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Search term: YDR527W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RBA50
SGD link S000002935
Alternative ID YDR527W
Description Protein involved in transcription; interacts with RNA polymerase II subunits Rpb2p, Rpb3, and Rpb11p; has similarity to human RPAP1
Synonyms YDR527W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1894 --D-YP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Drosophila melanogaster (Dme) 7294584 GI:7294584
Saccharomyces cerevisiae (Sce) YDR527w
(S000002935)		 GI:6320735 Q04418
Schizosaccharomyces pombe (Spo) SPBC947.13 GI:19112055 O43088


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC947.13
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
ISS
SpoSPBC947.13
GO:0005737 cytoplasm C
IDA
SceS000002935
GO:0005829 cytosol C
IDA
SpoSPBC947.13
GO:0003674 molecular_function F
ND
SceS000002935
GO:0003899 DNA-directed RNA polymerase activity F
ISS
SpoSPBC947.13
GO:0006366 transcription from RNA polymerase II
promoter		 P
IMP
SceS000002935
ISS
SpoSPBC947.13

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
31583

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) rba50
(SPBC947.13)		 GI:19112055 O43088
Saccharomyces cerevisiae (Sce) RBA50
(S000002935)		 GI:6320735 Q04418
Kluyveromyces lactis (Kla) KLLA0C00913g GI:50304559
Eremothecium gossypii (Ego) AGOS_AFR727W GI:45199246
Magnaporthe grisea (Mgr) MGG_03321 GI:39942482
Neurospora crassa (Ncr) NCU06859.1 GI:32413330


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC947.13
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
ISS
SpoSPBC947.13
GO:0005737 cytoplasm C
IDA
SceS000002935
GO:0005829 cytosol C
IDA
SpoSPBC947.13
GO:0003674 molecular_function F
ND
SceS000002935
GO:0003899 DNA-directed RNA polymerase activity F
ISS
SpoSPBC947.13
GO:0006366 transcription from RNA polymerase II
promoter		 P
IMP
SceS000002935
ISS
SpoSPBC947.13

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_4186

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3661 ENSANGP00000011634
Ashbya gossypii (Ago) ago3920 AFR727W
Arabidopsis thaliana (Ath) ath22037 At4g38440.1
Candida glabrata (Cgl) cgl2135 CAGL0H01595g
Cryptococcus neoformans (Cne) cne1150 180.m00078
Dictyostelium discoideum (Ddi) ddi6711 DDB0206444
Debaryomyces hansenii (Dha) dha3950 DEHA0E15961g
Drosophila melanogaster (Dme) dme9233 CG32104-PB
(FBgn0052104)
Danio rerio (Dre) dre27893 ENSDARP00000003473
Danio rerio (Dre) dre27894 ENSDARP00000048158
Takifugu rubripes (Fru) fru23016 SINFRUP00000170950
Gallus gallus (Gga) gga24485 ENSGALP00000000230
(RPAP1)
Gallus gallus (Gga) gga19223 ENSGALP00000014034
(RPAP1)
Homo sapiens (Hsa) hsa10481 ENSP00000306123
(RPAP1)		 Q9BWH6-1
Homo sapiens (Hsa) hsa10482 ENSP00000349998
Kluyveromyces lactis (Kla) kla1234 KLLA0C00913g
Mus musculus (Mmu) mmu15299 ENSMUSP00000037275
(MGI:1916175)		 Q80TE0-1
Neurospora crassa (Ncr) ncr6673 NCU06859.2
Oryza sativa (Osa) osa22812 3760.m00233
Rattus norvegicus (Rno) rno19495 ENSRNOP00000007299
(RGD:1590891)		 Q3T1I9
Saccharomyces cerevisiae (Sce) sce1598 YDR527W
(S000002935)
Schizosaccharomyces pombe (Spo) spo4032 SPBC947.13 O43088
Yarrowia lipolytica (Yli) yli4963 YALI0E26807g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC947.13
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
ISS
SpoSPBC947.13
GO:0005737 cytoplasm C
IDA
SceS000002935
GO:0005829 cytosol C
IDA
SpoSPBC947.13
GO:0030880 RNA polymerase complex C
ISO
MmuMGI:1916175
GO:0003674 molecular_function F
ND
SceS000002935
GO:0003899 DNA-directed RNA polymerase activity F
ISS
SpoSPBC947.13
GO:0006366 transcription from RNA polymerase II
promoter		 P
IMP
SceS000002935
ISS
SpoSPBC947.13
GO:0008150 biological_process P
ND
MmuMGI:1916175

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC947.13
(O43088)		 YDR527W
(S000002935)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPBC947.13
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
ISS
SpoSPBC947.13
GO:0005737 cytoplasm C
IDA
SceS000002935
GO:0005829 cytosol C
IDA
SpoSPBC947.13
GO:0003674 molecular_function F
ND
SceS000002935
GO:0003899 DNA-directed RNA polymerase activity F
ISS
SpoSPBC947.13
GO:0006366 transcription from RNA polymerase II
promoter		 P
IMP
SceS000002935
ISS
SpoSPBC947.13

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