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Search term: YFR050C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name PRE4
SGD link S000001946
Alternative ID YFR050C
Description Beta 7 subunit of the 20S proteasome
Synonyms YFR050C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0185 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING 20S proteasome, regulatory subunit beta type PSMB4/PRE4

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g56450 GI:15223537
Caenorhabditis elegans (Cel) CE20761
(WBGene00003953)		 GI:17508501 P90868
Drosophila melanogaster (Dme) 7296763 GI:17380269
Homo sapiens (Hsa) Hs4506199 GI:4506199
Saccharomyces cerevisiae (Sce) YFR050c
(S000001946)		 GI:14318575 P30657
Schizosaccharomyces pombe (Spo) SPBC577.10 GI:19112100 Q9USQ9
Encephalitozoon cuniculi (Ecu) ECU05g0290 GI:19173566 Q8SS01
Arabidopsis thaliana (Ath) At1g56450 GI:15223537
Caenorhabditis elegans (Cel) CE20761
(WBGene00003953)		 GI:17508501 P90868
Drosophila melanogaster (Dme) 7296763 GI:17380269
Homo sapiens (Hsa) Hs4506199 GI:4506199
Saccharomyces cerevisiae (Sce) YFR050c
(S000001946)		 GI:14318575 P30657
Schizosaccharomyces pombe (Spo) SPBC577.10 GI:19112100 Q9USQ9
Encephalitozoon cuniculi (Ecu) ECU05g0290 GI:19173566 Q8SS01
Arabidopsis thaliana (Ath) At1g56450 GI:15223537
Caenorhabditis elegans (Cel) CE20761
(WBGene00003953)		 GI:17508501 P90868
Drosophila melanogaster (Dme) 7296763 GI:17380269
Homo sapiens (Hsa) Hs4506199 GI:4506199
Saccharomyces cerevisiae (Sce) YFR050c
(S000001946)		 GI:14318575 P30657
Schizosaccharomyces pombe (Spo) SPBC577.10 GI:19112100 Q9USQ9
Encephalitozoon cuniculi (Ecu) ECU05g0290 GI:19173566 Q8SS01


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SceS000001946
IDA
SpoSPBC577.10
GO:0005789 endoplasmic reticulum membrane C
IC
SceS000001946
GO:0005829 cytosol C
IDA
SpoSPBC577.10
GO:0005839 proteasome core complex C
TAS
AthAt1g56450
GO:0019774 proteasome core complex, beta-subunit
complex		 C
IDA
SceS000001946
ISS
SpoSPBC577.10
GO:0022626 cytosolic ribosome C
IDA
AthAt1g56450
GO:0034515 proteasome storage granule C
IDA
SceS000001946
GO:0003674 molecular_function F
ND
SceS000001946
GO:0004175 endopeptidase activity F
ISS
SpoSPBC577.10
GO:0008233 peptidase activity F
ISS
AthAt1g56450
GO:0000003 reproduction P
IMP
CelWBGene00003953
GO:0000278 mitotic cell cycle P
IC
SpoSPBC577.10
GO:0002119 nematode larval development P
IMP
CelWBGene00003953
GO:0006508 proteolysis P
RCA
SceS000001946
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
TAS
AthAt1g56450
GO:0007346 regulation of mitotic cell cycle P
NAS
SpoSPBC577.10
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00003953
GO:0009651 response to salt stress P
IEP
AthAt1g56450
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003953
GO:0010499 proteasomal ubiquitin-independent protein
catabolic process		 P
IDA
SceS000001946
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000001946
GO:0040007 growth P
IMP
CelWBGene00003953
GO:0040011 locomotion P
IMP
CelWBGene00003953
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process		 P
IDA
SceS000001946
ISS
SpoSPBC577.10
GO:0043248 proteasome assembly P
IGI
SceS000001946
GO:0046686 response to cadmium ion P
IEP
AthAt1g56450

