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Search term: YFL060C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SNO3
SGD link S000001834
Alternative ID YFL060C
Description Protein of unknown function, nearly identical to Sno2p; expression is induced before the diauxic shift and also in the absence of thiamin
Synonyms YFL060C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3210 A---YP-

KOGs classification KOGs description
METABOLISM Imidazoleglycerol-phosphate synthase subunit H-like

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g60540 GI:15239361
Saccharomyces cerevisiae (Sce) YFL060c
(S000001834)		 GI:14318459 P43544
Saccharomyces cerevisiae (Sce) YMR095c
(S000004701)		 GI:6323742 Q03144
Saccharomyces cerevisiae (Sce) YNL334c
(S000005278)		 GI:6323995 P53823
Schizosaccharomyces pombe (Spo) SPAC222.08c GI:19114059 Q9UTE4


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000005278
S000001834
GO:0005737 cytoplasm C
IDA
SceS000004701
SpoSPAC222.08c
GO:0005829 cytosol C
IDA
AthAt5g60540
GO:0003674 molecular_function F
ND
SceS000005278
S000001834
S000004701
SpoSPAC222.08c
GO:0004359 glutaminase activity F
IDA
AthAt5g60540
ISS
AthAt5g60540
GO:0046982 protein heterodimerization activity F
IPI
AthAt5g60540
GO:0006081 cellular aldehyde metabolic process P
RCA
SceS000004701
S000005278
GO:0006082 organic acid metabolic process P
RCA
SceS000004701
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000004701
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000004701
GO:0006766 vitamin metabolic process P
RCA
SceS000001834
S000004701
S000005278
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000004701
GO:0006916 anti-apoptosis P
IMP
SceS000004701
ISS
SceS000004701
GO:0008614 pyridoxine metabolic process P
IDA
SceS000001834
IMP
SceS000004701
ISS
SceS000005278
S000004701
S000001834
GO:0008615 pyridoxine biosynthetic process P
ISS
AthAt5g60540
SpoSPAC222.08c
GO:0009228 thiamin biosynthetic process P
IMP
SceS000001834
S000005278
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt5g60540
GO:0042819 vitamin B6 biosynthetic process P
IGI
AthAt5g60540
IMP
AthAt5g60540

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
6630

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC222.08c GI:19114059 Q9UTE4
Saccharomyces cerevisiae (Sce) SNO3
(S000001834)		 GI:14318459 P43544
Saccharomyces cerevisiae (Sce) SNO1
(S000004701)		 GI:6323742 Q03144
Saccharomyces cerevisiae (Sce) SNO2
(S000005278)		 GI:6323995 P53823
Kluyveromyces lactis (Kla) KLLA0A00352g GI:50302159
Eremothecium gossypii (Ego) AGOS_ABR123W GI:45185353
Magnaporthe grisea (Mgr) MGG_05981 GI:145603532
Neurospora crassa (Ncr) NCU06549.1 GI:32411847
Arabidopsis thaliana (Ath) PDX2 GI:18424366
Oryza sativa (Osa) Os02g0130100 GI:115444005


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000005278
S000001834
GO:0005737 cytoplasm C
IDA
SceS000004701
SpoSPAC222.08c
GO:0005829 cytosol C
IDA
AthPDX2
GO:0003674 molecular_function F
ND
SceS000005278
S000001834
S000004701
SpoSPAC222.08c
GO:0004359 glutaminase activity F
IDA
AthPDX2
ISS
AthPDX2
GO:0046982 protein heterodimerization activity F
IPI
AthPDX2
GO:0006081 cellular aldehyde metabolic process P
RCA
SceS000004701
S000005278
GO:0006082 organic acid metabolic process P
RCA
SceS000004701
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000004701
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000004701
GO:0006766 vitamin metabolic process P
RCA
SceS000001834
S000004701
S000005278
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000004701
GO:0006916 anti-apoptosis P
IMP
SceS000004701
ISS
SceS000004701
GO:0008614 pyridoxine metabolic process P
IDA
SceS000001834
IMP
SceS000004701
ISS
SceS000005278
S000004701
S000001834
GO:0008615 pyridoxine biosynthetic process P
ISS
AthPDX2
SpoSPAC222.08c
GO:0009228 thiamin biosynthetic process P
IMP
SceS000001834
S000005278
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthPDX2
GO:0042819 vitamin B6 biosynthetic process P
IGI
AthPDX2
IMP
AthPDX2

