P
RCA
SceS000002800
GO:0007124 pseudohyphal growth P
IDA
SceS000002800
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000002800
GO:0016481 negative regulation of transcription P
RCA
SceS000002800
GO:0016568 chromatin modification P
IDA
SceS000002800
GO:0016573 histone acetylation P
IDA
SceS000002800
ISS
SpoSPCC61.02
GO:0016578 histone deubiquitination P
IDA
HsaSUPT3H
GO:0030437 ascospore formation P
TAS
SceS000002800
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IMP
SceS000002800
ISS
SpoSPCC61.02
GO:0043966 histone H3 acetylation P
IDA
HsaSUPT3H
GO:0045449 regulation of transcription P
ISS
SpoSPCC61.02
GO:0045941 positive regulation of transcription P
RCA
SceS000002800
GO:0051276 chromosome organization P
RCA
SceS000002800

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
122162

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) spt3
(SPCC61.02)		 GI:19075693 O14311
Saccharomyces cerevisiae (Sce) SPT3
(S000002800)		 GI:6320600 P06844
Kluyveromyces lactis (Kla) SPT3_KLULA GI:50308185
Eremothecium gossypii (Ego) AGOS_AFR388W GI:45198906
Magnaporthe grisea (Mgr) MGG_01766 GI:39952247
Neurospora crassa (Ncr) NCU07992.1 GI:32416440


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000124 SAGA complex C
IDA
SceS000002800
ISS
SpoSPCC61.02
GO:0000785 chromatin C
NAS
SpoSPCC61.02
GO:0005634 nucleus C
IDA
SpoSPCC61.02
GO:0005669 transcription factor TFIID complex C
RCA
SceS000002800
GO:0005829 cytosol C
IDA
SpoSPCC61.02
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
RCA
SceS000002800
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000002800
GO:0003702 RNA polymerase II transcription factor
activity		 F
RCA
SceS000002800
GO:0003712 transcription cofactor activity F
IDA
SceS000002800
IMP
SceS000002800
ISS
SpoSPCC61.02
GO:0000747 conjugation with cellular fusion P
TAS
SceS000002800
GO:0001403 invasive growth in response to glucose
limitation		 P
IDA
SceS000002800
GO:0006338 chromatin remodeling P
IC
SpoSPCC61.02
GO:0006730 one-carbon metabolic process P
RCA
SceS000002800
GO:0007124 pseudohyphal growth P
IDA
SceS000002800
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000002800
GO:0016481 negative regulation of transcription P
RCA
SceS000002800
GO:0016568 chromatin modification P
IDA
SceS000002800
GO:0016573 histone acetylation P
IDA
SceS000002800
ISS
SpoSPCC61.02
GO:0030437 ascospore formation P
TAS
SceS000002800
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IMP
SceS000002800
ISS
SpoSPCC61.02
GO:0045449 regulation of transcription P
ISS
SpoSPCC61.02
GO:0045941 positive regulation of transcription P
RCA
SceS000002800
GO:0051276 chromosome organization P
RCA
SceS000002800

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_5634

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8796 ENSANGP00000017877
Ashbya gossypii (Ago) ago3580 AFR388W
Candida glabrata (Cgl) cgl4722 CAGL0M01540g
Debaryomyces hansenii (Dha) dha5936 DEHA0G05346g
Drosophila melanogaster (Dme) dme12184 CG3169-PA
(FBgn0037981)
Danio rerio (Dre) dre25880 ENSDARP00000020484
(supt3h)		 Q6DHL1
Takifugu rubripes (Fru) fru30357 SINFRUP00000150404
Takifugu rubripes (Fru) fru30358 SINFRUP00000175794
Gallus gallus (Gga) gga16265 ENSGALP00000026908
(SUPT3H)
Homo sapiens (Hsa) hsa27232 ENSP00000306718
(SUPT3H)		 O75486-2
Kluyveromyces lactis (Kla) kla3092 KLLA0E03212g
Mus musculus (Mmu) mmu11749 ENSMUSP00000050783
(MGI:1923723)		 Q8BU36
Neurospora crassa (Ncr) ncr7784 NCU07992.2
Rattus norvegicus (Rno) rno29712 ENSRNOP00000027293
(GI:685697)
Saccharomyces cerevisiae (Sce) sce1457 YDR392W
(S000002800)
Schizosaccharomyces pombe (Spo) spo2154 SPCC61.02 O14311
Yarrowia lipolytica (Yli) yli4747 YALI0E21417g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000123 histone acetyltransferase complex C
ISS
DmeFBgn0037981
GO:0000124 SAGA complex C
IDA
SceS000002800
ISS
SpoSPCC61.02
NAS
DmeFBgn0037981
GO:0000785 chromatin C
NAS
SpoSPCC61.02
GO:0005575 cellular_component C
ND
MmuMGI:1923723
GO:0005634 nucleus C
IDA
SpoSPCC61.02
ISS
DmeFBgn0037981
GO:0005669 transcription factor TFIID complex C
ISS
DmeFBgn0037981
RCA
SceS000002800
GO:0005829 cytosol C
IDA
SpoSPCC61.02
GO:0016591 DNA-directed RNA polymerase II,
holoenzyme		 C
RCA
SceS000002800
GO:0046695 SLIK (SAGA-like) complex C
IDA
SceS000002800
GO:0003674 molecular_function F
ND
MmuMGI:1923723
GO:0003700 transcription factor activity F
ISS
DmeFBgn0037981
GO:0003702 RNA polymerase II transcription factor
activity		 F
RCA
SceS000002800
GO:0003712 transcription cofactor activity F
IDA
SceS000002800
IMP
SceS000002800
ISS
SpoSPCC61.02
GO:0016251 general RNA polymerase II transcription factor
activity		 F
ISS
DmeFBgn0037981
GO:0000747 conjugation with cellular fusion P
TAS
SceS000002800
GO:0001403 invasive growth in response to glucose
limitation		 P
IDA
SceS000002800
GO:0006338 chromatin remodeling P
IC
SpoSPCC61.02
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
ISS
DmeFBgn0037981
GO:0006730 one-carbon metabolic process P
RCA
SceS000002800
GO:0007124 pseudohyphal growth P
IDA
SceS000002800
GO:0008150 biological_process P
ND
MmuMGI:1923723
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000002800
GO:0016481 negative regulation of transcription P
RCA
SceS000002800
GO:0016568 chromatin modification P
IDA
SceS000002800
GO:0016573 histone acetylation P
IDA
SceS000002800
ISS
SpoSPCC61.02
GO:0030437 ascospore formation P
TAS
SceS000002800
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IMP
SceS000002800
ISS
SpoSPCC61.02
GO:0045449 regulation of transcription P
ISS
DmeFBgn0037981
SpoSPCC61.02
GO:0045941 positive regulation of transcription P
RCA
SceS000002800
GO:0051276 chromosome organization P
RCA
SceS000002800

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC61.02
(O14311)		 YDR392W
(S000002800)