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Search term: YER094C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PUP3
SGD link S000000896
Alternative ID YER094C
Description Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism; human homolog is subunit C10
Synonyms YER094C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0180 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING 20S proteasome, regulatory subunit beta type PSMB3/PUP3

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g21720 GI:19928159
Arabidopsis thaliana (Ath) At1g77440 GI:12323391
Caenorhabditis elegans (Cel) CE07571
(WBGene00003949)		 GI:17535357 Q23237
Drosophila melanogaster (Dme) 7299121 GI:17380236
Homo sapiens (Hsa) Hs22059276 GI:22059276
Homo sapiens (Hsa) Hs4506197 GI:4506197
Saccharomyces cerevisiae (Sce) YER094c
(S000000896)		 GI:6320941 P25451
Schizosaccharomyces pombe (Spo) SPCC63.12c GI:19075485 Q9Y7T8
Encephalitozoon cuniculi (Ecu) ECU02g0340 GI:19073955 Q8SSI0
Arabidopsis thaliana (Ath) At1g21720 GI:19928159
Arabidopsis thaliana (Ath) At1g77440 GI:12323391
Caenorhabditis elegans (Cel) CE07571
(WBGene00003949)		 GI:17535357 Q23237
Drosophila melanogaster (Dme) 7299121 GI:17380236
Homo sapiens (Hsa) Hs22059276 GI:22059276
Homo sapiens (Hsa) Hs4506197 GI:4506197
Saccharomyces cerevisiae (Sce) YER094c
(S000000896)		 GI:6320941 P25451
Schizosaccharomyces pombe (Spo) SPCC63.12c GI:19075485 Q9Y7T8
Encephalitozoon cuniculi (Ecu) ECU02g0340 GI:19073955 Q8SSI0
Arabidopsis thaliana (Ath) At1g21720 GI:19928159
Arabidopsis thaliana (Ath) At1g77440 GI:12323391
Caenorhabditis elegans (Cel) CE07571
(WBGene00003949)		 GI:17535357 Q23237
Drosophila melanogaster (Dme) 7299121 GI:17380236
Homo sapiens (Hsa) Hs22059276 GI:22059276
Homo sapiens (Hsa) Hs4506197 GI:4506197
Saccharomyces cerevisiae (Sce) YER094c
(S000000896)		 GI:6320941 P25451
Schizosaccharomyces pombe (Spo) SPCC63.12c GI:19075485 Q9Y7T8
Encephalitozoon cuniculi (Ecu) ECU02g0340 GI:19073955 Q8SSI0


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SceS000000896
IDA
SpoSPCC63.12c
TAS
SpoSPCC63.12c
GO:0005789 endoplasmic reticulum membrane C
IC
SceS000000896
GO:0005829 cytosol C
IDA
SpoSPCC63.12c
GO:0005839 proteasome core complex C
TAS
AthAt1g77440
At1g21720
GO:0005886 plasma membrane C
IDA
AthAt1g21720
GO:0019774 proteasome core complex, beta-subunit
complex		 C
IDA
SceS000000896
ISS
SpoSPCC63.12c
GO:0031597 cytosolic proteasome complex C
RCA
SceS000000896
GO:0034515 proteasome storage granule C
IC
SceS000000896
RCA
SceS000000896
GO:0004175 endopeptidase activity F
ISS
SpoSPCC63.12c
GO:0008233 peptidase activity F
ISS
AthAt1g77440
At1g21720
GO:0061133 endopeptidase activator activity F
IGI
SceS000000896
GO:0000003 reproduction P
IMP
CelWBGene00003949
GO:0002119 nematode larval development P
IMP
CelWBGene00003949
GO:0006508 proteolysis P
RCA
SceS000000896
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
TAS
AthAt1g21720
At1g77440
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00003949
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003949
GO:0010499 proteasomal ubiquitin-independent protein
catabolic process		 P
IDA
SceS000000896
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000000896
GO:0040011 locomotion P
IMP
CelWBGene00003949
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process		 P
IDA
SceS000000896
NAS
SpoSPCC63.12c

