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Search term: YFR051C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name RET2
SGD link S000001947
Alternative ID YFR051C
Description Delta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER
Synonyms YFR051C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2635 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Medium subunit of clathrin adaptor complex

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At5g05010 GI:10178040
Caenorhabditis elegans (Cel) CE01778
(WBGene00015734)		 GI:17552154 Q09236
Drosophila melanogaster (Dme) 7290211 GI:7290211
Homo sapiens (Hsa) Hs11863154
(ARCN1)		 GI:11863154 P48444
Saccharomyces cerevisiae (Sce) YFR051c
(S000001947)		 GI:14318576 P43621
Schizosaccharomyces pombe (Spo) SPCC285.08 GI:19075836 O74496
Encephalitozoon cuniculi (Ecu) ECU08g0340 GI:19173360 Q8SRE8


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC285.08
GO:0005829 cytosol C
EXP
HsaARCN1
IDA
SpoSPCC285.08
GO:0016020 membrane C
IDA
AthAt5g05010
GO:0030126 COPI vesicle coat C
IMP
SceS000001947
ISS
HsaARCN1
SceS000001947
SpoSPCC285.08
GO:0003674 molecular_function F
ND
SpoSPCC285.08
GO:0005515 protein binding F
IMP
SceS000001947
GO:0000003 reproduction P
IMP
CelWBGene00015734
GO:0002119 nematode larval development P
IMP
CelWBGene00015734
GO:0006886 intracellular protein transport P
IC
SpoSPCC285.08
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000001947
ISS
SpoSPCC285.08
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
EXP
HsaARCN1
IMP
SceS000001947
ISS
SpoSPCC285.08
GO:0016044 cellular membrane organization P
EXP
HsaARCN1
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00015734
GO:0048205 COPI coating of Golgi vesicle P
EXP
HsaARCN1
GO:0048313 Golgi inheritance P
IGI
SceS000001947
GO:0051645 Golgi localization P
IGI
SceS000001947

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
122248

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) ret2
(SPCC285.08)		 GI:19075836 O74496
Saccharomyces cerevisiae (Sce) RET2
(S000001947)		 GI:14318576 P43621
Kluyveromyces lactis (Kla) KLLA0D11396g GI:50307181
Eremothecium gossypii (Ego) AGOS_AFR274C GI:45198792
Magnaporthe grisea (Mgr) MGG_05676 GI:39941530
Neurospora crassa (Ncr) NCU00493.1 GI:32403932
Plasmodium falciparum (Pfa) PF11_0359 GI:124804529


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC285.08
GO:0005737 cytoplasm C
ISS
PfaPF11_0359
GO:0005829 cytosol C
IDA
SpoSPCC285.08
GO:0030126 COPI vesicle coat C
IMP
SceS000001947
ISS
SceS000001947
SpoSPCC285.08
GO:0003674 molecular_function F
ND
PfaPF11_0359
SpoSPCC285.08
GO:0005515 protein binding F
IMP
SceS000001947
GO:0006886 intracellular protein transport P
IC
SpoSPCC285.08
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000001947
ISS
SpoSPCC285.08
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
IMP
SceS000001947
ISS
PfaPF11_0359
SpoSPCC285.08
GO:0048313 Golgi inheritance P
IGI
SceS000001947
GO:0051645 Golgi localization P
IGI
SceS000001947