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
2090

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) PSMB4 GI:22538467
Pan troglodytes (Ptr) PSMB4 GI:55588170
Canis familiaris (Cfa) PSMB4 GI:73981584
Mus musculus (Mmu) Psmb4
(MGI:1098257)		 GI:45592932 P99026
Rattus norvegicus (Rno) Psmb4
(RGD:61877)		 GI:13928866
Gallus gallus (Gga) PSMB4 GI:118102245
Drosophila melanogaster (Dme) Prosbeta4 GI:24644203
Anopheles gambiae (Aga) AgaP_AGAP012608 GI:118776894
Anopheles gambiae (Aga) AgaP_AGAP011444 GI:158297668
Schizosaccharomyces pombe (Spo) SPBC577.10 GI:19112100 Q9USQ9
Saccharomyces cerevisiae (Sce) PRE4
(S000001946)		 GI:14318575 P30657
Kluyveromyces lactis (Kla) KLLA0D11506g GI:50307191
Eremothecium gossypii (Ego) AGOS_AFR258W GI:45198776
Magnaporthe grisea (Mgr) MGG_00331 GI:145611508
Neurospora crassa (Ncr) NCU07365.1 GI:32414343
Arabidopsis thaliana (Ath) PBG1 GI:15223537
Oryza sativa (Osa) Os09g0515200 GI:115480143
Plasmodium falciparum (Pfa) MAL8P1.142 GI:124512686


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000502 proteasome complex C
TAS
HsaPSMB4
GO:0005634 nucleus C
IC
SceS000001946
IDA
SpoSPBC577.10
TAS
HsaPSMB4
GO:0005737 cytoplasm C
IDA
HsaPSMB4
GO:0005789 endoplasmic reticulum membrane C
IC
SceS000001946
GO:0005813 centrosome C
IDA
HsaPSMB4
GO:0005829 cytosol C
IDA
SpoSPBC577.10
GO:0005839 proteasome core complex C
TAS
AthPBG1
GO:0019774 proteasome core complex, beta-subunit
complex		 C
IDA
SceS000001946
ISS
SpoSPBC577.10
GO:0022626 cytosolic ribosome C
IDA
AthPBG1
GO:0034515 proteasome storage granule C
IDA
SceS000001946
GO:0045111 intermediate filament cytoskeleton C
IDA
HsaPSMB4
GO:0001530 lipopolysaccharide binding F
IDA
MmuMGI:1098257
GO:0003674 molecular_function F
ND
SceS000001946
GO:0004175 endopeptidase activity F
ISS
SpoSPBC577.10
GO:0008233 peptidase activity F
ISS
AthPBG1
GO:0000278 mitotic cell cycle P
IC
SpoSPBC577.10
GO:0002862 negative regulation of inflammatory response to
antigenic stimulus		 P
IMP
MmuMGI:1098257
GO:0006508 proteolysis P
RCA
SceS000001946
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
TAS
AthPBG1
GO:0007346 regulation of mitotic cell cycle P
NAS
SpoSPBC577.10
GO:0009651 response to salt stress P
IEP
AthPBG1
GO:0010499 proteasomal ubiquitin-independent protein
catabolic process		 P
IDA
SceS000001946
GO:0030435 sporulation resulting in formation of a cellular
spore		 P
RCA
SceS000001946
GO:0031145 anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic
process		 P
EXP
HsaPSMB4
GO:0043161 proteasomal ubiquitin-dependent protein catabolic
process		 P
IDA
SceS000001946
ISS
SpoSPBC577.10
GO:0043248 proteasome assembly P
IGI
SceS000001946
GO:0046686 response to cadmium ion P
IEP
AthPBG1
GO:0051436 negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell
cycle		 P
EXP
HsaPSMB4
GO:0051437 positive regulation of ubiquitin-protein ligase
activity involved in mitotic cell
cycle		 P
EXP
HsaPSMB4