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
2089

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) PSMB3 GI:22538465
Canis familiaris (Cfa) PSMB3 GI:57091113
Mus musculus (Mmu) Psmb3
(MGI:1347014)		 GI:6755202 Q545G0
Rattus norvegicus (Rno) Psmb3
(RGD:61875)		 GI:8394082
Gallus gallus (Gga) PSMB3 GI:118102948
Drosophila melanogaster (Dme) Prosbeta3 GI:21355629
Anopheles gambiae (Aga) AgaP_AGAP001697 GI:58395630
Caenorhabditis elegans (Cel) pbs-3
(CE07571;
WBGene00003949)		 GI:17535357 Q23237
Schizosaccharomyces pombe (Spo) SPCC63.12c GI:19075485 Q9Y7T8
Saccharomyces cerevisiae (Sce) PUP3
(S000000896)		 GI:6320941 P25451
Kluyveromyces lactis (Kla) KLLA0E20295g GI:50309707
Magnaporthe grisea (Mgr) MGG_04551 GI:145603039
Neurospora crassa (Ncr) NCU03304.1 GI:32420593
Arabidopsis thaliana (Ath) PBC1 GI:18395025
Arabidopsis thaliana (Ath) PBC2 GI:79321410
Oryza sativa (Osa) Os06g0643100 GI:115469154


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000502 proteasome complex C
NAS
DmeProsbeta3
TAS
HsaPSMB3
GO:0005634 nucleus C
IC
SceS000000896
IDA
SpoSPCC63.12c
TAS
SpoSPCC63.12c
GO:0005789 endoplasmic reticulum membrane C
IC
SceS000000896
GO:0005829 cytosol C
IDA
SpoSPCC63.12c
GO:0005839 proteasome core complex C
IDA
MmuMGI:1347014
ISS
DmeProsbeta3
TAS
AthPBC2
PBC1
GO:0005886 plasma membrane C
IDA
AthPBC1
GO:0019774 proteasome core complex, beta-subunit
complex		 C
IDA
SceS000000896
ISS
SpoSPCC63.12c
GO:0031597 cytosolic proteasome complex C
RCA
SceS000000896
GO:0034515 proteasome storage granule C
IC
SceS000000896
RCA
SceS000000896
GO:0004175 endopeptidase activity F
ISO
MmuMGI:1347014
ISS
DmeProsbeta3
SpoSPCC63.12c
NAS
DmeProsbeta3
GO:0005515 protein binding F
IPI
HsaPSMB3
GO:0008233 peptidase activity F
ISS
AthPBC1
PBC2
GO:0061133 endopeptidase activator activity F
IGI
SceS000000896
GO:0000003 reproduction P
IMP
CelWBGene00003949
GO:0002119 nematode larval development P
IMP
CelWBGene00003949
GO:0006508 proteolysis P
RCA
SceS000000896
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
TAS
AthPBC1
PBC2
GO:0006974 response to DNA damage stimulus P
IMP
DmeProsbeta3
GO:0008152 metabolic process P
ISO
MmuMGI:1347014
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00003949
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003949
GO:0010499 proteasomal ubiquitin-independent protein
catabolic process		 P
IDA
SceS000000896
GO:0030163 protein catabolic process P
TAS
MmuMGI:1347014
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000000896
GO:0031145 anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic
process		 P
EXP
HsaPSMB3
GO:0040011 locomotion P
IMP
CelWBGene00003949
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process		 P
IDA
SceS000000896
NAS
SpoSPCC63.12c
GO:0051436 negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell
cycle		 P
EXP
HsaPSMB3
GO:0051437 positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell
cycle		 P
EXP
HsaPSMB3

