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Search term: YFR023W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PES4
SGD link S000001919
Alternative ID YFR023W
Description Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, similar to Mip6p
Synonyms YFR023W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0123 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSINGINFORMATION STORAGE AND PROCESSING Polyadenylate-binding protein (RRM superfamily)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g22760 GI:15219945
Arabidopsis thaliana (Ath) At1g45100 GI:15219528
Arabidopsis thaliana (Ath) At1g49760 GI:15222813
Arabidopsis thaliana (Ath) At1g71770 GI:15217573
Arabidopsis thaliana (Ath) At2g15500 GI:15226539
Arabidopsis thaliana (Ath) At2g23350 GI:15227815
Arabidopsis thaliana (Ath) At2g36660 GI:15228016
Arabidopsis thaliana (Ath) At3g16380 GI:15228191
Arabidopsis thaliana (Ath) At3g19330_1 GI:15230350
Arabidopsis thaliana (Ath) At3g19350 GI:15230352
Arabidopsis thaliana (Ath) At3g48830_2 GI:15229038
Arabidopsis thaliana (Ath) At3g48840 GI:15229039
Arabidopsis thaliana (Ath) At4g34110 GI:15235241
Arabidopsis thaliana (Ath) At5g03580 GI:15242807
Arabidopsis thaliana (Ath) At5g41690 GI:10178023
Caenorhabditis elegans (Cel) CE02193
(WBGene00003903)
GI:17567133 Q19579
Caenorhabditis elegans (Cel) CE03230 GI:17567131 Q19579
Caenorhabditis elegans (Cel) CE20412
(WBGene00003902)
GI:17510879
Drosophila melanogaster (Dme) 7302665
(FBgn0003031)
GI:17136378
Homo sapiens (Hsa) Hs13569958 GI:13569958
Homo sapiens (Hsa) Hs13644124 GI:13644124
Homo sapiens (Hsa) Hs17435151 GI:17435151
Homo sapiens (Hsa) Hs17449010 GI:17449010
Homo sapiens (Hsa) Hs18201888
(PABPC5)
GI:18201888 Q96DU9
Homo sapiens (Hsa) Hs18600888_2 GI:18600888
Homo sapiens (Hsa) Hs20472792 GI:20472792
Homo sapiens (Hsa) Hs20472797 GI:20472797
Homo sapiens (Hsa) Hs20475270 GI:20475270
Homo sapiens (Hsa) Hs20535199 GI:20535199
Homo sapiens (Hsa) Hs20559158 GI:20559158
Homo sapiens (Hsa) Hs22055266 GI:22055266
Homo sapiens (Hsa) Hs22058383 GI:22058383
Homo sapiens (Hsa) Hs22058480 GI:22058480
Homo sapiens (Hsa) Hs22067809 GI:22067809
Homo sapiens (Hsa) Hs4504715
(PABPC4)
GI:4504715 Q15164
Homo sapiens (Hsa) Hs4505575 GI:4505575
Homo sapiens (Hsa) Hs4885511 GI:4885511
Saccharomyces cerevisiae (Sce) YER165w
(S000000967)
GI:6321013 P04147
Saccharomyces cerevisiae (Sce) YFR023w
(S000001919)
GI:14318545 P39684
Saccharomyces cerevisiae (Sce) YHR015w
(S000001057)
GI:6321803 P38760
Schizosaccharomyces pombe (Spo) SPAC57A7.04c GI:19114289 P31209
Encephalitozoon cuniculi (Ecu) ECU02g0250 GI:19073946 Q8SWG0
Encephalitozoon cuniculi (Ecu) ECU07g0340 GI:19074456 Q8SRL7
Encephalitozoon cuniculi (Ecu) ECU09g1470 GI:19173268
Encephalitozoon cuniculi (Ecu) ECU10g1110 GI:19074720 Q8SR30
Arabidopsis thaliana (Ath) At1g22760 GI:15219945
