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Search term: YER006W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NUG1
SGD link S000000808
Alternative ID YER006W
Description GTPase that associates with nuclear 60S pre-ribosomes, required for export of 60S ribosomal subunits from the nucleus
Synonyms YER006W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2484 ACDHYPE

KOGs classification KOGs description
POORLY CHARACTERIZED GTPase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g07050 GI:15231373
Arabidopsis thaliana (Ath) At4g02790 GI:15235505
Caenorhabditis elegans (Cel) CE02270
(WBGene00003821)
GI:17534827 Q21086
Drosophila melanogaster (Dme) 7300220 GI:7300220
Homo sapiens (Hsa) Hs7657048 GI:7657048
Homo sapiens (Hsa) Hs9506611
(GNL3L)
GI:9506611 Q9NVN8
Homo sapiens (Hsa) Hs13376500 GI:13376500
Saccharomyces cerevisiae (Sce) YER006w
(S000000808)
GI:6320842 P40010
Schizosaccharomyces pombe (Spo) SPBC26H8.08c GI:19113443 O74791
Encephalitozoon cuniculi (Ecu) ECU08g0330 GI:19173359 Q8SUT1


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000808
SpoSPBC26H8.08c
GO:0005730 nucleolus C
IDA
AthAt3g07050
SceS000000808
SpoSPBC26H8.08c
GO:0030687 preribosome, large subunit precursor C
IGI
SceS000000808
GO:0003723 RNA binding F
IDA
SceS000000808
TAS
SpoSPBC26H8.08c
GO:0003924 GTPase activity F
IDA
SceS000000808
ISS
SpoSPBC26H8.08c
GO:0005525 GTP binding F
ISS
AthAt4g02790
At3g07050
TAS
SpoSPBC26H8.08c
GO:0000003 reproduction P
IMP
CelWBGene00003821
GO:0000054 ribosomal subunit export from nucleus P
IMP
SpoSPBC26H8.08c
GO:0000055 ribosomal large subunit export from
nucleus
P
IGI
SceS000000808
IMP
SceS000000808
GO:0002119 nematode larval development P
IMP
CelWBGene00003821
GO:0006184 GTP catabolic process P
ISS
SpoSPBC26H8.08c
GO:0006364 rRNA processing P
IMP
SceS000000808
SpoSPBC26H8.08c
GO:0007281 germ cell development P
IMP
CelWBGene00003821
GO:0008150 biological_process P
ND
AthAt3g07050
At4g02790
GO:0010171 body morphogenesis P
IMP
CelWBGene00003821
GO:0040007 growth P
IMP
CelWBGene00003821
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003821
SpoSPBC26H8.08c
GO:0040014 regulation of multicellular organism
growth
P
IMP
CelWBGene00003821
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00003821
GO:0051301 cell division P
IMP
SpoSPBC26H8.08c
GO:0051729 germline cell cycle switching, mitotic to meiotic
cell cycle
P
IMP
CelWBGene00003821

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
101579

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) grn1
(SPBC26H8.08c)
GI:19113443 O74791
Saccharomyces cerevisiae (Sce) NUG1
(S000000808)
GI:6320842 P40010
Kluyveromyces lactis (Kla) KLLA0D13618g GI:50307383
Eremothecium gossypii (Ego) AGOS_ADR008W GI:45187881
Magnaporthe grisea (Mgr) MGG_00188 GI:39975331
Neurospora crassa (Ncr) NCU03066.1 GI:32420117


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000808
SpoSPBC26H8.08c
GO:0005730 nucleolus C
IDA
SceS000000808
SpoSPBC26H8.08c
GO:0030687 preribosome, large subunit precursor C
IGI
SceS000000808
GO:0003723 RNA binding F
IDA
SceS000000808
TAS
SpoSPBC26H8.08c
GO:0003924 GTPase activity F
IDA
SceS000000808
ISS
SpoSPBC26H8.08c
GO:0005525 GTP binding F
TAS
SpoSPBC26H8.08c
GO:0000054 ribosomal subunit export from nucleus P
IMP
SpoSPBC26H8.08c
GO:0000055 ribosomal large subunit export from
nucleus
P
IGI
SceS000000808
IMP
SceS000000808
GO:0006184 GTP catabolic process P
ISS
SpoSPBC26H8.08c
GO:0006364 rRNA processing P
IMP
SceS000000808
SpoSPBC26H8.08c
GO:0040010 positive regulation of growth rate P
IMP
SpoSPBC26H8.08c
GO:0051301 cell division P
IMP
SpoSPBC26H8.08c