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3200

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago715 ABR123W
Arabidopsis thaliana (Ath) ath28135 At5g60540.1
Cryptococcus neoformans (Cne) cne3548 176.m02279
Dictyostelium discoideum (Ddi) ddi9517 DDB0215963
Debaryomyces hansenii (Dha) dha4454 DEHA0F01551g
Kluyveromyces lactis (Kla) kla10 KLLA0A00352g
Neurospora crassa (Ncr) ncr6367 NCU06549.2
Oryza sativa (Osa) osa79343 7441.m00112
Oryza sativa (Osa) osa79571 7447.m00122
Plasmodium falciparum (Pfa) pfa1109 PF11_0169
Saccharomyces cerevisiae (Sce) sce2015 YFL060C
(S000001834)
Saccharomyces cerevisiae (Sce) sce4849 YMR095C
(S000004701)
Saccharomyces cerevisiae (Sce) sce5458 YNL334C
(S000005278)
Schizosaccharomyces pombe (Spo) spo4029 SPAC222.08c Q9UTE4
Yarrowia lipolytica (Yli) yli4712 YALI0E20603g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000005278
S000001834
GO:0005737 cytoplasm C
IDA
SceS000004701
SpoSPAC222.08c
GO:0005829 cytosol C
IDA
AthAt5g60540
GO:0003674 molecular_function F
ND
SceS000005278
S000001834
S000004701
SpoSPAC222.08c
GO:0004359 glutaminase activity F
IDA
AthAt5g60540
ISS
AthAt5g60540
GO:0046982 protein heterodimerization activity F
IPI
AthAt5g60540
GO:0006081 cellular aldehyde metabolic process P
RCA
SceS000004701
S000005278
GO:0006082 organic acid metabolic process P
RCA
SceS000004701
GO:0006519 cellular amino acid and derivative metabolic
process		 P
RCA
SceS000004701
GO:0006725 cellular aromatic compound metabolic
process		 P
RCA
SceS000004701
GO:0006766 vitamin metabolic process P
RCA
SceS000001834
S000004701
S000005278
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000004701
GO:0006916 anti-apoptosis P
IMP
SceS000004701
ISS
SceS000004701
GO:0008614 pyridoxine metabolic process P
IDA
SceS000001834
IMP
SceS000004701
ISS
SceS000005278
S000004701
S000001834
GO:0008615 pyridoxine biosynthetic process P
ISS
AthAt5g60540
SpoSPAC222.08c
GO:0009228 thiamin biosynthetic process P
IMP
SceS000001834
S000005278
GO:0009793 embryo development ending in seed
dormancy		 P
NAS
AthAt5g60540
GO:0042819 vitamin B6 biosynthetic process P
IGI
AthAt5g60540
IMP
AthAt5g60540

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC222.08c
(Q9UTE4)		 YFL060C
(S000001834)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000001834
GO:0005737 cytoplasm C
IDA
SpoSPAC222.08c
GO:0003674 molecular_function F
ND
SceS000001834
SpoSPAC222.08c
GO:0006766 vitamin metabolic process P
RCA
SceS000001834
GO:0008614 pyridoxine metabolic process P
IDA
SceS000001834
ISS
SceS000001834
GO:0008615 pyridoxine biosynthetic process P
ISS
SpoSPAC222.08c
GO:0009228 thiamin biosynthetic process P
IMP
SceS000001834

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Query species:

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Search for GO info:  

GO info in one table:

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