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Search term: YFR009W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name GCN20
SGD link S000001905
Alternative ID YFR009W
Description Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn1p; proposed to stimulate Gcn2p activation by an uncharged tRNA
Synonyms YFR009W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0062 ACDHYPE

KOGs classification KOGs description
METABOLISMINFORMATION STORAGE AND PROCESSING ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g64550 GI:15217680
Caenorhabditis elegans (Cel) CE01292
(WBGene00018339)		 GI:17553372 Q20306
Drosophila melanogaster (Dme) 7293774 GI:7293774
Homo sapiens (Hsa) Hs8922936 GI:8922936
Saccharomyces cerevisiae (Sce) YFR009w
(S000001905)		 GI:14318531 P43535
Saccharomyces cerevisiae (Sce) YLR249w_2 GI:6323278
Saccharomyces cerevisiae (Sce) YNL014w_2 GI:6324314 P53978
Saccharomyces cerevisiae (Sce) YPL226w_2 GI:6325030 Q08972
Schizosaccharomyces pombe (Spo) SPAC3C7.08c_2 GI:19114521 O14134
Schizosaccharomyces pombe (Spo) SPBC29A3.09c GI:19112629 O59672
Schizosaccharomyces pombe (Spo) SPCC417.08_2 GI:19075785 O94489
Encephalitozoon cuniculi (Ecu) ECU05g1190 GI:19173659 Q8SRV5
Arabidopsis thaliana (Ath) At1g64550 GI:15217680
Caenorhabditis elegans (Cel) CE01292
(WBGene00018339)		 GI:17553372 Q20306
Drosophila melanogaster (Dme) 7293774 GI:7293774
Homo sapiens (Hsa) Hs8922936 GI:8922936
Saccharomyces cerevisiae (Sce) YFR009w
(S000001905)		 GI:14318531 P43535
Saccharomyces cerevisiae (Sce) YLR249w_2 GI:6323278
Saccharomyces cerevisiae (Sce) YNL014w_2 GI:6324314 P53978
Saccharomyces cerevisiae (Sce) YPL226w_2 GI:6325030 Q08972
Schizosaccharomyces pombe (Spo) SPAC3C7.08c_2 GI:19114521 O14134
Schizosaccharomyces pombe (Spo) SPBC29A3.09c GI:19112629 O59672
Schizosaccharomyces pombe (Spo) SPCC417.08_2 GI:19075785 O94489
Encephalitozoon cuniculi (Ecu) ECU05g1190 GI:19173659 Q8SRV5
Arabidopsis thaliana (Ath) At1g64550 GI:15217680
Caenorhabditis elegans (Cel) CE01292
(WBGene00018339)		 GI:17553372 Q20306
Drosophila melanogaster (Dme) 7293774 GI:7293774
Homo sapiens (Hsa) Hs8922936 GI:8922936
Saccharomyces cerevisiae (Sce) YFR009w
(S000001905)		 GI:14318531 P43535
Saccharomyces cerevisiae (Sce) YLR249w_2 GI:6323278
Saccharomyces cerevisiae (Sce) YNL014w_2 GI:6324314 P53978
Saccharomyces cerevisiae (Sce) YPL226w_2 GI:6325030 Q08972
Schizosaccharomyces pombe (Spo) SPAC3C7.08c_2 GI:19114521 O14134
Schizosaccharomyces pombe (Spo) SPBC29A3.09c GI:19112629 O59672
Schizosaccharomyces pombe (Spo) SPCC417.08_2 GI:19075785 O94489
Encephalitozoon cuniculi (Ecu) ECU05g1190 GI:19173659 Q8SRV5


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPAC3C7.08c
GO:0005829 cytosol C
IDA
SpoSPBC29A3.09c
SPAC3C7.08c
SPCC417.08
IPI
SceS000001905
GO:0022626 cytosolic ribosome C
IDA
SceS000001905
ISS
SpoSPCC417.08
SPBC29A3.09c
GO:0043234 protein complex C
NAS
SpoSPAC3C7.08c
SPCC417.08
GO:0003746 translation elongation factor activity F
ISS
SpoSPCC417.08
GO:0005215 transporter activity F
ISS
AthAt1g64550
GO:0005524 ATP binding F
IC
SpoSPCC417.08
IDA
SpoSPAC3C7.08c
ISS
SpoSPBC29A3.09c
GO:0016887 ATPase activity F
IDA
SpoSPAC3C7.08c
ISS
SceS000001905
SpoSPCC417.08
SPBC29A3.09c
GO:0006200 ATP catabolic process P
IDA
SpoSPAC3C7.08c
ISS
SpoSPBC29A3.09c
SPCC417.08
GO:0006406 mRNA export from nucleus P
IGI
SpoSPAC3C7.08c
GO:0006414 translational elongation P
ISS
SpoSPCC417.08
GO:0006417 regulation of translation P
RCA
SceS000001905
GO:0006448 regulation of translational elongation P
IMP
SceS000001905
IPI
SceS000001905
ISS
SpoSPBC29A3.09c
GO:0016973 poly(A)+ mRNA export from nucleus P
IGI
SpoSPAC3C7.08c
GO:0042274 ribosomal small subunit biogenesis P
ISS
SpoSPAC3C7.08c
GO:0046686 response to cadmium ion P
IEP
AthAt1g64550

