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Search term: YER036C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name ARB1
SGD link S000000838
Alternative ID YER036C
Description ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis, has similarity to Gcn20p; shuttles from nucleus to cytoplasm, physically interacts with Tif6p, Lsg1p
Synonyms YER036C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0927 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Predicted transporter (ABC superfamily)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g09930 GI:15242548
Arabidopsis thaliana (Ath) At5g60790 GI:15239436
Arabidopsis thaliana (Ath) At5g64840 GI:15238261
Caenorhabditis elegans (Cel) CE18971
(WBGene00012097)		 GI:17555318 Q9XTD9
Drosophila melanogaster (Dme) 7293109
(FBgn0030672)		 GI:18859989 Q9VXR5
Homo sapiens (Hsa) Hs10947137
(ABCF2)		 GI:10947137 Q9UG63
Homo sapiens (Hsa) Hs22041324 GI:22041324
Saccharomyces cerevisiae (Sce) YDR061w GI:6320266 Q12298
Saccharomyces cerevisiae (Sce) YER036c
(S000000838)		 GI:6320874 P40024
Schizosaccharomyces pombe (Spo) SPAC323.04 GI:19115286 Q9UT95
Schizosaccharomyces pombe (Spo) SPBC16H5.08c GI:19112731 O42943
Schizosaccharomyces pombe (Spo) SPCC825.01 GI:19075551 Q9USH9
Arabidopsis thaliana (Ath) At5g09930 GI:15242548
Arabidopsis thaliana (Ath) At5g60790 GI:15239436
Arabidopsis thaliana (Ath) At5g64840 GI:15238261
Caenorhabditis elegans (Cel) CE18971
(WBGene00012097)		 GI:17555318 Q9XTD9
Drosophila melanogaster (Dme) 7293109
(FBgn0030672)		 GI:18859989 Q9VXR5
Homo sapiens (Hsa) Hs10947137
(ABCF2)		 GI:10947137 Q9UG63
Homo sapiens (Hsa) Hs22041324 GI:22041324
Saccharomyces cerevisiae (Sce) YDR061w GI:6320266 Q12298
Saccharomyces cerevisiae (Sce) YER036c
(S000000838)		 GI:6320874 P40024
Schizosaccharomyces pombe (Spo) SPAC323.04 GI:19115286 Q9UT95
Schizosaccharomyces pombe (Spo) SPBC16H5.08c GI:19112731 O42943
Schizosaccharomyces pombe (Spo) SPCC825.01 GI:19075551 Q9USH9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000838
GO:0005737 cytoplasm C
IDA
SceS000000838
ISS
SpoSPBC16H5.08c
NAS
SpoSPCC825.01
GO:0005739 mitochondrion C
IDA
SceYDR061w
SpoSPAC323.04
ISS
SpoSPAC323.04
GO:0005740 mitochondrial envelope C
TAS
HsaABCF2
GO:0005829 cytosol C
IDA
SpoSPBC16H5.08c
SPCC825.01
GO:0005840 ribosome C
IDA
SceS000000838
GO:0005886 plasma membrane C
IDA
AthAt5g60790
GO:0016020 membrane C
ISS
SpoSPAC323.04
GO:0043190 ATP-binding cassette (ABC) transporter
complex		 C
ISS
DmeFBgn0030672
TAS
HsaABCF2
GO:0003674 molecular_function F
ND
SceYDR061w
GO:0005215 transporter activity F
ISS
AthAt5g60790
At5g64840
At5g09930
DmeFBgn0030672
TAS
HsaABCF2
GO:0005524 ATP binding F
ISS
SpoSPBC16H5.08c
SPAC323.04
NAS
SpoSPCC825.01
GO:0016887 ATPase activity F
ISS
SpoSPAC323.04
SPBC16H5.08c
NAS
SpoSPCC825.01
RCA
SceYDR061w
GO:0042624 ATPase activity, uncoupled F
IMP
SceS000000838
GO:0042626 ATPase activity, coupled to transmembrane movement
of substances		 F
ISS
DmeFBgn0030672
GO:0000056 ribosomal small subunit export from
nucleus		 P
IMP
SceS000000838
ISS
SpoSPBC16H5.08c
NAS
SpoSPCC825.01
GO:0006200 ATP catabolic process P
ISS
SpoSPAC323.04
SPBC16H5.08c
NAS
SpoSPCC825.01
GO:0006810 transport P
TAS
HsaABCF2
GO:0008150 biological_process P
ND
SceYDR061w
GO:0009624 response to nematode P
IEP
AthAt5g64840
GO:0042254 ribosome biogenesis P
IMP
SceS000000838
ISS
SpoSPBC16H5.08c
NAS
SpoSPCC825.01

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
98127

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) ARB1
(S000000838)		 GI:6320874 P40024
Kluyveromyces lactis (Kla) KLLA0A01452g GI:50302259
Eremothecium gossypii (Ego) AGOS_AFR232C GI:45198750
Magnaporthe grisea (Mgr) MGG_11862 GI:145605962
Neurospora crassa (Ncr) NCU08920.1 GI:32421737


