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Search term: YEL054C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL12A
SGD link S000000780
Alternative ID YEL054C
Description Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Bp; rpl12a rpl12b double mutant exhibits slow growth and slow translation; has similarity to E. coli L11 and rat L12 ribosomal proteins
Synonyms YEL054C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0886 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 40S ribosomal protein S2

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g37190 GI:15228098
Arabidopsis thaliana (Ath) At3g53430 GI:15231814
Arabidopsis thaliana (Ath) At5g60670 GI:15239409
Caenorhabditis elegans (Cel) CE17986
(WBGene00004424)
GI:17541134 P61866
Caenorhabditis elegans (Cel) CE28042 GI:17541136
Drosophila melanogaster (Dme) 7291730
(RpL12)
GI:17864452 Q9W1B9
Homo sapiens (Hsa) Hs14749869 GI:14749869
Homo sapiens (Hsa) Hs17438567 GI:17438567
Homo sapiens (Hsa) Hs18551842 GI:18551842
Homo sapiens (Hsa) Hs18574558 GI:18574558
Homo sapiens (Hsa) Hs18599384 GI:18599384
Homo sapiens (Hsa) Hs20483194 GI:20483194
Homo sapiens (Hsa) Hs20484271 GI:20484271
Homo sapiens (Hsa) Hs20535146 GI:20535146
Homo sapiens (Hsa) Hs20539754 GI:20539754
Homo sapiens (Hsa) Hs20554345 GI:20554345
Homo sapiens (Hsa) Hs20554487 GI:20554487
Homo sapiens (Hsa) Hs20556494 GI:20556494
Homo sapiens (Hsa) Hs20557305 GI:20557305
Homo sapiens (Hsa) Hs22050693 GI:22050693
Homo sapiens (Hsa) Hs22057123 GI:22057123
Homo sapiens (Hsa) Hs22066150 GI:22066150
Homo sapiens (Hsa) Hs22066243 GI:22066243
Homo sapiens (Hsa) Hs4506597
(RPL12)
GI:4506597 P30050
Saccharomyces cerevisiae (Sce) YDR418w
(S000002826)
GI:6320625 P17079
Saccharomyces cerevisiae (Sce) YEL054c
(S000000780)
GI:6320781 P17079
Schizosaccharomyces pombe (Spo) SPCC16C4.13c GI:19075397 O75000
Schizosaccharomyces pombe (Spo) SPCC31H12.04c GI:19075397 O75000
Encephalitozoon cuniculi (Ecu) ECU08g2010 GI:19173524 Q8SR84
Arabidopsis thaliana (Ath) At2g37190 GI:15228098
Arabidopsis thaliana (Ath) At3g53430 GI:15231814
Arabidopsis thaliana (Ath) At5g60670 GI:15239409
Caenorhabditis elegans (Cel) CE17986
(WBGene00004424)
GI:17541134 P61866
Caenorhabditis elegans (Cel) CE28042 GI:17541136
Drosophila melanogaster (Dme) 7291730
(RpL12)
GI:17864452 Q9W1B9
Homo sapiens (Hsa) Hs14749869 GI:14749869
Homo sapiens (Hsa) Hs17438567 GI:17438567
Homo sapiens (Hsa) Hs18551842 GI:18551842
Homo sapiens (Hsa) Hs18574558 GI:18574558
Homo sapiens (Hsa) Hs18599384 GI:18599384
Homo sapiens (Hsa) Hs20483194 GI:20483194
Homo sapiens (Hsa) Hs20484271 GI:20484271
Homo sapiens (Hsa) Hs20535146 GI:20535146
Homo sapiens (Hsa) Hs20539754 GI:20539754
Homo sapiens (Hsa) Hs20554345 GI:20554345
Homo sapiens (Hsa) Hs20554487 GI:20554487
Homo sapiens (Hsa) Hs20556494 GI:20556494
Homo sapiens (Hsa) Hs20557305 GI:20557305
Homo sapiens (Hsa) Hs22050693 GI:22050693
Homo sapiens (Hsa) Hs22057123 GI:22057123
Homo sapiens (Hsa) Hs22066150 GI:22066150
Homo sapiens (Hsa) Hs22066243 GI:22066243
Homo sapiens (Hsa) Hs4506597
(RPL12)
GI:4506597 P30050
Saccharomyces cerevisiae (Sce) YDR418w
(S000002826)
GI:6320625 P17079
Saccharomyces cerevisiae (Sce) YEL054c
(S000000780)
GI:6320781 P17079
Schizosaccharomyces pombe (Spo) SPCC16C4.13c GI:19075397 O75000
Schizosaccharomyces pombe (Spo) SPCC31H12.04c GI:19075397 O75000
Encephalitozoon cuniculi (Ecu) ECU08g2010 GI:19173524 Q8SR84


