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Search term: YER168C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CCA1
SGD link S000000970
Alternative ID YER168C
Description ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites
Synonyms YER168C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2159 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING tRNA nucleotidyltransferase/poly(A) polymerase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g22660 GI:15219925
Arabidopsis thaliana (Ath) At1g28090 GI:15217819
Arabidopsis thaliana (Ath) At2g17580 GI:15227866
Arabidopsis thaliana (Ath) At3g48830_1 GI:15229038
Arabidopsis thaliana (Ath) At5g23690 GI:15237809
Caenorhabditis elegans (Cel) CE26815
(WBGene00010089)		 GI:17561424
Drosophila melanogaster (Dme) 7296685 GI:7296685
Homo sapiens (Hsa) Hs7705763 GI:7705763
Saccharomyces cerevisiae (Sce) YER168c
(S000000970)		 GI:6321016 P21269
Schizosaccharomyces pombe (Spo) SPAC1093.04c GI:19115563 Q9UTQ0
Schizosaccharomyces pombe (Spo) SPCC645.10 GI:19075619 Q9Y7U9
Encephalitozoon cuniculi (Ecu) ECU03g1440 GI:19173101 Q8SS78


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g28090
SpoSPAC1093.04c
GO:0005634 nucleus C
NAS
SceS000000970
GO:0005737 cytoplasm C
NAS
SceS000000970
GO:0005739 mitochondrion C
IDA
AthAt1g22660
SceS000000970
GO:0005759 mitochondrial matrix C
IDA
SceS000000970
GO:0005829 cytosol C
IDA
SpoSPCC645.10
GO:0009507 chloroplast C
IDA
AthAt2g17580
GO:0003723 RNA binding F
ISS
AthAt3g48830
At2g17580
At5g23690
At1g28090
GO:0004652 polynucleotide adenylyltransferase
activity		 F
ISS
AthAt3g48830
GO:0004810 tRNA adenylyltransferase activity F
IDA
SceS000000970
ISS
AthAt1g22660
SpoSPCC645.10
SPAC1093.04c
GO:0002119 nematode larval development P
IMP
CelWBGene00010089
GO:0006396 RNA processing P
ISS
AthAt2g17580
At5g23690
At1g28090
At3g48830
GO:0006400 tRNA modification P
IDA
SceS000000970
ISS
SpoSPAC1093.04c
SPCC645.10
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00010089
GO:0008033 tRNA processing P
ISS
AthAt1g22660
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00010089
GO:0040007 growth P
IMP
CelWBGene00010089

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5858

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPCC645.10 GI:19075619 Q9Y7U9
Saccharomyces cerevisiae (Sce) CCA1
(S000000970)		 GI:6321016 P21269
Kluyveromyces lactis (Kla) KLLA0C17688g GI:50306057
Magnaporthe grisea (Mgr) MGG_07089 GI:145612375
Neurospora crassa (Ncr) NCU08022.1 GI:32416500


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
NAS
SceS000000970
GO:0005737 cytoplasm C
NAS
SceS000000970
GO:0005739 mitochondrion C
IDA
SceS000000970
GO:0005759 mitochondrial matrix C
IDA
SceS000000970
GO:0005829 cytosol C
IDA
SpoSPCC645.10
GO:0004810 tRNA adenylyltransferase activity F
IDA
SceS000000970
ISS
SpoSPCC645.10
GO:0006400 tRNA modification P
IDA
SceS000000970
ISS
SpoSPCC645.10

