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Search term: YDR499W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name LCD1
SGD link S000002907
Alternative ID YDR499W
Description Essential protein required for the DNA integrity checkpoint pathways; interacts physically with Mec1p; putative homolog of S. pombe Rad26 and human ATRIP
Synonyms YDR499W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
48662

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) LCD1
(S000002907)		 GI:6320707
Kluyveromyces lactis (Kla) KLLA0C01892g GI:50304649
Eremothecium gossypii (Ego) AGOS_AFR687W GI:45199206


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000228 nuclear chromosome C
IDA
SceS000002907
GO:0003684 damaged DNA binding F
IDA
SceS000002907
GO:0005515 protein binding F
IDA
SceS000002907
GO:0000077 DNA damage checkpoint P
IMP
SceS000002907
IPI
SceS000002907
GO:0007004 telomere maintenance via telomerase P
IMP
SceS000002907
GO:0045184 establishment of protein localization P
IDA
SceS000002907
IMP
SceS000002907

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_24634

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3880 AFR687W
Candida glabrata (Cgl) cgl3359 CAGL0J08393g
Debaryomyces hansenii (Dha) dha3886 DEHA0E14575g
Kluyveromyces lactis (Kla) kla1279 KLLA0C01892g
Saccharomyces cerevisiae (Sce) sce1565 YDR499W
(S000002907)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000228 nuclear chromosome C
IDA
SceS000002907
GO:0003684 damaged DNA binding F
IDA
SceS000002907
GO:0005515 protein binding F
IDA
SceS000002907
GO:0000077 DNA damage checkpoint P
IMP
SceS000002907
IPI
SceS000002907
GO:0007004 telomere maintenance via telomerase P
IMP
SceS000002907
GO:0045184 establishment of protein localization P
IDA
SceS000002907
IMP
SceS000002907

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC9E9.08
(P36632)		 YDR499W
(S000002907)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000228 nuclear chromosome C
IDA
SceS000002907
GO:0005634 nucleus C
IDA
SpoSPAC9E9.08
GO:0003674 molecular_function F
ND
SpoSPAC9E9.08
GO:0003684 damaged DNA binding F
IDA
SceS000002907
GO:0005515 protein binding F
IDA
SceS000002907
GO:0000076 DNA replication checkpoint P
TAS
SpoSPAC9E9.08
GO:0000077 DNA damage checkpoint P
IMP
SceS000002907
IPI
SceS000002907
GO:0007004 telomere maintenance via telomerase P
IMP
SceS000002907
GO:0007095 mitotic cell cycle G2/M transition DNA damage
checkpoint		 P
TAS
SpoSPAC9E9.08
GO:0031573 intra-S DNA damage checkpoint P
IMP
SpoSPAC9E9.08
GO:0045184 establishment of protein localization P
IDA
SceS000002907
IMP
SceS000002907

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