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2031

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga3811 ENSANGP00000012182
Ashbya gossypii (Ago) ago811 ABR217C
Arabidopsis thaliana (Ath) ath2330 At1g21720.1
Arabidopsis thaliana (Ath) ath7082 At1g77440.1
Caenorhabditis elegans (Cel) cel18302 Y38A8.2
(CE07571;
WBGene00003949)
Candida glabrata (Cgl) cgl2734 CAGL0I04906g
Cryptococcus neoformans (Cne) cne2122 181.m08132
Dictyostelium discoideum (Ddi) ddi744 DDB0190542
Debaryomyces hansenii (Dha) dha2058 DEHA0C14212g
Drosophila melanogaster (Dme) dme11616 CG11981-PA
(FBgn0026380)
Danio rerio (Dre) dre19144 ENSDARP00000013624
(psmb3)		 Q7ZUJ8
Encephalitozoon cuniculi (Ecu) ecu34 19073955
Takifugu rubripes (Fru) fru22068 SINFRUP00000132901
Gallus gallus (Gga) gga13817 ENSGALP00000002420
(PSMB3)
Homo sapiens (Hsa) hsa13549 ENSP00000225426
(PSMB3)		 P49720
Kluyveromyces lactis (Kla) kla3864 KLLA0E20295g
Mus musculus (Mmu) mmu4692 ENSMUSP00000063560
Neurospora crassa (Ncr) ncr3201 NCU03304.2
Oryza sativa (Osa) osa2386 1909.m00155
Oryza sativa (Osa) osa7124 2495.m00154
Plasmodium falciparum (Pfa) pfa2590 PFA0400c
Rattus norvegicus (Rno) rno5992 ENSRNOP00000017377
(RGD:61875)		 P40112
Rattus norvegicus (Rno) rno19771 ENSRNOP00000045093
Saccharomyces cerevisiae (Sce) sce1831 YER094C
(S000000896)
Schizosaccharomyces pombe (Spo) spo906 SPCC63.12c Q9Y7T8
Yarrowia lipolytica (Yli) yli6285 YALI0F22341g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000502 proteasome complex C
NAS
DmeFBgn0026380
GO:0005634 nucleus C
IC
SceS000000896
IDA
SpoSPCC63.12c
TAS
SpoSPCC63.12c
GO:0005789 endoplasmic reticulum membrane C
IC
SceS000000896
GO:0005829 cytosol C
IDA
SpoSPCC63.12c
GO:0005839 proteasome core complex C
ISS
DmeFBgn0026380
TAS
AthAt1g77440
At1g21720
GO:0005886 plasma membrane C
IDA
AthAt1g21720
GO:0019774 proteasome core complex, beta-subunit
complex		 C
IDA
SceS000000896
ISS
SpoSPCC63.12c
GO:0031597 cytosolic proteasome complex C
RCA
SceS000000896
GO:0034515 proteasome storage granule C
IC
SceS000000896
RCA
SceS000000896
GO:0004175 endopeptidase activity F
ISS
DmeFBgn0026380
SpoSPCC63.12c
NAS
DmeFBgn0026380
GO:0008233 peptidase activity F
ISS
AthAt1g77440
At1g21720
GO:0061133 endopeptidase activator activity F
IGI
SceS000000896
GO:0000003 reproduction P
IMP
CelWBGene00003949
GO:0002119 nematode larval development P
IMP
CelWBGene00003949
GO:0006508 proteolysis P
RCA
SceS000000896
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
TAS
AthAt1g21720
At1g77440
GO:0006974 response to DNA damage stimulus P
IMP
DmeFBgn0026380
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00003949
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003949
GO:0010499 proteasomal ubiquitin-independent protein
catabolic process		 P
IDA
SceS000000896
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000000896
GO:0040011 locomotion P
IMP
CelWBGene00003949
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process		 P
IDA
SceS000000896
NAS
SpoSPCC63.12c

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC63.12c
(Q9Y7T8)		 YER094C
(S000000896)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SceS000000896
IDA
SpoSPCC63.12c
TAS
SpoSPCC63.12c
GO:0005789 endoplasmic reticulum membrane C
IC
SceS000000896
GO:0005829 cytosol C
IDA
SpoSPCC63.12c
GO:0019774 proteasome core complex, beta-subunit
complex		 C
IDA
SceS000000896
ISS
SpoSPCC63.12c
GO:0031597 cytosolic proteasome complex C
RCA
SceS000000896
GO:0034515 proteasome storage granule C
IC
SceS000000896
RCA
SceS000000896
GO:0004175 endopeptidase activity F
ISS
SpoSPCC63.12c
GO:0061133 endopeptidase activator activity F
IGI
SceS000000896
GO:0006508 proteolysis P
RCA
SceS000000896
GO:0010499 proteasomal ubiquitin-independent protein
catabolic process		 P
IDA
SceS000000896
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000000896
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process		 P
IDA
SceS000000896
NAS
SpoSPCC63.12c

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