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Search term: YFR024C-A

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name LSB3
SGD link S000002968
Alternative ID YFR024C-A
Description Protein containing a C-terminal SH3 domain; binds Las17p, which is a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization
Synonyms YFR024C-A
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1843 A--HYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g29800 GI:15220554
Arabidopsis thaliana (Ath) At3g43230 GI:15229244
Homo sapiens (Hsa) Hs7661670 GI:7661670
Saccharomyces cerevisiae (Sce) YFR024c GI:14318546
Saccharomyces cerevisiae (Sce) YFR024c-a
(S000002968)		 GI:15530184
Saccharomyces cerevisiae (Sce) YHR016c
(S000001058)		 GI:6321804 P32793
Schizosaccharomyces pombe (Spo) SPAPJ696.02 GI:19113960 Q9URW6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g43230
GO:0005737 cytoplasm C
IDA
SceS000002968
GO:0005739 mitochondrion C
IDA
SceS000002968
GO:0005935 cellular bud neck C
IDA
SceS000002968
GO:0015629 actin cytoskeleton C
RCA
SceS000002968
GO:0030479 actin cortical patch C
IDA
SceS000001058
ISS
SpoSPAPJ696.02
RCA
SceS000002968
GO:0030863 cortical cytoskeleton C
RCA
SceS000002968
GO:0030864 cortical actin cytoskeleton C
RCA
SceS000002968
GO:0003674 molecular_function F
ND
SceS000002968
SpoSPAPJ696.02
GO:0008270 zinc ion binding F
ISS
AthAt3g43230
At1g29800
GO:0035091 phosphoinositide binding F
ISS
AthAt3g43230
At1g29800
GO:0051015 actin filament binding F
IDA
SceS000001058
GO:0000003 reproduction P
RCA
SceS000002968
GO:0006897 endocytosis P
IGI
SceS000001058
ISS
SpoSPAPJ696.02
GO:0007015 actin filament organization P
IPI
SceS000001058
GO:0007047 cellular cell wall organization P
RCA
SceS000002968
GO:0007165 signal transduction P
ISS
AthAt3g43230
At1g29800
GO:0009966 regulation of signal transduction P
RCA
SceS000002968
GO:0010687 site selection involved in cell cycle
cytokinesis		 P
ISS
SpoSPAPJ696.02
GO:0030036 actin cytoskeleton organization P
IGI
SceS000001058
NAS
SpoSPAPJ696.02
GO:0051017 actin filament bundle assembly P
IDA
SceS000001058
GO:0051049 regulation of transport P
RCA
SceS000001058
S000002968
GO:0051181 cofactor transport P
RCA
SceS000002968
GO:0051301 cell division P
RCA
SceS000002968
GO:0051666 actin cortical patch localization P
IGI
SceS000001058
S000002968
IMP
SceS000001058
S000002968

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
31662

Species Gene ID NCBI link UniProt link
Canis familiaris (Cfa) LOC606804 GI:73979679
Mus musculus (Mmu) Sh3yl1
(MGI:1346118)		 GI:7305487 O08641
Rattus norvegicus (Rno) Sh3yl1 GI:109478109
Gallus gallus (Gga) SH3YL1 GI:50744896
Schizosaccharomyces pombe (Spo) SPAPJ696.02 GI:19113960 Q9URW6
Saccharomyces cerevisiae (Sce) YSC84
(S000001058)		 GI:6321804 P32793
Saccharomyces cerevisiae (Sce) LSB3
(S000002968)		 GI:15530184
Kluyveromyces lactis (Kla) KLLA0A08360g GI:50302863
Eremothecium gossypii (Ego) AGOS_AEL017W GI:45190590
Magnaporthe grisea (Mgr) MGG_02506 GI:145606152
Neurospora crassa (Ncr) NCU03888.1 GI:32405188


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1346118
GO:0005737 cytoplasm C
IDA
SceS000002968
GO:0005739 mitochondrion C
IDA
SceS000002968
GO:0005935 cellular bud neck C
IDA
SceS000002968
GO:0015629 actin cytoskeleton C
RCA
SceS000002968
GO:0030479 actin cortical patch C
IDA
SceS000001058
ISS
SpoSPAPJ696.02
RCA
SceS000002968
GO:0030863 cortical cytoskeleton C
RCA
SceS000002968
GO:0030864 cortical actin cytoskeleton C
RCA
SceS000002968
GO:0003674 molecular_function F
ND
SceS000002968
SpoSPAPJ696.02
GO:0005515 protein binding F
IPI
MmuMGI:1346118
GO:0051015 actin filament binding F
IDA
SceS000001058
GO:0000003 reproduction P
RCA
SceS000002968
GO:0006897 endocytosis P
IGI
SceS000001058
ISS
SpoSPAPJ696.02
GO:0007015 actin filament organization P
IPI
SceS000001058
GO:0007047 cellular cell wall organization P
RCA
SceS000002968
GO:0008150 biological_process P
ND
MmuMGI:1346118
GO:0009966 regulation of signal transduction P
RCA
SceS000002968
GO:0010687 site selection involved in cell cycle
cytokinesis		 P
ISS
SpoSPAPJ696.02
GO:0030036 actin cytoskeleton organization P
IGI
SceS000001058
NAS
SpoSPAPJ696.02
GO:0051017 actin filament bundle assembly P
IDA
SceS000001058
GO:0051049 regulation of transport P
RCA
SceS000001058
S000002968
GO:0051181 cofactor transport P
RCA
SceS000002968
GO:0051301 cell division P
RCA
SceS000002968
GO:0051666 actin cortical patch localization P
IGI
SceS000001058
S000002968
IMP
SceS000001058
S000002968

