YOGY Home YOGY Help

Search term: YEL024W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RIP1
SGD link S000000750
Alternative ID YEL024W
Description Ubiquinol-cytochrome-c reductase, a Rieske iron-sulfur protein of the mitochondrial cytochrome bc1 complex; transfers electrons from ubiquinol to cytochrome c1 during respiration
Synonyms YEL024W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1671 ACDHYP-

KOGs classification KOGs description
METABOLISM Ubiquinol cytochrome c reductase, subunit RIP1

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g03280 GI:15236275
Arabidopsis thaliana (Ath) At5g13430 GI:15240626
Arabidopsis thaliana (Ath) At5g13440 GI:15240627
Caenorhabditis elegans (Cel) CE17071
(WBGene00002162)		 GI:17540418 O44512
Drosophila melanogaster (Dme) 7296057 GI:17864350 Q9VQ28
Drosophila melanogaster (Dme) 7296058 GI:7296058
Homo sapiens (Hsa) Hs13655145 GI:13655145
Homo sapiens (Hsa) Hs20540928 GI:20540928
Homo sapiens (Hsa) Hs20556670 GI:20556670
Homo sapiens (Hsa) Hs5174743 GI:5174743
Saccharomyces cerevisiae (Sce) YEL024w
(S000000750)		 GI:6320811 P08067
Schizosaccharomyces pombe (Spo) SPBC16H5.06 GI:19112733 Q09154


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt5g13430
At5g13440
SceS000000750
SpoSPBC16H5.06
IPI
SceS000000750
GO:0005743 mitochondrial inner membrane C
IGI
SpoSPBC16H5.06
GO:0005750 mitochondrial respiratory chain complex
III		 C
IDA
AthAt5g13440
At5g13430
SceS000000750
IGI
SpoSPBC16H5.06
GO:0005886 plasma membrane C
IDA
AthAt4g03280
GO:0009507 chloroplast C
IDA
AthAt4g03280
GO:0009512 cytochrome b6f complex C
TAS
AthAt4g03280
GO:0009535 chloroplast thylakoid membrane C
IDA
AthAt4g03280
TAS
AthAt4g03280
GO:0009579 thylakoid C
IDA
AthAt4g03280
GO:0009941 chloroplast envelope C
IDA
AthAt4g03280
GO:0016020 membrane C
IDA
AthAt5g13430
At4g03280
GO:0008121 ubiquinol-cytochrome-c reductase
activity		 F
IDA
SceS000000750
IGI
SpoSPBC16H5.06
GO:0046028 electron transporter, transferring electrons from
cytochrome b6/f complex of photosystem II
activity		 F
TAS
AthAt4g03280
GO:0046872 metal ion binding F
IDA
AthAt5g13430
At5g13440
GO:0000003 reproduction P
IMP
CelWBGene00002162
GO:0006122 mitochondrial electron transport, ubiquinol to
cytochrome c		 P
IDA
SceS000000750
IGI
SpoSPBC16H5.06
IMP
CelWBGene00002162
GO:0006793 phosphorus metabolic process P
RCA
SceS000000750
GO:0006811 ion transport P
RCA
SceS000000750
GO:0008219 cell death P
RCA
SceS000000750
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00002162
GO:0009060 aerobic respiration P
IMP
SceS000000750
GO:0009117 nucleotide metabolic process P
RCA
SceS000000750
GO:0009775 photosynthetic electron transport in cytochrome
b6/f		 P
TAS
AthAt4g03280
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00002162
GO:0010196 nonphotochemical quenching P
IMP
AthAt4g03280
GO:0015992 proton transport P
IGI
SpoSPBC16H5.06
GO:0034220 ion transmembrane transport P
IGI
SpoSPBC16H5.06
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00002162
GO:0042742 defense response to bacterium P
IEP
AthAt4g03280
GO:0055114 oxidation reduction P
RCA
SceS000000750
TAS
AthAt5g13430
At5g13440

Back to the top

HomoloGene results:

