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Search term: YER056C-A


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL34A
SGD link S000002135
Alternative ID YER056C-A
Description Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Bp and has similarity to rat L34 ribosomal protein
Synonyms YER056C-A
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1790 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60s ribosomal protein L34

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g26880 GI:15223377
Arabidopsis thaliana (Ath) At1g69620 GI:15222385
Arabidopsis thaliana (Ath) At3g28900 GI:15228528
Caenorhabditis elegans (Cel) CE26911
(WBGene00004448)
GI:17539134 A3QMC5
Drosophila melanogaster (Dme) 7299171 GI:7299171 Q9VHE5
Drosophila melanogaster (Dme) 7301438_1 GI:7301438
Homo sapiens (Hsa) Hs16117787
(RPL34)
GI:16117787 P49207
Homo sapiens (Hsa) Hs17483362 GI:17483362
Homo sapiens (Hsa) Hs18570634 GI:18570634
Homo sapiens (Hsa) Hs20471957 GI:20471957
Homo sapiens (Hsa) Hs20548753 GI:20548753
Homo sapiens (Hsa) Hs20556223 GI:20556223
Homo sapiens (Hsa) Hs22042308 GI:22042308
Saccharomyces cerevisiae (Sce) YER056c-a
(S000002135)
GI:9755331 P87262
Saccharomyces cerevisiae (Sce) YIL052c
(S000001314)
GI:6322137 P40525
Schizosaccharomyces pombe (Spo) SPAC23A1.08c GI:19115350 O42846
Schizosaccharomyces pombe (Spo) SPCC1322.15 GI:19075643 Q9URT8
Encephalitozoon cuniculi (Ecu) ECU03g0710 GI:19173031 Q8SSA2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt1g26880
SpoSPCC1322.15
GO:0005829 cytosol C
EXP
HsaRPL34
IDA
SpoSPAC23A1.08c
SPCC1322.15
GO:0005840 ribosome C
ISS
AthAt1g26880
At1g69620
At3g28900
GO:0005886 plasma membrane C
IDA
AthAt1g69620
GO:0009507 chloroplast C
IDA
AthAt1g26880
GO:0015934 large ribosomal subunit C
TAS
AthAt1g69620
GO:0016020 membrane C
IDA
AthAt1g69620
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt1g69620
At3g28900
ISS
SpoSPCC1322.15
SPAC23A1.08c
TAS
HsaRPL34
SceS000001314
S000002135
GO:0022626 cytosolic ribosome C
IDA
AthAt3g28900
GO:0003723 RNA binding F
TAS
HsaRPL34
GO:0003735 structural constituent of ribosome F
ISS
AthAt3g28900
At1g69620
At1g26880
SpoSPAC23A1.08c
SPCC1322.15
TAS
SceS000001314
S000002135
GO:0005515 protein binding F
IPI
HsaRPL34
GO:0002119 nematode larval development P
IMP
CelWBGene00004448
GO:0006412 translation P
ISS
AthAt1g69620
At3g28900
At1g26880
SpoSPAC23A1.08c
SPCC1322.15
TAS
AthAt1g69620
HsaRPL34
SceS000001314
S000002135
GO:0006414 translational elongation P
EXP
HsaRPL34
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004448
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004448
GO:0040007 growth P
IMP
CelWBGene00004448
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004448
GO:0042254 ribosome biogenesis P
ISS
AthAt1g69620
At3g28900
At1g26880