Arabidopsis thaliana (Ath) At1g45100 GI:15219528
Arabidopsis thaliana (Ath) At1g49760 GI:15222813
Arabidopsis thaliana (Ath) At1g71770 GI:15217573
Arabidopsis thaliana (Ath) At2g15500 GI:15226539
Arabidopsis thaliana (Ath) At2g23350 GI:15227815
Arabidopsis thaliana (Ath) At2g36660 GI:15228016
Arabidopsis thaliana (Ath) At3g16380 GI:15228191
Arabidopsis thaliana (Ath) At3g19330_1 GI:15230350
Arabidopsis thaliana (Ath) At3g19350 GI:15230352
Arabidopsis thaliana (Ath) At3g48830_2 GI:15229038
Arabidopsis thaliana (Ath) At3g48840 GI:15229039
Arabidopsis thaliana (Ath) At4g34110 GI:15235241
Arabidopsis thaliana (Ath) At5g03580 GI:15242807
Arabidopsis thaliana (Ath) At5g41690 GI:10178023
Caenorhabditis elegans (Cel) CE02193
(WBGene00003903)
GI:17567133 Q19579
Caenorhabditis elegans (Cel) CE03230 GI:17567131 Q19579
Caenorhabditis elegans (Cel) CE20412
(WBGene00003902)
GI:17510879
Drosophila melanogaster (Dme) 7302665
(FBgn0003031)
GI:17136378
Homo sapiens (Hsa) Hs13569958 GI:13569958
Homo sapiens (Hsa) Hs13644124 GI:13644124
Homo sapiens (Hsa) Hs17435151 GI:17435151
Homo sapiens (Hsa) Hs17449010 GI:17449010
Homo sapiens (Hsa) Hs18201888
(PABPC5)
GI:18201888 Q96DU9
Homo sapiens (Hsa) Hs18600888_2 GI:18600888
Homo sapiens (Hsa) Hs20472792 GI:20472792
Homo sapiens (Hsa) Hs20472797 GI:20472797
Homo sapiens (Hsa) Hs20475270 GI:20475270
Homo sapiens (Hsa) Hs20535199 GI:20535199
Homo sapiens (Hsa) Hs20559158 GI:20559158
Homo sapiens (Hsa) Hs22055266 GI:22055266
Homo sapiens (Hsa) Hs22058383 GI:22058383
Homo sapiens (Hsa) Hs22058480 GI:22058480
Homo sapiens (Hsa) Hs22067809 GI:22067809
Homo sapiens (Hsa) Hs4504715
(PABPC4)
GI:4504715 Q15164
Homo sapiens (Hsa) Hs4505575 GI:4505575
Homo sapiens (Hsa) Hs4885511 GI:4885511
Saccharomyces cerevisiae (Sce) YER165w
(S000000967)
GI:6321013 P04147
Saccharomyces cerevisiae (Sce) YFR023w
(S000001919)
GI:14318545 P39684
Saccharomyces cerevisiae (Sce) YHR015w
(S000001057)
GI:6321803 P38760
Schizosaccharomyces pombe (Spo) SPAC57A7.04c GI:19114289 P31209
Encephalitozoon cuniculi (Ecu) ECU02g0250 GI:19073946 Q8SWG0
Encephalitozoon cuniculi (Ecu) ECU07g0340 GI:19074456 Q8SRL7
Encephalitozoon cuniculi (Ecu) ECU09g1470 GI:19173268
Encephalitozoon cuniculi (Ecu) ECU10g1110 GI:19074720 Q8SR30
Arabidopsis thaliana (Ath) At1g22760 GI:15219945
Arabidopsis thaliana (Ath) At1g45100 GI:15219528
Arabidopsis thaliana (Ath) At1g49760 GI:15222813
Arabidopsis thaliana (Ath) At1g71770 GI:15217573
Arabidopsis thaliana (Ath) At2g15500 GI:15226539
Arabidopsis thaliana (Ath) At2g23350 GI:15227815
Arabidopsis thaliana (Ath) At2g36660 GI:15228016
Arabidopsis thaliana (Ath) At3g16380 GI:15228191
Arabidopsis thaliana (Ath) At3g19330_1 GI:15230350
Arabidopsis thaliana (Ath) At3g19350 GI:15230352
Arabidopsis thaliana (Ath) At3g48830_2 GI:15229038
Arabidopsis thaliana (Ath) At3g48840 GI:15229039