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1088

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga7685 ENSANGP00000018445
Ashbya gossypii (Ago) ago3466 AFR274C
Arabidopsis thaliana (Ath) ath22674 At5g05010.1
Caenorhabditis elegans (Cel) cel1877 C13B9.3
(CE01778;
WBGene00015734)
Candida glabrata (Cgl) cgl201 CAGL0A04741g
Cryptococcus neoformans (Cne) cne491 163.m06241
Dictyostelium discoideum (Ddi) ddi1172 DDB0189960
Debaryomyces hansenii (Dha) dha5076 DEHA0F15543g
Drosophila melanogaster (Dme) dme16115 CG14813-PA
(FBgn0028969)
Danio rerio (Dre) dre6178 ENSDARP00000003007
Danio rerio (Dre) dre19288 ENSDARP00000011311
(arcn1)		 Q7ZW27
Danio rerio (Dre) dre6177 ENSDARP00000015456
Danio rerio (Dre) dre19313 ENSDARP00000047901
(arcn1l)		 Q7ZU89
Encephalitozoon cuniculi (Ecu) ecu191 19173360
Takifugu rubripes (Fru) fru2844 SINFRUP00000128972
Gallus gallus (Gga) gga13287 ENSGALP00000012007
(ARCN1)		 Q5ZL57
Homo sapiens (Hsa) hsa6643 ENSP00000264028
(ARCN1)		 P48444
Homo sapiens (Hsa) hsa6644 ENSP00000352385
(ARCN1)		 B0YIW6
Kluyveromyces lactis (Kla) kla2568 KLLA0D11396g
Mus musculus (Mmu) mmu27502 ENSMUSP00000034607
(MGI:2387591)		 Q3TDU1
Neurospora crassa (Ncr) ncr479 NCU00493.2
Oryza sativa (Osa) osa34032 4659.m00161
Oryza sativa (Osa) osa34061 4659.m00213
Oryza sativa (Osa) osa34062 4659.m00214
Oryza sativa (Osa) osa34063 4659.m00215
Oryza sativa (Osa) osa60316 6412.m00123
Oryza sativa (Osa) osa63774 6630.m00174
Oryza sativa (Osa) osa63776 6630.m00175
Oryza sativa (Osa) osa72010 7211.m00125
Plasmodium falciparum (Pfa) pfa810 PF11_0359
Rattus norvegicus (Rno) rno28473 ENSRNOP00000018598
(RGD:1359110)		 Q66H80
Saccharomyces cerevisiae (Sce) sce2082 YFR051C
(S000001947)
Schizosaccharomyces pombe (Spo) spo619 SPCC285.08 O74496
Yarrowia lipolytica (Yli) yli5217 YALI0E32542g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:2387591
GO:0005634 nucleus C
IDA
SpoSPCC285.08
GO:0005737 cytoplasm C
ISS
PfaPF11_0359
GO:0005829 cytosol C
IDA
SpoSPCC285.08
GO:0016020 membrane C
IDA
AthAt5g05010
GO:0030126 COPI vesicle coat C
IMP
SceS000001947
ISS
DmeFBgn0028969
SceS000001947
SpoSPCC285.08
NAS
DmeFBgn0028969
GO:0003674 molecular_function F
ND
MmuMGI:2387591
PfaPF11_0359
SpoSPCC285.08
GO:0005515 protein binding F
IMP
SceS000001947
GO:0000003 reproduction P
IMP
CelWBGene00015734
GO:0002119 nematode larval development P
IMP
CelWBGene00015734
GO:0006886 intracellular protein transport P
IC
SpoSPCC285.08
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000001947
ISS
SpoSPCC285.08
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
IMP
SceS000001947
ISS
DmeFBgn0028969
PfaPF11_0359
SpoSPCC285.08
GO:0006911 phagocytosis, engulfment P
IMP
DmeFBgn0028969
GO:0007436 larval salivary gland morphogenesis P
IMP
DmeFBgn0028969
GO:0008150 biological_process P
ND
MmuMGI:2387591
GO:0009306 protein secretion P
IMP
DmeFBgn0028969
GO:0010883 regulation of lipid storage P
IDA
DmeFBgn0028969
GO:0018996 molting cycle, collagen and cuticulin-based
cuticle		 P
IMP
CelWBGene00015734
GO:0035158 regulation of tube diameter, open tracheal
system		 P
IMP
DmeFBgn0028969
GO:0048313 Golgi inheritance P
IGI
SceS000001947
GO:0051645 Golgi localization P
IGI
SceS000001947

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC285.08
(O74496)		 YFR051C
(S000001947)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC285.08
GO:0005829 cytosol C
IDA
SpoSPCC285.08
GO:0030126 COPI vesicle coat C
IMP
SceS000001947
ISS
SceS000001947
SpoSPCC285.08
GO:0003674 molecular_function F
ND
SpoSPCC285.08
GO:0005515 protein binding F
IMP
SceS000001947
GO:0006886 intracellular protein transport P
IC
SpoSPCC285.08
GO:0006888 ER to Golgi vesicle-mediated transport P
IMP
SceS000001947
ISS
SpoSPCC285.08
GO:0006890 retrograde vesicle-mediated transport, Golgi to
ER		 P
IMP
SceS000001947
ISS
SpoSPCC285.08
GO:0048313 Golgi inheritance P
IGI
SceS000001947
GO:0051645 Golgi localization P
IGI
SceS000001947

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GO info in one table:

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