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1650

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga8538 ENSANGP00000014918
Anopheles gambiae (Aga) aga13636 ENSANGP00000016399
Ashbya gossypii (Ago) ago3450 AFR258W
Arabidopsis thaliana (Ath) ath4993 At1g56450.1
Arabidopsis thaliana (Ath) ath17368 At3g59490.1
Caenorhabditis elegans (Cel) cel8607 F39H11.5
(CE20761;
WBGene00003953)
Candida glabrata (Cgl) cgl200 CAGL0A04719g
Cryptococcus neoformans (Cne) cne3689 176.m02429
Dictyostelium discoideum (Ddi) ddi1211 DDB0168029
Dictyostelium discoideum (Ddi) ddi3018 DDB0217368
Debaryomyces hansenii (Dha) dha5074 DEHA0F15499g
Drosophila melanogaster (Dme) dme10994 CG12000-PA
(FBgn0037314)
Drosophila melanogaster (Dme) dme10995 CG12000-PB
(FBgn0037314)
Danio rerio (Dre) dre10686 ENSDARP00000013721
Encephalitozoon cuniculi (Ecu) ecu1128 19173566
Takifugu rubripes (Fru) fru11066 SINFRUP00000135976
Gallus gallus (Gga) gga25858 ENSGALP00000001325
Homo sapiens (Hsa) hsa2012 ENSP00000290541
(PSMB4)		 P28070
Kluyveromyces lactis (Kla) kla2573 KLLA0D11506g
Mus musculus (Mmu) mmu17116 ENSMUSP00000005923
(MGI:1098257)		 P99026
Neurospora crassa (Ncr) ncr7170 NCU07365.2
Oryza sativa (Osa) osa21458 3602.m00251
Oryza sativa (Osa) osa21676 3606.m00331
Oryza sativa (Osa) osa51184 5969.m00138
Plasmodium falciparum (Pfa) pfa1959 MAL8P1.142
Rattus norvegicus (Rno) rno16578 ENSRNOP00000028484
(RGD:61877)		 P34067
Saccharomyces cerevisiae (Sce) sce2081 YFR050C
(S000001946)
Schizosaccharomyces pombe (Spo) spo786 SPBC577.10 Q9USQ9
Yarrowia lipolytica (Yli) yli5215 YALI0E32505g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IC
SceS000001946
IDA
SpoSPBC577.10
GO:0005789 endoplasmic reticulum membrane C
IC
SceS000001946
GO:0005829 cytosol C
IDA
SpoSPBC577.10
GO:0005839 proteasome core complex C
TAS
AthAt1g56450
GO:0019774 proteasome core complex, beta-subunit
complex		 C
IDA
SceS000001946
ISS
SpoSPBC577.10
GO:0022626 cytosolic ribosome C
IDA
AthAt1g56450
GO:0034515 proteasome storage granule C
IDA
SceS000001946
GO:0001530 lipopolysaccharide binding F
IDA
MmuMGI:1098257
GO:0003674 molecular_function F
ND
AthAt3g59490
SceS000001946
GO:0004175 endopeptidase activity F
ISS
SpoSPBC577.10
GO:0008233 peptidase activity F
ISS
AthAt1g56450
GO:0000003 reproduction P
IMP
CelWBGene00003953
GO:0000278 mitotic cell cycle P
IC
SpoSPBC577.10
GO:0002119 nematode larval development P
IMP
CelWBGene00003953
GO:0002862 negative regulation of inflammatory response to
antigenic stimulus		 P
IMP
MmuMGI:1098257
GO:0006508 proteolysis P
RCA
SceS000001946
GO:0006511 ubiquitin-dependent protein catabolic
process		 P
TAS
AthAt1g56450
GO:0007346 regulation of mitotic cell cycle P
NAS
SpoSPBC577.10
GO:0008150 biological_process P
ND
AthAt3g59490
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00003953
GO:0009651 response to salt stress P
IEP
AthAt1g56450
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00003953
GO:0010499 p