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000838
GO:0005737 cytoplasm C
IDA
SceS000000838
GO:0005840 ribosome C
IDA
SceS000000838
GO:0042624 ATPase activity, uncoupled F
IMP
SceS000000838
GO:0000056 ribosomal small subunit export from
nucleus		 P
IMP
SceS000000838
GO:0042254 ribosome biogenesis P
IMP
SceS000000838

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2127

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4914 ENSANGP00000010790
Ashbya gossypii (Ago) ago3424 AFR232C
Arabidopsis thaliana (Ath) ath28165 At5g60790.1
Caenorhabditis elegans (Cel) cel16541 T27E9.7
(CE18971;
WBGene00012097)
Candida glabrata (Cgl) cgl518 CAGL0C02343g
Cryptococcus neoformans (Cne) cne741 163.m03786
Dictyostelium discoideum (Ddi) ddi12908 DDB0191228
Debaryomyces hansenii (Dha) dha5847 DEHA0G03410g
Drosophila melanogaster (Dme) dme17981 CG9281-PB
(FBgn0030672)
Drosophila melanogaster (Dme) dme17982 CG9281-PC
(FBgn0030672)
Danio rerio (Dre) dre11381 ENSDARP00000007351
Danio rerio (Dre) dre21807 ENSDARP00000019793
Takifugu rubripes (Fru) fru14593 SINFRUP00000133363
Takifugu rubripes (Fru) fru19863 SINFRUP00000142556
Takifugu rubripes (Fru) fru19862 SINFRUP00000170677
Gallus gallus (Gga) gga26387 ENSGALP00000021752
(ABCF2)		 Q5ZM62
Homo sapiens (Hsa) hsa29715 ENSP00000222388
(ABCF2)		 Q75MJ1
Homo sapiens (Hsa) hsa29716 ENSP00000287844
(ABCF2)		 Q9UG63
Kluyveromyces lactis (Kla) kla60 KLLA0A01452g
Mus musculus (Mmu) mmu19769 ENSMUSP00000030795
(MGI:1351657)		 Q99LE6
Neurospora crassa (Ncr) ncr8693 NCU08920.2
Oryza sativa (Osa) osa15873 3052.m00134
Oryza sativa (Osa) osa65651 6765.m00161
Oryza sativa (Osa) osa65667 6765.m00169
Oryza sativa (Osa) osa65668 6765.m00170
Oryza sativa (Osa) osa71506 7034.m00138
Rattus norvegicus (Rno) rno20604 ENSRNOP00000014718
(RGD:1304942)		 A2VD14
Saccharomyces cerevisiae (Sce) sce1750 YER036C
(S000000838)
Schizosaccharomyces pombe (Spo) spo3834 SPBC16H5.08c O42943
Yarrowia lipolytica (Yli) yli3660 YALI0D22803g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000838
GO:0005737 cytoplasm C
IDA
SceS000000838
ISS
SpoSPBC16H5.08c
GO:0005739 mitochondrion C
IDA
MmuMGI:1351657
GO:0005829 cytosol C
IDA
SpoSPBC16H5.08c
GO:0005840 ribosome C
IDA
SceS000000838
GO:0005886 plasma membrane C
IDA
AthAt5g60790
GO:0043190 ATP-binding cassette (ABC) transporter
complex		 C
ISS
DmeFBgn0030672
GO:0005215 transporter activity F
ISS
AthAt5g60790
DmeFBgn0030672
GO:0005524 ATP binding F
ISS
SpoSPBC16H5.08c
GO:0016887 ATPase activity F
ISS
SpoSPBC16H5.08c
GO:0042624 ATPase activity, uncoupled F
IMP
SceS000000838
GO:0042626 ATPase activity, coupled to transmembrane movement
of substances		 F
ISS
DmeFBgn0030672
GO:0000056 ribosomal small subunit export from
nucleus		 P
IMP
SceS000000838
ISS
SpoSPBC16H5.08c
GO:0006200 ATP catabolic process P
ISS
SpoSPBC16H5.08c
GO:0042254 ribosome biogenesis P
IMP
SceS000000838
ISS
SpoSPBC16H5.08c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC16H5.08c
(O42943)		 YER036C
(S000000838)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000838
GO:0005737 cytoplasm C
IDA
SceS000000838
ISS
SpoSPBC16H5.08c
GO:0005829 cytosol C
IDA
SpoSPBC16H5.08c
GO:0005840 ribosome C
IDA
SceS000000838
GO:0005524 ATP binding F
ISS
SpoSPBC16H5.08c
GO:0016887 ATPase activity F
ISS
SpoSPBC16H5.08c
GO:0042624 ATPase activity, uncoupled F
IMP
SceS000000838
GO:0000056 ribosomal small subunit export from
nucleus		 P
IMP
SceS000000838
ISS
SpoSPBC16H5.08c
GO:0006200 ATP catabolic process P
ISS
SpoSPBC16H5.08c
GO:0042254 ribosome biogenesis P
IMP
SceS000000838
ISS
SpoSPBC16H5.08c

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GO info in one table:

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