HomoloGene cluster Phylogenetic pattern
4378

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) UQCRFS1 GI:163644321
Pan troglodytes (Ptr) LOC741344 GI:114676451
Canis familiaris (Cfa) LOC476503 GI:57036706
Mus musculus (Mmu) Uqcrfs1
(MGI:1913944)		 GI:13385168 Q9CR68
Rattus norvegicus (Rno) Uqcrfs1
(RGD:628838)		 GI:57114330
Gallus gallus (Gga) UQCRFSL1 GI:57524866
Drosophila melanogaster (Dme) RFeSP
(FBgn0021906)		 GI:24580896
Anopheles gambiae (Aga) AgaP_AGAP008955 GI:158299624
Caenorhabditis elegans (Cel) isp-1
(CE17071;
WBGene00002162)		 GI:17540418 O44512
Schizosaccharomyces pombe (Spo) rip1
(SPBC16H5.06)		 GI:19112733 Q09154
Saccharomyces cerevisiae (Sce) RIP1
(S000000750)		 GI:6320811 P08067
Kluyveromyces lactis (Kla) KLLA0E22682g GI:50309919
Eremothecium gossypii (Ego) AGOS_AEL067W GI:45190540
Magnaporthe grisea (Mgr) MGG_05093 GI:39940294
Neurospora crassa (Ncr) NCU06606.1 GI:32411961
Arabidopsis thaliana (Ath) AT5G13440 GI:15240627
Arabidopsis thaliana (Ath) AT5G13430 GI:18417067
Oryza sativa (Osa) Os02g0520800 GI:115446391
Oryza sativa (Osa) Os04g0398500 GI:115458144
Plasmodium falciparum (Pfa) PF14_0373 GI:124809329


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt5g13430
At5g13440
MmuMGI:1913944
SceS000000750
SpoSPBC16H5.06
IPI
SceS000000750
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:1913944
IGI
SpoSPBC16H5.06
GO:0005750 mitochondrial respiratory chain complex
III		 C
IDA
AthAt5g13440
At5g13430
SceS000000750
IGI
SpoSPBC16H5.06
ISO
MmuMGI:1913944
ISS
DmeFBgn0021906
PfaPF14_0373
NAS
HsaUQCRFS1
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0021906
GO:0016020 membrane C
IDA
AthAt5g13430
GO:0031966 mitochondrial membrane C
ISO
MmuMGI:1913944
GO:0008121 ubiquinol-cytochrome-c reductase
activity		 F
IDA
SceS000000750
IGI
SpoSPBC16H5.06
ISS
DmeFBgn0021906
NAS
HsaUQCRFS1
GO:0032403 protein complex binding F
ISO
MmuMGI:1913944
GO:0046872 metal ion binding F
IDA
AthAt5g13430
At5g13440
GO:0000003 reproduction P
IMP
CelWBGene00002162
GO:0006122 mitochondrial electron transport, ubiquinol to
cytochrome c		 P
IDA
SceS000000750
IGI
SpoSPBC16H5.06
IMP
CelWBGene00002162
ISS
DmeFBgn0021906
GO:0006793 phosphorus metabolic process P
RCA
SceS000000750
GO:0006811 ion transport P
RCA
SceS000000750
GO:0007040 lysosome organization P
IMP
DmeFBgn0021906
GO:0008219 cell death P
RCA
SceS000000750
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00002162
GO:0009060 aerobic respiration P
IMP
SceS000000750
GO:0009117 nucleotide metabolic process P
RCA
SceS000000750
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00002162
GO:0015992 proton transport P
IGI
SpoSPBC16H5.06
GO:0034220 ion transmembrane transport P
IGI
SpoSPBC16H5.06
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00002162
GO:0055114 oxidation reduction P
NAS
HsaUQCRFS1
RCA
SceS000000750
TAS
AthAt5g13430
At5g13440