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
22784

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) ABCF3 GI:148612853
Pan troglodytes (Ptr) ABCF3 GI:114590707
Canis familiaris (Cfa) ABCF3 GI:74003346
Mus musculus (Mmu) Abcf3
(MGI:1351656)		 GI:29789050 Q8K268
Rattus norvegicus (Rno) Abcf3
(RGD:1310468)		 GI:58865370
Gallus gallus (Gga) ABCF3 GI:118095225
Drosophila melanogaster (Dme) CG9330
(FBgn0036888)		 GI:24666836
Anopheles gambiae (Aga) AgaP_AGAP012005 GI:158300669
Caenorhabditis elegans (Cel) abcf-3
(CE01292;
WBGene00018339)		 GI:17553372 Q20306
Schizosaccharomyces pombe (Spo) SPBC29A3.09c GI:19112629 O59672
Saccharomyces cerevisiae (Sce) GCN20
(S000001905)		 GI:14318531 P43535
Kluyveromyces lactis (Kla) KLLA0A10857g GI:50303071
Eremothecium gossypii (Ego) AGOS_AEL032W GI:45190575
Magnaporthe grisea (Mgr) MGG_11547 GI:145611184
Neurospora crassa (Ncr) NCU04051.1 GI:32405514
Arabidopsis thaliana (Ath) ATGCN3 GI:15217680
Oryza sativa (Osa) Os02g0826500 GI:115449933
Plasmodium falciparum (Pfa) PF11_0225 GI:124804082


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1351656
GO:0005829 cytosol C
IDA
SpoSPBC29A3.09c
IPI
SceS000001905
GO:0016020 membrane C
ISS
PfaPF11_0225
GO:0022626 cytosolic ribosome C
IDA
SceS000001905
ISS
SpoSPBC29A3.09c
GO:0043190 ATP-binding cassette (ABC) transporter
complex		 C
ISS
DmeFBgn0036888
GO:0003674 molecular_function F
ND
MmuMGI:1351656
GO:0005215 transporter activity F
ISS
AthATGCN3
DmeFBgn0036888
GO:0005524 ATP binding F
ISS
SpoSPBC29A3.09c
GO:0016887 ATPase activity F
ISS
SceS000001905
SpoSPBC29A3.09c
GO:0042626 ATPase activity, coupled to transmembrane movement
of substances		 F
ISS
DmeFBgn0036888
PfaPF11_0225
GO:0006200 ATP catabolic process P
ISS
SpoSPBC29A3.09c
GO:0006417 regulation of translation P
ISS
PfaPF11_0225
RCA
SceS000001905
GO:0006448 regulation of translational elongation P
IMP
SceS000001905
IPI
SceS000001905
ISS
SpoSPBC29A3.09c
GO:0006810 transport P
ISS
PfaPF11_0225
GO:0008150 biological_process P
ND
MmuMGI:1351656
GO:0046686 response to cadmium ion P
IEP
AthATGCN3