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt2g37190
GO:0005730 nucleolus C
IDA
AthAt2g37190
SpoSPCC16C4.13c
GO:0005773 vacuole C
IDA
AthAt2g37190
GO:0005811 lipid particle C
IDA
DmeRpL12
GO:0005829 cytosol C
IDA
SpoSPCC16C4.13c
SPCC31H12.04c
GO:0005840 ribosome C
ISS
AthAt2g37190
At3g53430
At5g60670
GO:0009507 chloroplast C
IDA
AthAt2g37190
GO:0016020 membrane C
IDA
AthAt3g53430
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g53430
At2g37190
At5g60670
ISS
AthAt3g53430
At5g60670
At2g37190
DmeRpL12
SpoSPCC31H12.04c
SPCC16C4.13c
TAS
SceS000000780
S000002826
GO:0022626 cytosolic ribosome C
IDA
AthAt2g37190
GO:0003674 molecular_function F
ND
SpoSPCC16C4.13c
GO:0003735 structural constituent of ribosome F
ISS
AthAt2g37190
At3g53430
At5g60670
DmeRpL12
TAS
SceS000000780
S000002826
GO:0008270 zinc ion binding F
IDA
AthAt2g37190
GO:0000003 reproduction P
IMP
CelWBGene00004424
GO:0000022 mitotic spindle elongation P
IMP
DmeRpL12
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000000780
S000002826
ISS
SpoSPCC16C4.13c
SPCC31H12.04c
GO:0002119 nematode larval development P
IMP
CelWBGene00004424
GO:0006412 translation P
ISS
DmeRpL12
SpoSPCC16C4.13c
SPCC31H12.04c
TAS
SceS000002826
S000000780
GO:0006415 translational termination P
RCA
SceS000002826
GO:0006417 regulation of translation P
RCA
SceS000002826
S000000780
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00004424
GO:0009409 response to cold P
IEP
AthAt2g37190
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004424
GO:0032940 secretion by cell P
IMP
CelWBGene00004424
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004424
GO:0042254 ribosome biogenesis P
ISS
AthAt3g53430
At5g60670
At2g37190

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
112233

Species Gene ID NCBI link UniProt link
Pan troglodytes (Ptr) LOC746985 GI:114606936
Mus musculus (Mmu) Gm4957 GI:82878973
Rattus norvegicus (Rno) Rpl12 GI:62653926
Schizosaccharomyces pombe (Spo) rpl12-2
(SPCC31H12.04c)
GI:19075397 O75000
Schizosaccharomyces pombe (Spo) rpl12-1 GI:19075423
Saccharomyces cerevisiae (Sce) RPL12B
(S000002826)
GI:6320625 P17079
Saccharomyces cerevisiae (Sce) RPL12A
(S000000780)
GI:6320781 P17079
Kluyveromyces lactis (Kla) KLLA0A01903g GI:50302299
Eremothecium gossypii (Ego) AGOS_AAR134W GI:45184958
Magnaporthe grisea (Mgr) MGG_06895 GI:145605732
Neurospora crassa (Ncr) NCU01317.1 GI:32412660
Arabidopsis thaliana (Ath) AT5G60670 GI:15239409
Arabidopsis thaliana (Ath) AT2G37190 GI:15228098
Arabidopsis thaliana (Ath) AT3G53430 GI:15231814
Oryza sativa (Osa) Os02g0699600 GI:115448105
Oryza sativa (Osa) Os04g0598200 GI:115460282
Plasmodium falciparum (Pfa) PFE0850c GI:124506259


