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Search term: YDR485C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name VPS72
SGD link S000002893
Alternative ID YDR485C
Description Htz1p-binding component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for vacuolar protein sorting
Synonyms YDR485C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2897 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED DNA-binding protein YL1 and related proteins

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g36740 GI:15228030
Caenorhabditis elegans (Cel) CE25780
(WBGene00007645)		 GI:17505627 Q93230
Drosophila melanogaster (Dme) 7297788
(FBgn0032321)		 GI:20129451
Homo sapiens (Hsa) Hs5174715
(VPS72)		 GI:5174715 Q15906
Saccharomyces cerevisiae (Sce) YDR485c
(S000002893)		 GI:6320693
Schizosaccharomyces pombe (Spo) SPBP35G2.13c GI:19112180 Q9P790


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000812 Swr1 complex C
IDA
SceS000002893
SpoSPBP35G2.13c
GO:0005634 nucleus C
IDA
SceS000002893
GO:0005730 nucleolus C
IDA
SpoSPBP35G2.13c
GO:0005737 cytoplasm C
IDA
SceS000002893
GO:0005819 spindle C
IDA
SpoSPBP35G2.13c
GO:0035267 NuA4 histone acetyltransferase
complex		 C
IPI
DmeFBgn0032321
GO:0043234 protein complex C
IDA
HsaVPS72
GO:0003677 DNA binding F
ISS
AthAt2g36740
GO:0003702 RNA polymerase II transcription factor
activity		 F
TAS
HsaVPS72
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
NAS
SpoSPBP35G2.13c
GO:0004402 histone acetyltransferase activity F
IPI
DmeFBgn0032321
GO:0042393 histone binding F
IPI
SceS000002893
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter		 P
TAS
HsaVPS72
GO:0006338 chromatin remodeling P
IDA
SceS000002893
IGI
SceS000002893
IMP
SceS000002893
IPI
SpoSPBP35G2.13c
GO:0006355 regulation of transcription, DNA-dependent P
ISS
SpoSPBP35G2.13c
GO:0006730 one-carbon metabolic process P
RCA
SceS000002893
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000002893
GO:0010629 negative regulation of gene expression P
IMP
DmeFBgn0032321
GO:0016481 negative regulation of transcription P
RCA
SceS000002893
GO:0016573 histone acetylation P
IDA
DmeFBgn0032321
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
NAS
SpoSPBP35G2.13c
GO:0043486 histone exchange P
IDA
DmeFBgn0032321
IMP
SceS000002893
IPI
SpoSPBP35G2.13c
GO:0051276 chromosome organization P
RCA
SceS000002893

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38850

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) VPS72
(S000002893)		 GI:37362638
Kluyveromyces lactis (Kla) KLLA0C03652g GI:50304807
Eremothecium gossypii (Ego) AGOS_ADR114C GI:45187987


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000812 Swr1 complex C
IDA
SceS000002893
GO:0005634 nucleus C
IDA
SceS000002893
GO:0005737 cytoplasm C
IDA
SceS000002893
GO:0042393 histone binding F
IPI
SceS000002893
GO:0006338 chromatin remodeling P
IDA
SceS000002893
IGI
SceS000002893
IMP
SceS000002893
GO:0006730 one-carbon metabolic process P
RCA
SceS000002893
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000002893
GO:0016481 negative regulation of transcription P
RCA
SceS000002893
GO:0043486 histone exchange P
IMP
SceS000002893
GO:0051276 chromosome organization P
RCA
SceS000002893