Arabidopsis thaliana (Ath) At4g34110 GI:15235241
Arabidopsis thaliana (Ath) At5g03580 GI:15242807
Arabidopsis thaliana (Ath) At5g41690 GI:10178023
Caenorhabditis elegans (Cel) CE02193
(WBGene00003903)
GI:17567133 Q19579
Caenorhabditis elegans (Cel) CE03230 GI:17567131 Q19579
Caenorhabditis elegans (Cel) CE20412
(WBGene00003902)
GI:17510879
Drosophila melanogaster (Dme) 7302665
(FBgn0003031)
GI:17136378
Homo sapiens (Hsa) Hs13569958 GI:13569958
Homo sapiens (Hsa) Hs13644124 GI:13644124
Homo sapiens (Hsa) Hs17435151 GI:17435151
Homo sapiens (Hsa) Hs17449010 GI:17449010
Homo sapiens (Hsa) Hs18201888
(PABPC5)
GI:18201888 Q96DU9
Homo sapiens (Hsa) Hs18600888_2 GI:18600888
Homo sapiens (Hsa) Hs20472792 GI:20472792
Homo sapiens (Hsa) Hs20472797 GI:20472797
Homo sapiens (Hsa) Hs20475270 GI:20475270
Homo sapiens (Hsa) Hs20535199 GI:20535199
Homo sapiens (Hsa) Hs20559158 GI:20559158
Homo sapiens (Hsa) Hs22055266 GI:22055266
Homo sapiens (Hsa) Hs22058383 GI:22058383
Homo sapiens (Hsa) Hs22058480 GI:22058480
Homo sapiens (Hsa) Hs22067809 GI:22067809
Homo sapiens (Hsa) Hs4504715
(PABPC4)
GI:4504715 Q15164
Homo sapiens (Hsa) Hs4505575 GI:4505575
Homo sapiens (Hsa) Hs4885511 GI:4885511
Saccharomyces cerevisiae (Sce) YER165w
(S000000967)
GI:6321013 P04147
Saccharomyces cerevisiae (Sce) YFR023w
(S000001919)
GI:14318545 P39684
Saccharomyces cerevisiae (Sce) YHR015w
(S000001057)
GI:6321803 P38760
Schizosaccharomyces pombe (Spo) SPAC57A7.04c GI:19114289 P31209
Encephalitozoon cuniculi (Ecu) ECU02g0250 GI:19073946 Q8SWG0
Encephalitozoon cuniculi (Ecu) ECU07g0340 GI:19074456 Q8SRL7
Encephalitozoon cuniculi (Ecu) ECU09g1470 GI:19173268
Encephalitozoon cuniculi (Ecu) ECU10g1110 GI:19074720 Q8SR30


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000932 cytoplasmic mRNA processing body C
IDA
CelWBGene00003902
GO:0005575 cellular_component C
ND
AthAt3g48840
At3g19350
At5g03580
At2g15500
SceS000001919
GO:0005634 nucleus C
IDA
AthAt1g71770
SceS000000967
SpoSPAC57A7.04c
GO:0005643 nuclear pore C
IPI
SceS000001057
GO:0005737 cytoplasm C
IDA
HsaPABPC4
SceS000000967
SpoSPAC57A7.04c
GO:0005829 cytosol C
IDA
AthAt1g71770
SpoSPAC57A7.04c
GO:0005840 ribosome C
IDA
SceS000000967
GO:0005886 plasma membrane C
IDA
AthAt3g19330
GO:0010494 stress granule C
IDA
SceS000000967
GO:0030529 ribonucleoprotein complex C
IDA
HsaPABPC4
GO:0043186 P granule C
IDA
CelWBGene00003902
GO:0003674 molecular_function F
ND
AthAt2g15500
At3g19330
SceS000001919
GO:0003676 nucleic acid binding F
ISS
AthAt3g48840
At5g03580
GO:0003723 RNA binding F
ISS
AthAt1g49760
At3g16380
At4g34110
At3g48830
At2g23350
At5g03580
At1g45100
At1g22760
At1g71770
At2g36660
At5g41690
SceS000001057
GO:0003729 mRNA binding F
IDA
CelWBGene00003902
GO:0003743 translation initiation factor activity F
ISS
AthAt3g16380
At2g36660
At4g34110
At1g22760
At1g71770
