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Search term: YGL043W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name DST1
SGD link S000003011
Alternative ID YGL043W
Description General transcription elongation factor TFIIS, enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites
Synonyms YGL043W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1105 ACDHYPE

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g38560 GI:15224901
Arabidopsis thaliana (Ath) At2g42730_2 GI:15227992
Arabidopsis thaliana (Ath) At4g18720 GI:15233998
Caenorhabditis elegans (Cel) CE03726
(WBGene00012000)		 GI:17536493 P52652
Drosophila melanogaster (Dme) 7293097 GI:7293097
Drosophila melanogaster (Dme) 7298202
(FBgn0010422)		 GI:17136888
Homo sapiens (Hsa) Hs17437957 GI:17437957
Homo sapiens (Hsa) Hs17469320 GI:17469320
Homo sapiens (Hsa) Hs18595613 GI:18595613
Homo sapiens (Hsa) Hs18599869 GI:18599869
Homo sapiens (Hsa) Hs20473950 GI:20473950
Homo sapiens (Hsa) Hs20483941 GI:20483941
Homo sapiens (Hsa) Hs4507385
(TCEA2)		 GI:4507385 Q15560
Homo sapiens (Hsa) Hs4758068 GI:4758068
Homo sapiens (Hsa) Hs5803191
(TCEA1)		 GI:5803191 P23193
Saccharomyces cerevisiae (Sce) YGL043w
(S000003011)		 GI:6321395 P07273
Schizosaccharomyces pombe (Spo) SPAC20H4.03c GI:19114535 P49373
Encephalitozoon cuniculi (Ecu) ECU04g0180 GI:19074096 Q8SS71
Arabidopsis thaliana (Ath) At2g38560 GI:15224901
Arabidopsis thaliana (Ath) At2g42730_2 GI:15227992
Arabidopsis thaliana (Ath) At4g18720 GI:15233998
Caenorhabditis elegans (Cel) CE03726
(WBGene00012000)		 GI:17536493 P52652
Drosophila melanogaster (Dme) 7293097 GI:7293097
Drosophila melanogaster (Dme) 7298202
(FBgn0010422)		 GI:17136888
Homo sapiens (Hsa) Hs17437957 GI:17437957
Homo sapiens (Hsa) Hs17469320 GI:17469320
Homo sapiens (Hsa) Hs18595613 GI:18595613
Homo sapiens (Hsa) Hs18599869 GI:18599869
Homo sapiens (Hsa) Hs20473950 GI:20473950
Homo sapiens (Hsa) Hs20483941 GI:20483941
Homo sapiens (Hsa) Hs4507385
(TCEA2)		 GI:4507385 Q15560
Homo sapiens (Hsa) Hs4758068 GI:4758068
Homo sapiens (Hsa) Hs5803191
(TCEA1)		 GI:5803191 P23193
Saccharomyces cerevisiae (Sce) YGL043w
(S000003011)		 GI:6321395 P07273
Schizosaccharomyces pombe (Spo) SPAC20H4.03c GI:19114535 P49373
Encephalitozoon cuniculi (Ecu) ECU04g0180 GI:19074096 Q8SS71


