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Search term: YER161C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SPT2
SGD link S000000963
Alternative ID YER161C
Description Protein involved in negative regulation of transcription; required for RNA polyadenylation; exhibits regulated interactions with both histones and SWI-SNF components, has similarity to mammalian HMG1 proteins
Synonyms YER161C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38965

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SPT2
(S000000963)
GI:6321009
Kluyveromyces lactis (Kla) KLLA0F14487g GI:50311413
Eremothecium gossypii (Ego) AGOS_AGR161C GI:45201257


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000963
GO:0000217 DNA secondary structure binding F
IDA
SceS000000963
GO:0003677 DNA binding F
IDA
SceS000000963
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter
P
IMP
SceS000000963
GO:0006325 chromatin organization P
IMP
SceS000000963
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
IGI
SceS000000963
GO:0043631 RNA polyadenylation P
IGI
SceS000000963
IMP
SceS000000963
GO:0045816 negative regulation of transcription from RNA
polymerase II promoter, global
P
IMP
SceS000000963

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_15151

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago4472 AGR161C
Candida glabrata (Cgl) cgl4584 CAGL0L11704g
Debaryomyces hansenii (Dha) dha4649 DEHA0F05874g
Kluyveromyces lactis (Kla) kla4731 KLLA0F14487g
Neurospora crassa (Ncr) ncr952 NCU00980.2
Saccharomyces cerevisiae (Sce) sce1909 YER161C
(S000000963)
Schizosaccharomyces pombe (Spo) spo629 SPCC1393.02c O94714
Yarrowia lipolytica (Yli) yli3071 YALI0D08734g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000963
SpoSPCC1393.02c
ISS
SpoSPCC1393.02c
GO:0005720 nuclear heterochromatin C
ISS
SpoSPCC1393.02c
GO:0005730 nucleolus C
IDA
SpoSPCC1393.02c
GO:0005819 spindle C
IDA
SpoSPCC1393.02c
GO:0000217 DNA secondary structure binding F
IDA
SceS000000963
GO:0003677 DNA binding F
IDA
SceS000000963
ISS
SpoSPCC1393.02c
GO:0030528 transcription regulator activity F
NAS
SpoSPCC1393.02c
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter
P
IMP
SceS000000963
ISS
SpoSPCC1393.02c
GO:0006325 chromatin organization P
IMP
SceS000000963
GO:0006338 chromatin remodeling P
NAS
SpoSPCC1393.02c
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
IGI
SceS000000963
GO:0043631 RNA polyadenylation P
IGI
SceS000000963
IMP
SceS000000963
GO:0045816 negative regulation of transcription from RNA
polymerase II promoter, global
P
IMP
SceS000000963

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC1393.02c
(O94714)
YER161C
(S000000963)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000000963
SpoSPCC1393.02c
ISS
SpoSPCC1393.02c
GO:0005720 nuclear heterochromatin C
ISS
SpoSPCC1393.02c
GO:0005730 nucleolus C
IDA
SpoSPCC1393.02c
GO:0005819 spindle C
IDA
SpoSPCC1393.02c
GO:0000217 DNA secondary structure binding F
IDA
SceS000000963
GO:0003677 DNA binding F
IDA
SceS000000963
ISS
SpoSPCC1393.02c
GO:0030528 transcription regulator activity F
NAS
SpoSPCC1393.02c
GO:0000122 negative regulation of transcription from RNA
polymerase II promoter
P
IMP
SceS000000963
ISS
SpoSPCC1393.02c
GO:0006325 chromatin organization P
IMP
SceS000000963
GO:0006338 chromatin remodeling P
NAS
SpoSPCC1393.02c
GO:0006368 RNA elongation from RNA polymerase II
promoter
P
IGI
SceS000000963
GO:0043631 RNA polyadenylation P
IGI
SceS000000963
IMP
SceS000000963
GO:0045816 negative regulation of transcription from RNA
polymerase II promoter, global
P
IMP
SceS000000963

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GO info in one table:

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