At1g49760
At2g23350
GO:0004652 polynucleotide adenylyltransferase
activity
F
ISS
AthAt3g48830
GO:0005515 protein binding F
IPI
HsaPABPC4
GO:0008143 poly(A) RNA binding F
IDA
AthAt1g71770
HsaPABPC4
SceS000000967
IMP
SceS000000967
ISS
AthAt3g19350
TAS
SpoSPAC57A7.04c
GO:0008266 poly(U) RNA binding F
IDA
HsaPABPC4
GO:0000003 reproduction P
IMP
CelWBGene00003902
GO:0000289 nuclear-transcribed mRNA poly(A) tail
shortening
P
IGI
AthAt1g71770
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00003902
GO:0006396 RNA processing P
ISS
AthAt3g48830
TAS
HsaPABPC4
GO:0006397 mRNA processing P
IGI
AthAt1g22760
GO:0006401 RNA catabolic process P
TAS
HsaPABPC4
GO:0006406 mRNA export from nucleus P
IMP
SpoSPAC57A7.04c
IPI
SceS000001057
GO:0006412 translation P
TAS
HsaPABPC4
GO:0006413 translational initiation P
IGI
AthAt1g71770
ISS
AthAt4g34110
TAS
AthAt3g16380
GO:0006415 translational termination P
RCA
SceS000001057
GO:0006417 regulation of translation P
RCA
SceS000000967
TAS
AthAt3g19350
GO:0006446 regulation of translational initiation P
IDA
SceS000000967
IMP
SceS000000967
ISS
SpoSPAC57A7.04c
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00003902
GO:0007276 gamete generation P
IMP
CelWBGene00003902
GO:0007596 blood coagulation P
TAS
HsaPABPC4
GO:0008150 biological_process P
ND
AthAt3g48840
At2g15500
At3g19330
At5g03580
SceS000001919
GO:0009651 response to salt stress P
IEP
AthAt4g34110
GO:0009792 embryo development ending in birth or egg
hatching
P
IMP
CelWBGene00003903
WBGene00003902
GO:0010171 body morphogenesis P
IMP
CelWBGene00003902
GO:0016071 mRNA metabolic process P
TAS
AthAt3g16380
GO:0030435 sporulation resulting in formation of a cellular
spore
P
RCA
SceS000001919
GO:0040007 growth P
IMP
CelWBGene00003902
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00003902
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00003902
GO:0046686 response to cadmium ion P
IEP
AthAt1g49760
At2g23350
GO:0060211 regulation of nuclear-transcribed mRNA poly(A)
tail shortening
P
IDA
SceS000000967
IMP
SceS000000967

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
28416

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) PES4
(S000001919)
GI:14318545 P39684
Kluyveromyces lactis (Kla) KLLA0A08338g GI:50302861
Eremothecium gossypii (Ego) AGOS_AEL016C GI:45190591


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000001919
GO:0003674 molecular_function F
ND
SceS000001919
GO:0008150 biological_process P
ND
SceS000001919
GO:0030435 sporulation resulting in formation of a cellular
spore
P
RCA
SceS000001919

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_31618

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago2490 AEL016C
Candida glabrata (Cgl) cgl2906 CAGL0I08943g
Kluyveromyces lactis (Kla) kla365 KLLA0A08338g
Saccharomyces cerevisiae (Sce) sce2049 YFR023W
(S000001919)