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3208

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago2489 AEL017W
Arabidopsis thaliana (Ath) ath15595 At3g43230.1
Candida glabrata (Cgl) cgl2907 CAGL0I08965g
Cryptococcus neoformans (Cne) cne1117 180.m00042
Cryptococcus neoformans (Cne) cne2753 183.m01692
Debaryomyces hansenii (Dha) dha2142 DEHA0C16093g
Danio rerio (Dre) dre8338 ENSDARP00000045523
Takifugu rubripes (Fru) fru29176 SINFRUP00000142255
Takifugu rubripes (Fru) fru29177 SINFRUP00000171648
Gallus gallus (Gga) gga15913 ENSGALP00000026343
Gallus gallus (Gga) gga15914 ENSGALP00000026344
(SH3YL1)
Homo sapiens (Hsa) hsa17390 ENSP00000308903
(SH3YL1)		 Q96HL8-1
Homo sapiens (Hsa) hsa17389 ENSP00000311922
Kluyveromyces lactis (Kla) kla366 KLLA0A08360g
Mus musculus (Mmu) mmu5586 ENSMUSP00000020997
(MGI:1346118)		 O08641-1
Neurospora crassa (Ncr) ncr3777 NCU03888.2
Oryza sativa (Osa) osa51529 5979.m00121
Oryza sativa (Osa) osa58212 6256.m00153
Oryza sativa (Osa) osa77544 7322.m00096
Rattus norvegicus (Rno) rno24975 ENSRNOP00000007330
(RGD:1306440)
Saccharomyces cerevisiae (Sce) sce2050 YFR024C-A
(S000002968)
Saccharomyces cerevisiae (Sce) sce2762 YHR016C
(S000001058)
Schizosaccharomyces pombe (Spo) spo500 SPAPJ696.02 Q9URW6
Yarrowia lipolytica (Yli) yli4097 YALI0E05621g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g43230
MmuMGI:1346118
GO:0005737 cytoplasm C
IDA
SceS000002968
GO:0005739 mitochondrion C
IDA
SceS000002968
GO:0005935 cellular bud neck C
IDA
SceS000002968
GO:0015629 actin cytoskeleton C
RCA
SceS000002968
GO:0030479 actin cortical patch C
IDA
SceS000001058
ISS
SpoSPAPJ696.02
RCA
SceS000002968
GO:0030863 cortical cytoskeleton C
RCA
SceS000002968
GO:0030864 cortical actin cytoskeleton C
RCA
SceS000002968
GO:0003674 molecular_function F
ND
SceS000002968
SpoSPAPJ696.02
GO:0005515 protein binding F
IPI
MmuMGI:1346118
GO:0008270 zinc ion binding F
ISS
AthAt3g43230
GO:0035091 phosphoinositide binding F
ISS
AthAt3g43230
GO:0051015 actin filament binding F
IDA
SceS000001058
GO:0000003 reproduction P
RCA
SceS000002968
GO:0006897 endocytosis P
IGI
SceS000001058
ISS
SpoSPAPJ696.02
GO:0007015 actin filament organization P
IPI
SceS000001058
GO:0007047 cellular cell wall organization P
RCA
SceS000002968
GO:0007165 signal transduction P
ISS
AthAt3g43230
GO:0008150 biological_process P
ND
MmuMGI:1346118
GO:0009966 regulation of signal transduction P
RCA
SceS000002968
GO:0010687 site selection involved in cell cycle
cytokinesis		 P
ISS
SpoSPAPJ696.02
GO:0030036 actin cytoskeleton organization P
IGI
SceS000001058
NAS
SpoSPAPJ696.02
GO:0051017 actin filament bundle assembly P
IDA
SceS000001058
GO:0051049 regulation of transport P
RCA
SceS000001058
S000002968
GO:0051181 cofactor transport P
RCA
SceS000002968
GO:0051301 cell division P
RCA
SceS000002968
GO:0051666 actin cortical patch localization P
IGI
SceS000001058
S000002968
IMP
SceS000001058
S000002968

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAPJ696.02
(Q9URW6)		 YFR024C-A
(S000002968)