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_460

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga4802 ENSANGP00000010598
Ashbya gossypii (Ago) ago4429 AGR118W
Arabidopsis thaliana (Ath) ath2431 At1g22660.1
Arabidopsis thaliana (Ath) ath2432 At1g22660.2
Arabidopsis thaliana (Ath) ath8603 At2g17580.1
Caenorhabditis elegans (Cel) cel10364 F55B12.4
(CE26815;
WBGene00010089)
Candida glabrata (Cgl) cgl4591 CAGL0L11858g
Cryptococcus neoformans (Cne) cne4835 186.m03714
Dictyostelium discoideum (Ddi) ddi11104 DDB0191978
Debaryomyces hansenii (Dha) dha3959 DEHA0E16225g
Drosophila melanogaster (Dme) dme11102 CG2100-PA
(FBgn0037369)
Danio rerio (Dre) dre20787 ENSDARP00000026059
Escherichia coli (Eco) eco144 16128136
Escherichia coli (Eco) eco2954 16130952
Encephalitozoon cuniculi (Ecu) ecu508 19173101
Takifugu rubripes (Fru) fru16913 SINFRUP00000156703
Gallus gallus (Gga) gga5489 ENSGALP00000027999
Homo sapiens (Hsa) hsa21993 ENSP00000251607
(TRNT1)		 Q96Q11-1
Homo sapiens (Hsa) hsa21992 ENSP00000280591
(TRNT1)		 C9JKA2
Homo sapiens (Hsa) hsa21994 ENSP00000354999
Kluyveromyces lactis (Kla) kla1989 KLLA0C17688g
Mus musculus (Mmu) mmu22440 ENSMUSP00000060900
(MGI:1917297)		 Q8K1J6-1
Neurospora crassa (Ncr) ncr7814 NCU08022.2
Oryza sativa (Osa) osa33418 4536.m00125
Oryza sativa (Osa) osa36646 4945.m00110
Oryza sativa (Osa) osa66308 6783.m00130
Plasmodium falciparum (Pfa) pfa663 PF11_0212
Rattus norvegicus (Rno) rno21936 ENSRNOP00000008527
(RGD:1308857)		 Q4VBH2
Rattus norvegicus (Rno) rno2832 ENSRNOP00000027758
Saccharomyces cerevisiae (Sce) sce1917 YER168C
(S000000970)
Schizosaccharomyces pombe (Spo) spo1095 SPAC1093.04c Q9UTQ0
Schizosaccharomyces pombe (Spo) spo1942 SPCC645.10 Q9Y7U9
Yarrowia lipolytica (Yli) yli2842 YALI0D03267g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SpoSPAC1093.04c
GO:0005634 nucleus C
NAS
SceS000000970
GO:0005737 cytoplasm C
NAS
SceS000000970
GO:0005739 mitochondrion C
IDA
AthAt1g22660
MmuMGI:1917297
SceS000000970
ISA
MmuMGI:1917297
GO:0005759 mitochondrial matrix C
IDA
SceS000000970
GO:0005829 cytosol C
IDA
SpoSPCC645.10
GO:0009507 chloroplast C
IDA
AthAt2g17580
GO:0020011 apicoplast C
ISS
PfaPF11_0212
GO:0003723 RNA binding F
ISS
AthAt2g17580
GO:0004652 polynucleotide adenylyltransferase
activity		 F
ISS
DmeFBgn0037369
GO:0004810 tRNA adenylyltransferase activity F
IDA
SceS000000970
ISS
AthAt1g22660
SpoSPCC645.10
SPAC1093.04c
GO:0009022 tRNA nucleotidyltransferase activity F
ISO
MmuMGI:1917297
GO:0002119 nematode larval development P
IMP
CelWBGene00010089
GO:0006396 RNA processing P
ISS
AthAt2g17580
GO:0006400 tRNA modification P
IDA
SceS000000970
ISS
SpoSPAC1093.04c
SPCC645.10
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00010089
GO:0008033 tRNA processing P
ISO
MmuMGI:1917297
ISS
AthAt1g22660
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00010089
GO:0040007 growth P
IMP
CelWBGene00010089

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC645.10
(Q9Y7U9)		 YER168C
(S000000970)
SPAC1093.04c
(Q9UTQ0)		 YER168C
(S000000970)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SpoSPAC1093.04c
GO:0005634 nucleus C
NAS
SceS000000970
GO:0005737 cytoplasm C
NAS
SceS000000970
GO:0005739 mitochondrion C
IDA
SceS000000970
GO:0005759 mitochondrial matrix C
IDA
SceS000000970
GO:0005829 cytosol C
IDA
SpoSPCC645.10
GO:0004810 tRNA adenylyltransferase activity F
IDA
SceS000000970
ISS
SpoSPCC645.10
SPAC1093.04c
GO:0006400 tRNA modification P
IDA
SceS000000970
ISS
SpoSPAC1093.04c
SPCC645.10

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GO info in one table:

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