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1613

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga7068 ENSANGP00000012225
Ashbya gossypii (Ago) ago1749 ADR008W
Arabidopsis thaliana (Ath) ath12790 At3g07050.1
Caenorhabditis elegans (Cel) cel11568 K01C8.9
(CE02270;
WBGene00003821)
Candida glabrata (Cgl) cgl2488 CAGL0H09724g
Cryptococcus neoformans (Cne) cne5263 179.m00112
Dictyostelium discoideum (Ddi) ddi7028 DDB0187301
Debaryomyces hansenii (Dha) dha3116 DEHA0D18183g
Drosophila melanogaster (Dme) dme13023 CG3983-PA
(FBgn0038473)
Drosophila melanogaster (Dme) dme13022 CG3983-PB
(FBgn0038473)
Danio rerio (Dre) dre2756 ENSDARP00000005405
(gnl3l)
Q58EC7
Danio rerio (Dre) dre24372 ENSDARP00000009392
(gnl3)
Q6DRP2
Danio rerio (Dre) dre24371 ENSDARP00000024075
Takifugu rubripes (Fru) fru10821 SINFRUP00000128565
Takifugu rubripes (Fru) fru23132 SINFRUP00000164824
Takifugu rubripes (Fru) fru10820 SINFRUP00000167239
Gallus gallus (Gga) gga4931 ENSGALP00000002452
(GNL3)
Gallus gallus (Gga) gga4932 ENSGALP00000002453
Gallus gallus (Gga) gga4933 ENSGALP00000002454
Homo sapiens (Hsa) hsa22625 ENSP00000296301
Homo sapiens (Hsa) hsa32855 ENSP00000338573
(GNL3L)
Q9NVN8
Homo sapiens (Hsa) hsa22626 ENSP00000346542
(GNL3)
Q9BVP2-2
Homo sapiens (Hsa) hsa32856 ENSP00000354091
(GNL3L)
Q9NVN8
Kluyveromyces lactis (Kla) kla2669 KLLA0D13618g
Mus musculus (Mmu) mmu29720 ENSMUSP00000026297
(MGI:2448557)
Q6PGG6
Mus musculus (Mmu) mmu7860 ENSMUSP00000047119
(MGI:1353651)
Q8CI11-1
Neurospora crassa (Ncr) ncr2971 NCU03066.2
Oryza sativa (Osa) osa11756 2803.m00167
Oryza sativa (Osa) osa11784 2804.m00120
Rattus norvegicus (Rno) rno31182 ENSRNOP00000003397
(RGD:1600217)
Rattus norvegicus (Rno) rno11998 ENSRNOP00000035860
(RGD:631354)
Q811S9
Saccharomyces cerevisiae (Sce) sce1716 YER006W
(S000000808)
Schizosaccharomyces pombe (Spo) spo913 SPBC26H8.08c O74791
Yarrowia lipolytica (Yli) yli6259 YALI0F21725g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2448557
GO:0005634 nucleus C
IDA
SceS000000808
SpoSPBC26H8.08c
ISO
MmuMGI:1353651
GO:0005654 nucleoplasm C
IDA
MmuMGI:1353651
GO:0005730 nucleolus C
IDA
AthAt3g07050
DmeFBgn0038473
MmuMGI:1353651
SceS000000808
SpoSPBC26H8.08c
ISO
MmuMGI:1353651
GO:0030687 preribosome, large subunit precursor C
IGI
SceS000000808
GO:0003674 molecular_function F
ND
MmuMGI:2448557
GO:0003723 RNA binding F
IDA
SceS000000808
TAS
SpoSPBC26H8.08c
GO:0003924 GTPase activity F
IDA
SceS000000808
ISS
SpoSPBC26H8.08c
GO:0005515 protein binding F
IPI
MmuMGI:1353651
GO:0005525 GTP binding F
IDA
MmuMGI:1353651
ISO
MmuMGI:1353651
ISS
AthAt3g07050
TAS
SpoSPBC26H8.08c
GO:0000003 reproduction P
IMP
CelWBGene00003821
GO:0000054 ribosomal subunit export from nucleus P
IMP
SpoSPBC26H8.08c
GO:0000055 ribosomal large subunit export from
nucleus
P
IGI
SceS000000808
IMP
SceS000000808
GO:0002119 nematode larval development P
IMP
CelWBGene00003821
GO:0006184 GTP catabolic process P
ISS
SpoSPBC26H8.08c
GO:0006364 rRNA processing P
IMP
SceS000000808
SpoSPBC26H8.08c
GO:0007281 germ cell development P
IMP
CelWBGene00003821
GO:0008150 biological_process P
ND
AthAt3g07050
MmuMGI:2448557
GO:0008283 cell proliferation P
ISO
MmuMGI:1353651
GO:0010171 body morphogenesis P
IMP
CelWBGene00003821
GO:0040007 growth P
IMP
CelWBGene00003821
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003821
SpoSPBC26H8.08c
GO:0040014 regulation of multicellular organism
growth
P
IMP
CelWBGene00003821
DmeFBgn0038473
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00003821
GO:0042127 regulation of cell proliferation P
ISO
MmuMGI:1353651
GO:0046626 regulation of insulin receptor signaling
pathway
P
IMP
DmeFBgn0038473
GO:0051301 cell division P
IMP
SpoSPBC26H8.08c
GO:0051729 germline cell cycle switching, mitotic to meiotic
cell cycle
P
IMP
CelWBGene00003821

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPBC26H8.08c
(O74791)
YER006W
(S000000808)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000808
SpoSPBC26H8.08c
GO:0005730 nucleolus C
IDA
SceS000000808
SpoSPBC26H8.08c
GO:0030687 preribosome, large subunit precursor C
IGI
SceS000000808
GO:0003723 RNA binding F
IDA
SceS000000808
TAS
SpoSPBC26H8.08c
GO:0003924 GTPase activity F
IDA
SceS000000808
ISS
SpoSPBC26H8.08c
GO:0005525 GTP binding F
TAS
SpoSPBC26H8.08c
GO:0000054 ribosomal subunit export from nucleus P
IMP
SpoSPBC26H8.08c
GO:0000055 ribosomal large subunit export from
nucleus
P
IGI
SceS000000808
IMP
SceS000000808
GO:0006184 GTP catabolic process P
ISS
SpoSPBC26H8.08c
GO:0006364 rRNA processing P
IMP
SceS000000808
SpoSPBC26H8.08c
GO:0040010 positive regulation of growth rate P
IMP
SpoSPBC26H8.08c
GO:0051301 cell division P
IMP
SpoSPBC26H8.08c

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Search for gene by ID or name:

Query species:

Include wild-cards:   

Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk