YOGY Home YOGY Help

Search term: YDR495C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name VPS3
SGD link S000002903
Alternative ID YDR495C
Description Component of CORVET tethering complex; cytoplasmic protein required for the sorting and processing of soluble vacuolar proteins, acidification of the vacuolar lumen, and assembly of the vacuolar H+-ATPase
Synonyms YDR495C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38854

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) VPS3
(S000002903)		 GI:6320703 P23643
Kluyveromyces lactis (Kla) KLLA0C12353g GI:50305577
Eremothecium gossypii (Ego) AGOS_AFR341C GI:45198859


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
TAS
SceS000002903
GO:0033263 CORVET complex C
IDA
SceS000002903
GO:0003674 molecular_function F
ND
SceS000002903
GO:0000011 vacuole inheritance P
IMP
SceS000002903
GO:0006623 protein targeting to vacuole P
IMP
SceS000002903
GO:0007035 vacuolar acidification P
IMP
SceS000002903

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17609

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3533 AFR341C
Candida glabrata (Cgl) cgl1825 CAGL0G04697g
Debaryomyces hansenii (Dha) dha637 DEHA0A14234g
Kluyveromyces lactis (Kla) kla1748 KLLA0C12353g
Saccharomyces cerevisiae (Sce) sce1561 YDR495C
(S000002903)
Schizosaccharomyces pombe (Spo) spo1077 SPCC364.05 O59796
Yarrowia lipolytica (Yli) yli6055 YALI0F17006g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC364.05
GO:0005737 cytoplasm C
ISS
SpoSPCC364.05
TAS
SceS000002903
GO:0005829 cytosol C
IDA
SpoSPCC364.05
GO:0033263 CORVET complex C
IDA
SceS000002903
GO:0003674 molecular_function F
ND
SceS000002903
GO:0005083 small GTPase regulator activity F
ISS
SpoSPCC364.05
GO:0000011 vacuole inheritance P
IMP
SceS000002903
GO:0006623 protein targeting to vacuole P
IMP
SceS000002903
ISS
SpoSPCC364.05
GO:0006886 intracellular protein transport P
IC
SpoSPCC364.05
GO:0007035 vacuolar acidification P
IMP
SceS000002903

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC364.05
(O59796)		 YDR495C
(S000002903)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC364.05
GO:0005737 cytoplasm C
ISS
SpoSPCC364.05
TAS
SceS000002903
GO:0005829 cytosol C
IDA
SpoSPCC364.05
GO:0033263 CORVET complex C
IDA
SceS000002903
GO:0003674 molecular_function F
ND
SceS000002903
GO:0005083 small GTPase regulator activity F
ISS
SpoSPCC364.05
GO:0000011 vacuole inheritance P
IMP
SceS000002903
GO:0006623 protein targeting to vacuole P
IMP
SceS000002903
ISS
SpoSPCC364.05
GO:0006886 intracellular protein transport P
IC
SpoSPCC364.05
GO:0007035 vacuolar acidification P
IMP
SceS000002903

Back to the top
YOGY Home YOGY Help

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk