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Search term: YGL009C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name LEU1
SGD link S000002977
Alternative ID YGL009C
Description Isopropylmalate isomerase, catalyzes the second step in the leucine biosynthesis pathway
Synonyms YGL009C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG0454 A---YP-

KOGs classification KOGs description
METABOLISM 3-isopropylmalate dehydratase (aconitase superfamily)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g43090 GI:15224221
Arabidopsis thaliana (Ath) At2g43100 GI:15224222
Arabidopsis thaliana (Ath) At3g58990 GI:15231608
Arabidopsis thaliana (Ath) At4g13430 GI:7450363
Saccharomyces cerevisiae (Sce) YGL009c
(S000002977)		 GI:6321429 P07264
Schizosaccharomyces pombe (Spo) SPAC9E9.03 GI:19115488 O14289
Arabidopsis thaliana (Ath) At2g43090 GI:15224221
Arabidopsis thaliana (Ath) At2g43100 GI:15224222
Arabidopsis thaliana (Ath) At3g58990 GI:15231608
Arabidopsis thaliana (Ath) At4g13430 GI:7450363
Saccharomyces cerevisiae (Sce) YGL009c
(S000002977)		 GI:6321429 P07264
Schizosaccharomyces pombe (Spo) SPAC9E9.03 GI:19115488 O14289
Arabidopsis thaliana (Ath) At2g43090 GI:15224221
Arabidopsis thaliana (Ath) At2g43100 GI:15224222
Arabidopsis thaliana (Ath) At3g58990 GI:15231608
Arabidopsis thaliana (Ath) At4g13430 GI:7450363
Saccharomyces cerevisiae (Sce) YGL009c
(S000002977)		 GI:6321429 P07264
Schizosaccharomyces pombe (Spo) SPAC9E9.03 GI:19115488 O14289


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
IDA
SceS000002977
GO:0005829 cytosol C
ISS
SpoSPAC9E9.03
GO:0009507 chloroplast C
IDA
AthAt4g13430
At2g43090
GO:0009536 plastid C
IDA
AthAt3g58990
At2g43100
GO:0009570 chloroplast stroma C
IDA
AthAt4g13430
At2g43090
GO:0003861 3-isopropylmalate dehydratase activity F
IMP
SceS000002977
ISS
SpoSPAC9E9.03
GO:0016829 lyase activity F
ISS
AthAt4g13430
GO:0016836 hydro-lyase activity F
ISS
AthAt3g58990
At2g43090
At2g43100
GO:0050486 intramolecular transferase activity, transferring
hydroxy groups		 F
IMP
AthAt4g13430
GO:0006414 translational elongation P
RCA
SceS000002977
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000002977
GO:0008152 metabolic process P
ISS
AthAt3g58990
At4g13430
At2g43100
At2g43090
GO:0009098 leucine biosynthetic process P
IMP
SceS000002977
ISS
SpoSPAC9E9.03
GO:0009651 response to salt stress P
IEP
AthAt2g43090
GO:0019761 glucosinolate biosynthetic process P
IMP
AthAt4g13430
GO:0046686 response to cadmium ion P
IEP
AthAt4g13430

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5949

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) leu2
(SPAC9E9.03)		 GI:19115488 O14289
Saccharomyces cerevisiae (Sce) LEU1
(S000002977)		 GI:6321429 P07264
Kluyveromyces lactis (Kla) KLLA0A04961g GI:50302565
Eremothecium gossypii (Ego) AGOS_AGR169W GI:45201265
Magnaporthe grisea (Mgr) MGG_01553 GI:39951821
Neurospora crassa (Ncr) NCU04385.1 GI:32406250
Arabidopsis thaliana (Ath) IIL1 GI:18414006
Oryza sativa (Osa) Os02g0125100 GI:115443927


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
IDA
SceS000002977
GO:0005829 cytosol C
ISS
SpoSPAC9E9.03
GO:0009507 chloroplast C
IDA
AthIIL1
GO:0009570 chloroplast stroma C
IDA
AthIIL1
GO:0003861 3-isopropylmalate dehydratase activity F
IMP
SceS000002977
ISS
SpoSPAC9E9.03
GO:0016829 lyase activity F
ISS
AthIIL1
GO:0050486 intramolecular transferase activity, transferring
hydroxy groups		 F
IMP
AthIIL1
GO:0006414 translational elongation P
RCA
SceS000002977
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000002977
GO:0008152 metabolic process P
ISS
AthIIL1
GO:0009098 leucine biosynthetic process P
IMP
SceS000002977
ISS
SpoSPAC9E9.03
GO:0019761 glucosinolate biosynthetic process P
IMP
AthIIL1
GO:0046686 response to cadmium ion P
IEP
AthIIL1

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2991

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago4480 AGR169W
Arabidopsis thaliana (Ath) ath19105 At4g13430.1
Candida glabrata (Cgl) cgl13 CAGL0A00363g
Cryptococcus neoformans (Cne) cne2012 181.m07992
Debaryomyces hansenii (Dha) dha1987 DEHA0C12595g
Escherichia coli (Eco) eco73 16128066
Takifugu rubripes (Fru) fru26225 SINFRUP00000166832
Kluyveromyces lactis (Kla) kla215 KLLA0A04961g
Neurospora crassa (Ncr) ncr4258 NCU04385.2
Oryza sativa (Osa) osa30021 4295.m00154
Oryza sativa (Osa) osa38511 4896.m00185
Oryza sativa (Osa) osa38541 4896.m00237
Saccharomyces cerevisiae (Sce) sce2100 YGL009C
(S000002977)
Schizosaccharomyces pombe (Spo) spo1375 SPAC9E9.03 O14289
Yarrowia lipolytica (Yli) yli802 YALI0B01364g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
IDA
SceS000002977
GO:0005829 cytosol C
ISS
SpoSPAC9E9.03
GO:0009507 chloroplast C
IDA
AthAt4g13430
GO:0009570 chloroplast stroma C
IDA
AthAt4g13430
GO:0003861 3-isopropylmalate dehydratase activity F
IMP
SceS000002977
ISS
SpoSPAC9E9.03
GO:0016829 lyase activity F
ISS
AthAt4g13430
GO:0050486 intramolecular transferase activity, transferring
hydroxy groups		 F
IMP
AthAt4g13430
GO:0006414 translational elongation P
RCA
SceS000002977
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000002977
GO:0008152 metabolic process P
ISS
AthAt4g13430
GO:0009098 leucine biosynthetic process P
IMP
SceS000002977
ISS
SpoSPAC9E9.03
GO:0019761 glucosinolate biosynthetic process P
IMP
AthAt4g13430
GO:0046686 response to cadmium ion P
IEP
AthAt4g13430

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC9E9.03
(O14289)		 YGL009C
(S000002977)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
IDA
SceS000002977
GO:0005829 cytosol C
ISS
SpoSPAC9E9.03
GO:0003861 3-isopropylmalate dehydratase activity F
IMP
SceS000002977
ISS
SpoSPAC9E9.03
GO:0006414 translational elongation P
RCA
SceS000002977
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000002977
GO:0009098 leucine biosynthetic process P
IMP
SceS000002977
ISS
SpoSPAC9E9.03

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