Back to the top

OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1768

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga11041 ENSANGP00000019464
Ashbya gossypii (Ago) ago2439 AEL067W
Arabidopsis thaliana (Ath) ath23533 At5g13430.1
Arabidopsis thaliana (Ath) ath23534 At5g13440.1
Caenorhabditis elegans (Cel) cel8936 F42G8.12
(CE17071;
WBGene00002162)
Candida glabrata (Cgl) cgl2658 CAGL0I03190g
Cryptococcus neoformans (Cne) cne3069 167.m03373
Dictyostelium discoideum (Ddi) ddi7716 DDB0186273
Debaryomyces hansenii (Dha) dha4952 DEHA0F12771g
Drosophila melanogaster (Dme) dme261 CG7361-PA
(FBgn0021906)
Drosophila melanogaster (Dme) dme262 CG7361-PB
(FBgn0021906)
Danio rerio (Dre) dre21846 ENSDARP00000011707
(uqcrfs1)		 Q6PC48
Takifugu rubripes (Fru) fru8660 SINFRUP00000155376
Gallus gallus (Gga) gga4625 ENSGALP00000007075
(UQCRFSL1)		 Q5ZLR5
Homo sapiens (Hsa) hsa21708 ENSP00000303001
Homo sapiens (Hsa) hsa16094 ENSP00000306397
(UQCRFS1)		 P47985
Kluyveromyces lactis (Kla) kla3972 KLLA0E22682g
Mus musculus (Mmu) mmu6774 ENSMUSP00000045284
(MGI:1913944)		 Q9CR68
Neurospora crassa (Ncr) ncr6424 NCU06606.2
Oryza sativa (Osa) osa4909 2341.m00134
Oryza sativa (Osa) osa54683 6083.m00029
Oryza sativa (Osa) osa57961 6248.m00016
Oryza sativa (Osa) osa82302 8182.m00129
Plasmodium falciparum (Pfa) pfa1824 PF14_0373
Rattus norvegicus (Rno) rno13264 ENSRNOP00000024609
(RGD:628838)		 P20788
Saccharomyces cerevisiae (Sce) sce1647 YEL024W
(S000000750)
Schizosaccharomyces pombe (Spo) spo1058 SPBC16H5.06 Q09154
Yarrowia lipolytica (Yli) yli110 YALI0A02915g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt5g13430
At5g13440
MmuMGI:1913944
SceS000000750
SpoSPBC16H5.06
IPI
SceS000000750
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:1913944
IGI
SpoSPBC16H5.06
GO:0005750 mitochondrial respiratory chain complex
III		 C
IDA
AthAt5g13440
At5g13430
SceS000000750
IGI
SpoSPBC16H5.06
ISO
MmuMGI:1913944
ISS
DmeFBgn0021906
PfaPF14_0373
GO:0005875 microtubule associated complex C
IDA
DmeFBgn0021906
GO:0016020 membrane C
IDA
AthAt5g13430
GO:0031966 mitochondrial membrane C
ISO
MmuMGI:1913944
GO:0008121 ubiquinol-cytochrome-c reductase
activity		 F
IDA
SceS000000750
IGI
SpoSPBC16H5.06
ISS
DmeFBgn0021906
GO:0032403 protein complex binding F
ISO
MmuMGI:1913944
GO:0046872 metal ion binding F
IDA
AthAt5g13430
At5g13440
GO:0000003 reproduction P
IMP
CelWBGene00002162
GO:0006122 mitochondrial electron transport, ubiquinol to
cytochrome c		 P
IDA
SceS000000750
IGI
SpoSPBC16H5.06
IMP
CelWBGene00002162
ISS
DmeFBgn0021906
GO:0006793 phosphorus metabolic process P
RCA
SceS000000750
GO:0006811 ion transport P
RCA
SceS000000750
GO:0007040 lysosome organization P
IMP
DmeFBgn0021906
GO:0008219 cell death P
RCA
SceS000000750
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00002162
GO:0009060 aerobic respiration P
IMP
SceS000000750
GO:0009117 nucleotide metabolic process P
RCA
SceS000000750
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00002162
GO:0015992 proton transport P
IGI
SpoSPBC16H5.06
GO:0034220 ion transmembrane transport P
IGI
SpoSPBC16H5.06
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00002162
GO:0055114 oxidation reduction P
RCA
SceS000000750
TAS
AthAt5g13430
At5g13440

Back to the top

Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC16H5.06
(Q09154)		 YEL024W
(S000000750)