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Search term: YFR032C-A

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RPL29
SGD link S000006437
Alternative ID YFR032C-A
Description Protein component of the large (60S) ribosomal subunit, has similarity to rat L29 ribosomal protein; not essential for translation, but required for proper joining of the large and small ribosomal subunits and for normal translation rate
Synonyms YFR032C-A
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3504 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING 60S ribosomal protein L29

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g06680 GI:15230771
Arabidopsis thaliana (Ath) At3g06700 GI:15230773
Caenorhabditis elegans (Cel) CE15559
(WBGene00004443)		 GI:17542006 O45226
Caenorhabditis elegans (Cel) CE25306 GI:17510075
Caenorhabditis elegans (Cel) CE25981 GI:17542220
Drosophila melanogaster (Dme) 7291277
(FBgn0016726)		 GI:17137274 Q24154
Homo sapiens (Hsa) Hs17440756 GI:17440756
Homo sapiens (Hsa) Hs17446057 GI:17446057
Homo sapiens (Hsa) Hs17462910 GI:17462910
Homo sapiens (Hsa) Hs17463066 GI:17463066
Homo sapiens (Hsa) Hs17481754 GI:17481754
Homo sapiens (Hsa) Hs18569597 GI:18569597
Homo sapiens (Hsa) Hs18603474 GI:18603474
Homo sapiens (Hsa) Hs20536298 GI:20536298
Homo sapiens (Hsa) Hs20550589 GI:20550589
Homo sapiens (Hsa) Hs20555958 GI:20555958
Homo sapiens (Hsa) Hs22047059 GI:22047059
Homo sapiens (Hsa) Hs22056236_1 GI:22056236
Homo sapiens (Hsa) Hs22060941 GI:22060941
Homo sapiens (Hsa) Hs22062598_2 GI:22062598
Homo sapiens (Hsa) Hs4506629
(RPL29)		 GI:4506629 P47914
Saccharomyces cerevisiae (Sce) YFR032c-a
(S000006437)		 GI:14318557 P05747
Schizosaccharomyces pombe (Spo) SPBC776.01 GI:19113108 Q92366


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
AthAt3g06700
SpoSPBC776.01
GO:0005737 cytoplasm C
IDA
SceS000006437
GO:0005829 cytosol C
EXP
HsaRPL29
IDA
SpoSPBC776.01
GO:0005840 ribosome C
ISS
AthAt3g06680
At3g06700
NAS
DmeFBgn0016726
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g06680
At3g06700
SceS000006437
ISS
DmeFBgn0016726
SpoSPBC776.01
NAS
DmeFBgn0016726
TAS
HsaRPL29
GO:0003682 chromatin binding F
IGI
DmeFBgn0016726
GO:0003723 RNA binding F
TAS
HsaRPL29
GO:0003735 structural constituent of ribosome F
IDA
SceS000006437
ISS
AthAt3g06700
At3g06680
DmeFBgn0016726
SpoSPBC776.01
NAS
DmeFBgn0016726
GO:0005515 protein binding F
IPI
HsaRPL29
GO:0000003 reproduction P
IMP
CelWBGene00004443
GO:0006412 translation P
IDA
SceS000006437
ISS
AthAt3g06700
At3g06680
DmeFBgn0016726
SpoSPBC776.01
NAS
DmeFBgn0016726
TAS
HsaRPL29
GO:0006414 translational elongation P
EXP
HsaRPL29
GO:0007566 embryo implantation P
TAS
HsaRPL29
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004443
GO:0042254 ribosome biogenesis P
ISS
AthAt3g06700
At3g06680

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
41938

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) RPL29
(S000006437)		 GI:14318557 P05747
Kluyveromyces lactis (Kla) KLLA0D16071g GI:50307577
Eremothecium gossypii (Ego) AGOS_ADL125C GI:45187748
Magnaporthe grisea (Mgr) MGG_06333 GI:39976861
Neurospora crassa (Ncr) NCU00315.1 GI:32403576


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SceS000006437
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000006437
GO:0003735 structural constituent of ribosome F
IDA
SceS000006437
GO:0006412 translation P
IDA
SceS000006437