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2138

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3672 ENSANGP00000018140
Ashbya gossypii (Ago) ago1855 ADR114C
Arabidopsis thaliana (Ath) ath10747 At2g36740.1
Caenorhabditis elegans (Cel) cel2248 C17E4.6
(CE25780;
WBGene00007645)
Candida glabrata (Cgl) cgl1454 CAGL0F05159g
Dictyostelium discoideum (Ddi) ddi11108 DDB0191982
Debaryomyces hansenii (Dha) dha4970 DEHA0F13211g
Drosophila melanogaster (Dme) dme1934 CG4621-PA
(FBgn0032321)
Danio rerio (Dre) dre7115 ENSDARP00000024332
Danio rerio (Dre) dre7116 ENSDARP00000049394
Takifugu rubripes (Fru) fru18261 SINFRUP00000165045
Gallus gallus (Gga) gga25845 ENSGALP00000001149
(VPS72)
Homo sapiens (Hsa) hsa2000 ENSP00000295315
Homo sapiens (Hsa) hsa1999 ENSP00000346464
(VPS72)		 A6PW55
Kluyveromyces lactis (Kla) kla1358 KLLA0C03652g
Mus musculus (Mmu) mmu17125 ENSMUSP00000009102
(MGI:1202305)		 Q62481
Neurospora crassa (Ncr) ncr6272 NCU06453.2
Oryza sativa (Osa) osa28600 4203.m00212
Oryza sativa (Osa) osa41394 5125.m00172
Plasmodium falciparum (Pfa) pfa1363 PF14_0608
Rattus norvegicus (Rno) rno16588 ENSRNOP00000028625
(RGD:1306121)		 B1WC45
Saccharomyces cerevisiae (Sce) sce1551 YDR485C
(S000002893)
Schizosaccharomyces pombe (Spo) spo3068 SPBP35G2.13c Q9P790
Yarrowia lipolytica (Yli) yli1404 YALI0B15862g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000812 Swr1 complex C
IDA
SceS000002893
SpoSPBP35G2.13c
GO:0005634 nucleus C
IDA
SceS000002893
GO:0005730 nucleolus C
IDA
SpoSPBP35G2.13c
GO:0005737 cytoplasm C
IDA
SceS000002893
GO:0005819 spindle C
IDA
SpoSPBP35G2.13c
GO:0035267 NuA4 histone acetyltransferase
complex		 C
IPI
DmeFBgn0032321
GO:0003677 DNA binding F
ISS
AthAt2g36740
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
NAS
SpoSPBP35G2.13c
GO:0004402 histone acetyltransferase activity F
IPI
DmeFBgn0032321
GO:0042393 histone binding F
IPI
SceS000002893
GO:0006338 chromatin remodeling P
IDA
SceS000002893
IGI
SceS000002893
IMP
SceS000002893
IPI
SpoSPBP35G2.13c
GO:0006355 regulation of transcription, DNA-dependent P
ISS
SpoSPBP35G2.13c
GO:0006730 one-carbon metabolic process P
RCA
SceS000002893
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000002893
GO:0010629 negative regulation of gene expression P
IMP
DmeFBgn0032321
GO:0016481 negative regulation of transcription P
RCA
SceS000002893
GO:0016573 histone acetylation P
IDA
DmeFBgn0032321
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
NAS
SpoSPBP35G2.13c
GO:0043486 histone exchange P
IDA
DmeFBgn0032321
IMP
SceS000002893
IPI
SpoSPBP35G2.13c
GO:0051276 chromosome organization P
RCA
SceS000002893

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBP35G2.13c
(Q9P790)		 YDR485C
(S000002893)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000812 Swr1 complex C
IDA
SceS000002893
SpoSPBP35G2.13c
GO:0005634 nucleus C
IDA
SceS000002893
GO:0005730 nucleolus C
IDA
SpoSPBP35G2.13c
GO:0005737 cytoplasm C
IDA
SceS000002893
GO:0005819 spindle C
IDA
SpoSPBP35G2.13c
GO:0003704 specific RNA polymerase II transcription factor
activity		 F
NAS
SpoSPBP35G2.13c
GO:0042393 histone binding F
IPI
SceS000002893
GO:0006338 chromatin remodeling P
IDA
SceS000002893
IGI
SceS000002893
IMP
SceS000002893
IPI
SpoSPBP35G2.13c
GO:0006355 regulation of transcription, DNA-dependent P
ISS
SpoSPBP35G2.13c
GO:0006730 one-carbon metabolic process P
RCA
SceS000002893
GO:0009890 negative regulation of biosynthetic
process		 P
RCA
SceS000002893
GO:0016481 negative regulation of transcription P
RCA
SceS000002893
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
NAS
SpoSPBP35G2.13c
GO:0043486 histone exchange P
IMP
SceS000002893
IPI
SpoSPBP35G2.13c
GO:0051276 chromosome organization P
RCA
SceS000002893

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GO info in one table:

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