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_454

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga13061 ENSANGP00000000043
Anopheles gambiae (Aga) aga9164 ENSANGP00000008671
Ashbya gossypii (Ago) ago2474 AEL032W
Arabidopsis thaliana (Ath) ath5669 At1g64550.1
Arabidopsis thaliana (Ath) ath23190 At5g09930.1
Arabidopsis thaliana (Ath) ath28630 At5g64840.1
Caenorhabditis elegans (Cel) cel8856 F42A10.1
(CE01292;
WBGene00018339)
Candida glabrata (Cgl) cgl3971 CAGL0K10472g
Cryptococcus neoformans (Cne) cne3816 185.m02397
Dictyostelium discoideum (Ddi) ddi13092 DDB0219973
Debaryomyces hansenii (Dha) dha6145 DEHA0G09988g
Drosophila melanogaster (Dme) dme10238 CG9330-PA
(FBgn0036888)
Escherichia coli (Eco) eco791 16128788
Escherichia coli (Eco) eco3234 16131231
Encephalitozoon cuniculi (Ecu) ecu1221 19173659
Takifugu rubripes (Fru) fru19864 SINFRUP00000167449
Takifugu rubripes (Fru) fru14589 SINFRUP00000169929
Takifugu rubripes (Fru) fru14587 SINFRUP00000170632
Takifugu rubripes (Fru) fru14591 SINFRUP00000172769
Takifugu rubripes (Fru) fru14588 SINFRUP00000174243
Takifugu rubripes (Fru) fru14590 SINFRUP00000176160
Gallus gallus (Gga) gga23594 ENSGALP00000013803
(ABCF3)
Gallus gallus (Gga) gga23595 ENSGALP00000013804
Gallus gallus (Gga) gga23596 ENSGALP00000013805
Gallus gallus (Gga) gga23597 ENSGALP00000013806
Homo sapiens (Hsa) hsa23539 ENSP00000292808
(ABCF3)		 Q9NUQ8-2
Kluyveromyces lactis (Kla) kla470 KLLA0A10857g
Mus musculus (Mmu) mmu10079 ENSMUSP00000003319
(MGI:1351656)		 Q8K268
Neurospora crassa (Ncr) ncr3927 NCU04051.2
Oryza sativa (Osa) osa25489 3848.m00194
Oryza sativa (Osa) osa37407 4864.m00149
Oryza sativa (Osa) osa37414 4864.m00182
Plasmodium falciparum (Pfa) pfa676 PF11_0225
Rattus norvegicus (Rno) rno7606 ENSRNOP00000002327
(RGD:1310468)		 Q66H39
Saccharomyces cerevisiae (Sce) sce2032 YFR009W
(S000001905)
Schizosaccharomyces pombe (Spo) spo2842 SPBC29A3.09c O59672
Yarrowia lipolytica (Yli) yli4010 YALI0E03674g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1351656
GO:0005829 cytosol C
IDA
SpoSPBC29A3.09c
IPI
SceS000001905
GO:0016020 membrane C
ISS
PfaPF11_0225
GO:0022626 cytosolic ribosome C
IDA
SceS000001905
ISS
SpoSPBC29A3.09c
GO:0043190 ATP-binding cassette (ABC) transporter
complex		 C
ISS
DmeFBgn0036888
GO:0003674 molecular_function F
ND
MmuMGI:1351656
GO:0005215 transporter activity F
ISS
AthAt5g64840
At1g64550
At5g09930
DmeFBgn0036888
GO:0005524 ATP binding F
ISS
SpoSPBC29A3.09c
GO:0016887 ATPase activity F
ISS
SceS000001905
SpoSPBC29A3.09c
GO:0042626 ATPase activity, coupled to transmembrane movement
of substances		 F
ISS
DmeFBgn0036888
PfaPF11_0225
GO:0006200 ATP catabolic process P
ISS
SpoSPBC29A3.09c
GO:0006417 regulation of translation P
ISS
PfaPF11_0225
RCA
SceS000001905
GO:0006448 regulation of translational elongation P
IMP
SceS000001905
IPI
SceS000001905
ISS
SpoSPBC29A3.09c
GO:0006810 transport P
ISS
PfaPF11_0225
GO:0008150 biological_process P
ND
MmuMGI:1351656
GO:0009624 response to nematode P
IEP
AthAt5g64840
GO:0046686 response to cadmium ion P
IEP
AthAt1g64550

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC29A3.09c
(O59672)		 YFR009W
(S000001905)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005829 cytosol C
IDA
SpoSPBC29A3.09c
IPI
SceS000001905
GO:0022626 cytosolic ribosome C
IDA
SceS000001905
ISS
SpoSPBC29A3.09c
GO:0005524 ATP binding F
ISS
SpoSPBC29A3.09c
GO:0016887 ATPase activity F
ISS
SceS000001905
SpoSPBC29A3.09c
GO:0006200 ATP catabolic process P
ISS
SpoSPBC29A3.09c
GO:0006417 regulation of translation P
RCA
SceS000001905
GO:0006448 regulation of translational elongation P
IMP
SceS000001905
IPI
SceS000001905
ISS
SpoSPBC29A3.09c

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