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
105146

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) RPL34 GI:16117787 P49207
Pan troglodytes (Ptr) RPL34 GI:114595604
Mus musculus (Mmu) Rpl34
(MGI:1915686)
GI:55741555 Q9D1R9
Mus musculus (Mmu) Gm4705 GI:149268895
Rattus norvegicus (Rno) Rpl34 GI:109465584
Drosophila melanogaster (Dme) RpL34b
(FBgn0037686)
GI:24645341
Drosophila melanogaster (Dme) RpL34a
(FBgn0039406)
GI:24650253
Anopheles gambiae (Aga) AgaP_AGAP009324 GI:58379579
Caenorhabditis elegans (Cel) rpl-34
(CE26911;
WBGene00004448)
GI:17539134 A3QMC5
Schizosaccharomyces pombe (Spo) rpl34
(SPAC23A1.08c)
GI:19075643 O42846
Schizosaccharomyces pombe (Spo) rpl34
(SPAC23A1.08c)
GI:19115350 O42846
Saccharomyces cerevisiae (Sce) RPL34B
(S000001314)
GI:6322137 P40525
Saccharomyces cerevisiae (Sce) RPL34A
(S000002135)
GI:9755331 P87262
Kluyveromyces lactis (Kla) KLLA0C08371g GI:50305227
Eremothecium gossypii (Ego) AGOS_ADL078C GI:45187795
Magnaporthe grisea (Mgr) MGG_05296 GI:39939888
Neurospora crassa (Ncr) NCU07857.1 GI:32416170
Arabidopsis thaliana (Ath) AT3G28900 GI:15228528
Arabidopsis thaliana (Ath) AT1G26880 GI:15223377
Arabidopsis thaliana (Ath) RPL34 GI:15222385
Oryza sativa (Osa) Os08g0156800 GI:115474859
Oryza sativa (Osa) Os08g0436800 GI:115476588
Plasmodium falciparum (Pfa) PF07_0043 GI:124511772


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1915686
GO:0005730 nucleolus C
IDA
AthAt1g26880
GO:0005739 mitochondrion C
IDA
MmuMGI:1915686
GO:0005829 cytosol C
EXP
HsaRPL34
IDA
SpoSPAC23A1.08c
GO:0005840 ribosome C
ISS
AthAt1g26880
At3g28900
GO:0009507 chloroplast C
IDA
AthAt1g26880
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g28900
ISS
DmeFBgn0039406
FBgn0037686
SpoSPAC23A1.08c
TAS
HsaRPL34
SceS000001314
S000002135
GO:0022626 cytosolic ribosome C
IDA
AthAt3g28900
GO:0003674 molecular_function F
ND
MmuMGI:1915686
GO:0003723 RNA binding F
TAS
HsaRPL34
GO:0003735 structural constituent of ribosome F
ISS
AthAt3g28900
At1g26880
DmeFBgn0039406
FBgn0037686
SpoSPAC23A1.08c
TAS
SceS000001314
S000002135
GO:0005515 protein binding F
IPI
DmeFBgn0039406
HsaRPL34
GO:0002119 nematode larval development P
IMP
CelWBGene00004448
GO:0006412 translation P
ISS
AthAt3g28900
At1g26880
DmeFBgn0037686
SpoSPAC23A1.08c
TAS
HsaRPL34
SceS000001314
S000002135
GO:0006414 translational elongation P
EXP
HsaRPL34
GO:0008150 biological_process P
ND
MmuMGI:1915686
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004448
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004448
GO:0040007 growth P
IMP
CelWBGene00004448
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004448
GO:0042254 ribosome biogenesis P
ISS
AthAt3g28900
At1g26880