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt2g37190
GO:0005730 nucleolus C
IDA
AthAt2g37190
GO:0005773 vacuole C
IDA
AthAt2g37190
GO:0005829 cytosol C
IDA
SpoSPCC31H12.04c
GO:0005840 ribosome C
ISS
AthAt2g37190
At3g53430
At5g60670
GO:0009507 chloroplast C
IDA
AthAt2g37190
GO:0016020 membrane C
IDA
AthAt3g53430
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g53430
At2g37190
At5g60670
ISS
AthAt3g53430
At5g60670
At2g37190
SpoSPCC31H12.04c
TAS
SceS000000780
S000002826
GO:0022626 cytosolic ribosome C
IDA
AthAt2g37190
GO:0003735 structural constituent of ribosome F
ISS
AthAt2g37190
At3g53430
At5g60670
TAS
SceS000000780
S000002826
GO:0008270 zinc ion binding F
IDA
AthAt2g37190
GO:0000027 ribosomal large subunit assembly P
IMP
SceS000000780
S000002826
ISS
SpoSPCC31H12.04c
GO:0006412 translation P
ISS
SpoSPCC31H12.04c
TAS
SceS000002826
S000000780
GO:0006415 translational termination P
RCA
SceS000002826
GO:0006417 regulation of translation P
RCA
SceS000002826
S000000780
GO:0009409 response to cold P
IEP
AthAt2g37190
GO:0042254 ribosome biogenesis P
ISS
AthAt3g53430
At5g60670
At2g37190

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_858

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga12365 ENSANGP00000019214
Ashbya gossypii (Ago) ago321 AAR134W
Arabidopsis thaliana (Ath) ath10801 At2g37190.1
Arabidopsis thaliana (Ath) ath16691 At3g53430.1
Arabidopsis thaliana (Ath) ath28153 At5g60670.1
Caenorhabditis elegans (Cel) cel11520 JC8.3a
(CE17986;
WBGene00004424)
Candida glabrata (Cgl) cgl1356 CAGL0F02937g
Cryptococcus neoformans (Cne) cne5729 179.m00598
Dictyostelium discoideum (Ddi) ddi13273 DDB0229950
Debaryomyces hansenii (Dha) dha3151 DEHA0D19041g
Drosophila melanogaster (Dme) dme6936 CG3195-PA
Drosophila melanogaster (Dme) dme6937 CG3195-PB
Drosophila melanogaster (Dme) dme6935 CG3195-PC
Danio rerio (Dre) dre19451 ENSDARP00000009096
(rpl12)
Q5BKW5
Encephalitozoon cuniculi (Ecu) ecu355 19173524
Takifugu rubripes (Fru) fru21861 SINFRUP00000142732
Gallus gallus (Gga) gga8183 ENSGALP00000014298
(RPL12)
Homo sapiens (Hsa) hsa31933 ENSP00000352744
Homo sapiens (Hsa) hsa31931 ENSP00000354739
(RPL12)
P30050-1
Homo sapiens (Hsa) hsa31932 ENSP00000355071
Kluyveromyces lactis (Kla) kla81 KLLA0A01903g
Mus musculus (Mmu) mmu14467 ENSMUSP00000048975
(MGI:98002)
Q6DI58
Mus musculus (Mmu) mmu4412 ENSMUSP00000071449
Mus musculus (Mmu) mmu1977 ENSMUSP00000074283
Mus musculus (Mmu) mmu17557 ENSMUSP00000080542
Neurospora crassa (Ncr) ncr1276 NCU01317.2
Oryza sativa (Osa) osa25582 3850.m00160
Oryza sativa (Osa) osa45112 5372.m00171
Plasmodium falciparum (Pfa) pfa3619 PFE0850c
Rattus norvegicus (Rno) rno18437 ENSRNOP00000021725
Rattus norvegicus (Rno) rno18436 ENSRNOP00000040848
(RGD:1590883)
Q4QQV3
Rattus norvegicus (Rno) rno30768 ENSRNOP00000041462
(RGD:1565106)
P23358
Rattus norvegicus (Rno) rno28965 ENSRNOP00000042027
Rattus norvegicus (Rno) rno21309 ENSRNOP00000051432
Saccharomyces cerevisiae (Sce) sce1484 YDR418W
(S000002826)
Saccharomyces cerevisiae (Sce) sce1682 YEL054C
(S000000780)
Schizosaccharomyces pombe (Spo) spo1379 SPCC16C4.13c O75000
Schizosaccharomyces pombe (Spo) spo4859 SPCC31H12.04c O75000
Yarrowia lipolytica (Yli) yli3291 YALI0D13882g