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Search term: YDR407C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TRS120
SGD link S000002815
Alternative ID YDR407C
Description One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates vesicle docking and fusion; involved in endoplasmic reticulum (ER) to Golgi membrane traffic
Synonyms YDR407C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1953 ACD-YP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Targeting complex (TRAPP) subunit

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g11040 GI:15238938
Caenorhabditis elegans (Cel) CE03069
(WBGene00007956)		 GI:17550844
Drosophila melanogaster (Dme) 7298694 GI:20129651
Saccharomyces cerevisiae (Sce) YDR407c
(S000002815)		 GI:6320615 Q04183
Schizosaccharomyces pombe (Spo) SPAC6G10.05c GI:19115014 O14251


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g11040
GO:0005816 spindle pole body C
IDA
SpoSPAC6G10.05c
GO:0030008 TRAPP complex C
IDA
SceS000002815
ISS
SpoSPAC6G10.05c
GO:0032153 cell division site C
IDA
SpoSPAC6G10.05c
GO:0003674 molecular_function F
ND
AthAt5g11040
SceS000002815
SpoSPAC6G10.05c
GO:0005083 small GTPase regulator activity F
RCA
SceS000002815
GO:0005085 guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0005088 Ras guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0017112 Rab guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0030695 GTPase regulator activity F
RCA
SceS000002815
GO:0060589 nucleoside-triphosphatase regulator
activity		 F
RCA
SceS000002815
GO:0006886 intracellular protein transport P
IC
SpoSPAC6G10.05c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000002815
ISS
SpoSPAC6G10.05c
GO:0008150 biological_process P
ND
AthAt5g11040
GO:0032313 regulation of Rab GTPase activity P
IMP
SceS000002815

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38816

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC6G10.05c GI:19115014 O14251
Saccharomyces cerevisiae (Sce) TRS120
(S000002815)		 GI:6320615 Q04183
Kluyveromyces lactis (Kla) KLLA0A02255g GI:50302331
Eremothecium gossypii (Ego) AGOS_AAR118C GI:45184942
Magnaporthe grisea (Mgr) MGG_04056 GI:39944090
Neurospora crassa (Ncr) NCU06715.1 GI:32413042


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005816 spindle pole body C
IDA
SpoSPAC6G10.05c
GO:0030008 TRAPP complex C
IDA
SceS000002815
ISS
SpoSPAC6G10.05c
GO:0032153 cell division site C
IDA
SpoSPAC6G10.05c
GO:0003674 molecular_function F
ND
SceS000002815
SpoSPAC6G10.05c
GO:0005083 small GTPase regulator activity F
RCA
SceS000002815
GO:0005085 guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0005088 Ras guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0017112 Rab guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0030695 GTPase regulator activity F
RCA
SceS000002815
GO:0060589 nucleoside-triphosphatase regulator
activity		 F
RCA
SceS000002815
GO:0006886 intracellular protein transport P
IC
SpoSPAC6G10.05c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000002815
ISS
SpoSPAC6G10.05c
GO:0032313 regulation of Rab GTPase activity P
IMP
SceS000002815

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_13221

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago305 AAR118C
Candida glabrata (Cgl) cgl1347 CAGL0F02739g
Cryptococcus neoformans (Cne) cne446 163.m02353
Debaryomyces hansenii (Dha) dha5992 DEHA0G06545g
Kluyveromyces lactis (Kla) kla97 KLLA0A02255g
Neurospora crassa (Ncr) ncr6531 NCU06715.2
Saccharomyces cerevisiae (Sce) sce1473 YDR407C
(S000002815)
Schizosaccharomyces pombe (Spo) spo2296 SPAC6G10.05c O14251
Yarrowia lipolytica (Yli) yli3325 YALI0D15004g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005816 spindle pole body C
IDA
SpoSPAC6G10.05c
GO:0030008 TRAPP complex C
IDA
SceS000002815
ISS
SpoSPAC6G10.05c
GO:0032153 cell division site C
IDA
SpoSPAC6G10.05c
GO:0003674 molecular_function F
ND
SceS000002815
SpoSPAC6G10.05c
GO:0005083 small GTPase regulator activity F
RCA
SceS000002815
GO:0005085 guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0005088 Ras guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0017112 Rab guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0030695 GTPase regulator activity F
RCA
SceS000002815
GO:0060589 nucleoside-triphosphatase regulator
activity		 F
RCA
SceS000002815
GO:0006886 intracellular protein transport P
IC
SpoSPAC6G10.05c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000002815
ISS
SpoSPAC6G10.05c
GO:0032313 regulation of Rab GTPase activity P
IMP
SceS000002815

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC6G10.05c
(O14251)		 YDR407C
(S000002815)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005816 spindle pole body C
IDA
SpoSPAC6G10.05c
GO:0030008 TRAPP complex C
IDA
SceS000002815
ISS
SpoSPAC6G10.05c
GO:0032153 cell division site C
IDA
SpoSPAC6G10.05c
GO:0003674 molecular_function F
ND
SceS000002815
SpoSPAC6G10.05c
GO:0005083 small GTPase regulator activity F
RCA
SceS000002815
GO:0005085 guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0005088 Ras guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0017112 Rab guanyl-nucleotide exchange factor
activity		 F
RCA
SceS000002815
GO:0030695 GTPase regulator activity F
RCA
SceS000002815
GO:0060589 nucleoside-triphosphatase regulator
activity		 F
RCA
SceS000002815
GO:0006886 intracellular protein transport P
IC
SpoSPAC6G10.05c
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000002815
ISS
SpoSPAC6G10.05c
GO:0032313 regulation of Rab GTPase activity P
IMP
SceS000002815

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