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_673

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga2058 ENSANGP00000011508
Ashbya gossypii (Ago) ago1616 ADL125C
Arabidopsis thaliana (Ath) ath12748 At3g06680.1
Arabidopsis thaliana (Ath) ath12750 At3g06700.1
Caenorhabditis elegans (Cel) cel588 B0513.3
(CE15559;
WBGene00004443)
Candida glabrata (Cgl) cgl881 CAGL0D05214g
Cryptococcus neoformans (Cne) cne4440 177.m03192
Dictyostelium discoideum (Ddi) ddi12256 DDB0230154
Debaryomyces hansenii (Dha) dha1351 DEHA0B15345g
Drosophila melanogaster (Dme) dme6320 CG10071-PA
(FBgn0016726)
Drosophila melanogaster (Dme) dme6321 CG10071-PB
(FBgn0016726)
Drosophila melanogaster (Dme) dme6322 CG10071-PC
(FBgn0016726)
Takifugu rubripes (Fru) fru26436 SINFRUP00000168707
Gallus gallus (Gga) gga4918 ENSGALP00000002207
Homo sapiens (Hsa) hsa25207 ENSP00000254689
Homo sapiens (Hsa) hsa25042 ENSP00000284293
Homo sapiens (Hsa) hsa10851 ENSP00000287144
Homo sapiens (Hsa) hsa22586 ENSP00000294189
(RPL29)		 P47914
Homo sapiens (Hsa) hsa16139 ENSP00000309480
Kluyveromyces lactis (Kla) kla2767 KLLA0D16071g
Mus musculus (Mmu) mmu25773 ENSMUSP00000072708
Mus musculus (Mmu) mmu1611 ENSMUSP00000072889
Mus musculus (Mmu) mmu267 ENSMUSP00000073290
Mus musculus (Mmu) mmu7005 ENSMUSP00000074107
Mus musculus (Mmu) mmu11828 ENSMUSP00000074649
(GI:240110)
Mus musculus (Mmu) mmu6482 ENSMUSP00000075346
(GI:432721)
Mus musculus (Mmu) mmu12863 ENSMUSP00000076108
Mus musculus (Mmu) mmu12489 ENSMUSP00000076975
Mus musculus (Mmu) mmu12436 ENSMUSP00000078719
Mus musculus (Mmu) mmu20777 ENSMUSP00000078822
Mus musculus (Mmu) mmu19398 ENSMUSP00000079490
Mus musculus (Mmu) mmu18164 ENSMUSP00000079745
Mus musculus (Mmu) mmu10287 ENSMUSP00000079918
Mus musculus (Mmu) mmu28213 ENSMUSP00000080203
(MGI:99687)		 P47915
Mus musculus (Mmu) mmu19058 ENSMUSP00000080554
Mus musculus (Mmu) mmu26986 ENSMUSP00000080867
Neurospora crassa (Ncr) ncr301 NCU00315.2
Oryza sativa (Osa) osa8860 2686.m00137
Oryza sativa (Osa) osa35432 4730.m00161
Rattus norvegicus (Rno) rno29214 ENSRNOP00000014849
(RGD:62069)		 P25886
Rattus norvegicus (Rno) rno12475 ENSRNOP00000030710
Rattus norvegicus (Rno) rno21717 ENSRNOP00000035245
Rattus norvegicus (Rno) rno25041 ENSRNOP00000040943
Rattus norvegicus (Rno) rno20807 ENSRNOP00000045026
Rattus norvegicus (Rno) rno22814 ENSRNOP00000047807
Rattus norvegicus (Rno) rno31852 ENSRNOP00000047999
Rattus norvegicus (Rno) rno9219 ENSRNOP00000048847
Saccharomyces cerevisiae (Sce) sce2060 YFR032C-A
(S000006437)
Schizosaccharomyces pombe (Spo) spo1900 SPBC776.01 Q92366
Yarrowia lipolytica (Yli) yli5697 YALI0F08437g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000300 peripheral to membrane of membrane
fraction		 C
IDA
MmuMGI:99687
GO:0005730 nucleolus C
IDA
AthAt3g06700
SpoSPBC776.01
GO:0005737 cytoplasm C
IDA
SceS000006437
GO:0005829 cytosol C
IDA
SpoSPBC776.01
GO:0005840 ribosome C
ISS
AthAt3g06680
At3g06700
NAS
DmeFBgn0016726
GO:0022625 cytosolic large ribosomal subunit C
IDA
AthAt3g06680
At3g06700
SceS000006437
ISS
DmeFBgn0016726
SpoSPBC776.01
NAS
DmeFBgn0016726
GO:0022626 cytosolic ribosome C
IDA
MmuMGI:99687
GO:0042788 polysomal ribosome C
IDA
MmuMGI:99687
GO:0003682 chromatin binding F
IGI
DmeFBgn0016726
GO:0003735 structural constituent of ribosome F
IDA
SceS000006437
ISS
AthAt3g06700
At3g06680
DmeFBgn0016726
SpoSPBC776.01
NAS
DmeFBgn0016726
GO:0008201 heparin binding F
IDA
MmuMGI:99687
GO:0000003 reproduction P
IMP
CelWBGene00004443
GO:0006412 translation P
IDA
SceS000006437
IMP
MmuMGI:99687
ISS
AthAt3g06700
At3g06680
DmeFBgn0016726
SpoSPBC776.01
NAS
DmeFBgn0016726
GO:0008283 cell proliferation P
IMP
MmuMGI:99687
GO:0031589 cell-substrate adhesion P
IDA
MmuMGI:99687
GO:0035264 multicellular organism growth P
IMP
MmuMGI:99687
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00004443
GO:0042254 ribosome biogenesis P
ISS
AthAt3g06700
At3g06680

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC776.01
(Q92366)		 YFR032C-A
(S000006437)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005730 nucleolus C
IDA
SpoSPBC776.01
GO:0005737 cytoplasm C
IDA
SceS000006437
GO:0005829 cytosol C
IDA
SpoSPBC776.01
GO:0022625 cytosolic large ribosomal subunit C
IDA
SceS000006437
ISS
SpoSPBC776.01
GO:0003735 structural constituent of ribosome F
IDA
SceS000006437
ISS
SpoSPBC776.01
GO:0006412 translation P
IDA
SceS000006437
ISS
SpoSPBC776.01

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GO info in one table:

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