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_678

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga11480 ENSANGP00000015238
Ashbya gossypii (Ago) ago1663 ADL078C
Arabidopsis thaliana (Ath) ath2810 At1g26880.1
Arabidopsis thaliana (Ath) ath6232 At1g69620.1
Arabidopsis thaliana (Ath) ath15252 At3g28900.1
Caenorhabditis elegans (Cel) cel3880 C42C1.14
(CE26911;
WBGene00004448)
Candida glabrata (Cgl) cgl5196 CAGL0M12408g
Cryptococcus neoformans (Cne) cne2498 181.m08541
Dictyostelium discoideum (Ddi) ddi13097 DDB0231151
Debaryomyces hansenii (Dha) dha3001 DEHA0D15664g
Debaryomyces hansenii (Dha) dha5465 DEHA0F24167g
Drosophila melanogaster (Dme) dme14564 CG6090-PA
(FBgn0039406)
Drosophila melanogaster (Dme) dme14565 CG6090-PB
(FBgn0039406)
Drosophila melanogaster (Dme) dme11686 CG9354-PA
(FBgn0037686)
Drosophila melanogaster (Dme) dme11685 CG9354-PB
(FBgn0037686)
Danio rerio (Dre) dre31025 ENSDARP00000040770
(rpl34)
Q7ZWJ7
Danio rerio (Dre) dre31024 ENSDARP00000042266
Encephalitozoon cuniculi (Ecu) ecu438 19173031
Takifugu rubripes (Fru) fru26063 SINFRUP00000131584
Gallus gallus (Gga) gga25632 ENSGALP00000015689
Gallus gallus (Gga) gga17491 ENSGALP00000017121
Homo sapiens (Hsa) hsa24513 ENSP00000226734
Homo sapiens (Hsa) hsa24512 ENSP00000353035
Kluyveromyces lactis (Kla) kla1571 KLLA0C08371g
Mus musculus (Mmu) mmu22083 ENSMUSP00000072751
Mus musculus (Mmu) mmu12042 ENSMUSP00000077241
Mus musculus (Mmu) mmu17562 ENSMUSP00000078092
(MGI:1915686)
Q9D1R9
Mus musculus (Mmu) mmu7589 ENSMUSP00000080380
(GI:623174)
Neurospora crassa (Ncr) ncr7653 NCU07857.2
Oryza sativa (Osa) osa20016 3513.m00066
Oryza sativa (Osa) osa22020 3618.m00152
Oryza sativa (Osa) osa33451 4635.m00188
Oryza sativa (Osa) osa34299 4670.m00174
Oryza sativa (Osa) osa36870 4966.m00141
Oryza sativa (Osa) osa76646 7303.m00123
Plasmodium falciparum (Pfa) pfa2373 PF07_0043
Rattus norvegicus (Rno) rno17020 ENSRNOP00000009046
(RGD:1309402)
B2RZD4
Saccharomyces cerevisiae (Sce) sce1777 YER056C-A
(S000002135)
Saccharomyces cerevisiae (Sce) sce3068 YIL052C
(S000001314)
Schizosaccharomyces pombe (Spo) spo4062 SPAC23A1.08c O42846
Schizosaccharomyces pombe (Spo) spo3857 SPCC1322.15 Q9URT8
Yarrowia lipolytica (Yli) yli1921 YALI0C05082g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1915686
GO:0005730 nucleolus C
IDA
AthAt1g26880
SpoSPCC1322.15
GO:0005739 mitochondrion C
IDA
MmuMGI:1915686
GO:0005829 cytosol C
IDA
SpoSPAC23A1.08c
SPCC1322.15
GO:0005840 ribosome C
ISS
AthAt1g26880
At1g69620
At3g28900
GO:0005886 plasma membrane C
IDA
AthAt1g69620
GO:0009507 chloroplast C
IDA
AthAt1g26880
GO:0015934 large ribosomal subunit C
TAS
AthAt1g69620
GO:0016020 membrane C
IDA
AthAt1g69620
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt1g69620
At3g28900
ISS
DmeFBgn0039406
FBgn0037686
SpoSPCC1322.15
SPAC23A1.08c
TAS
SceS000001314
S000002135
GO:0022626 cytosolic ribosome C
IDA
AthAt3g28900
GO:0003674 molecular_function F
ND
MmuMGI:1915686
GO:0003735 structural constituent of ribosome F
ISS
AthAt3g28900
At1g69620
At1g26880
DmeFBgn0039406
FBgn0037686
SpoSPAC23A1.08c
SPCC1322.15
TAS
SceS000001314
S000002135
GO:0005515 protein binding F
IPI
DmeFBgn0039406
GO:0002119 nematode larval development P
IMP
CelWBGene00004448
GO:0006412 translation P
ISS
AthAt1g69620
At3g28900
At1g26880
DmeFBgn0037686
SpoSPAC23A1.08c
SPCC1322.15
TAS
AthAt1g69620
SceS000001314
S000002135
GO:0008150 biological_process P
ND
MmuMGI:1915686
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00004448
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00004448
GO:0040007 growth P
IMP
CelWBGene00004448
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004448
GO:0042254 ribosome biogenesis P
ISS
AthAt1g69620
At3g28900
At1g26880

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC1322.15
(Q9URT8)
YER056C-A
(S000002135)
SPAC23A1.08c
(O42846)
YER056C-A
(S000002135)