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000428 DNA-directed RNA polymerase complex C
RCA
SceS000003011
GO:0005634 nucleus C
IDA
AthAt2g38560
SpoSPAC20H4.03c
ISS
AthAt2g38560
DmeFBgn0010422
SpoSPAC20H4.03c
NAS
DmeFBgn0010422
GO:0005654 nucleoplasm C
EXP
HsaTCEA1
IPI
SceS000003011
GO:0008023 transcription elongation factor
complex		 C
NAS
HsaTCEA2
GO:0030880 RNA polymerase complex C
RCA
SceS000003011
GO:0003677 DNA binding F
ISS
AthAt2g38560
GO:0003700 transcription factor activity F
ISS
AthAt2g38560
GO:0003711 transcription elongation regulator
activity		 F
ISS
DmeFBgn0010422
NAS
DmeFBgn0010422
HsaTCEA2
GO:0003899 DNA-directed RNA polymerase activity F
RCA
SceS000003011
GO:0005515 protein binding F
IPI
HsaTCEA2
SpoSPAC20H4.03c
GO:0008159 positive transcription elongation factor
activity		 F
IDA
SceS000003011
ISS
SpoSPAC20H4.03c
GO:0016251 general RNA polymerase II transcription factor
activity		 F
IC
SpoSPAC20H4.03c
TAS
HsaTCEA1
GO:0016772 transferase activity, transferring
phosphorus-containing groups		 F
RCA
SceS000003011
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IMP
AthAt2g38560
GO:0034062 RNA polymerase activity F
RCA
SceS000003011
GO:0006354 RNA elongation P
ISS
AthAt2g38560
NAS
HsaTCEA2
GO:0006355 regulation of transcription, DNA-dependent P
ISS
AthAt2g38560
GO:0006366 transcription from RNA polymerase II
promoter		 P
TAS
HsaTCEA1
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
IDA
SceS000003011
IGI
SceS000003011
IMP
SceS000003011
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IDA
SceS000003011
ISS
SpoSPAC20H4.03c
NAS
DmeFBgn0010422
GO:0006379 mRNA cleavage P
ISS
SpoSPAC20H4.03c
GO:0009910 negative regulation of flower development P
IMP
AthAt2g38560
GO:0010162 seed dormancy P
IMP
AthAt2g38560
GO:0032784 regulation of RNA elongation P
ISS
SpoSPAC20H4.03c
GO:0045449 regulation of transcription P
ISS
DmeFBgn0010422

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
55984

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) TCEA1 GI:5803191 P23193
Pan troglodytes (Ptr) TCEA1 GI:114620133
Canis familiaris (Cfa) TCEA1 GI:73999378
Mus musculus (Mmu) Tcea1
(MGI:1196624)		 GI:6755728 P10711
Rattus norvegicus (Rno) Tcea1
(RGD:1309880)		 GI:71043668
Gallus gallus (Gga) TCEA1 GI:57530393
Caenorhabditis elegans (Cel) T24H10.1
(CE03726;
WBGene00012000)		 GI:17536493 P52652
Schizosaccharomyces pombe (Spo) tfs1
(SPAC20H4.03c)		 GI:19114535 P49373
Saccharomyces cerevisiae (Sce) DST1
(S000003011)		 GI:6321395 P07273
Kluyveromyces lactis (Kla) KLLA0F09361g GI:50310967
Eremothecium gossypii (Ego) AGOS_AGR011W GI:45201106
Magnaporthe grisea (Mgr) MGG_13511 GI:145616052
Neurospora crassa (Ncr) NCU02563.1 GI:32422637


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000428 DNA-directed RNA polymerase complex C
RCA
SceS000003011
GO:0005634 nucleus C
IDA
SpoSPAC20H4.03c
ISS
SpoSPAC20H4.03c
GO:0005654 nucleoplasm C
EXP
HsaTCEA1
IDA
MmuMGI:1196624
IPI
SceS000003011
GO:0030880 RNA polymerase complex C
RCA
SceS000003011
GO:0003899 DNA-directed RNA polymerase activity F
RCA
SceS000003011
GO:0005515 protein binding F
IPI
MmuMGI:1196624
SpoSPAC20H4.03c
GO:0008159 positive transcription elongation factor
activity		 F
IDA
SceS000003011
ISS
SpoSPAC20H4.03c
GO:0016251 general RNA polymerase II transcription factor
activity		 F
IC
SpoSPAC20H4.03c
TAS
HsaTCEA1
GO:0016772 transferase activity, transferring
phosphorus-containing groups		 F
RCA
SceS000003011
GO:0034062 RNA polymerase activity F
RCA
SceS000003011
GO:0006366 transcription from RNA polymerase II
promoter		 P
TAS
HsaTCEA1
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
IDA
SceS000003011
IGI
SceS000003011
IMP
SceS000003011
GO:0006368 RNA elongation from RNA polymerase II
promoter		 P
IDA
SceS000003011
ISS
SpoSPAC20H4.03c
GO:0006379 mRNA cleavage P
ISS
SpoSPAC20H4.03c
GO:0030218 erythrocyte differentiation P
IMP
MmuMGI:1196624
GO:0032784 regulation of RNA elongation P
ISS
SpoSPAC20H4.03c
GO:0045893 positive regulation of transcription,
DNA-dependent		 P
IDA
MmuMGI:1196624
GO:0045944 positive regulation of transcription from RNA
polymerase II promoter		 P
IDA
MmuMGI:1196624

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_456

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga11142 ENSANGP00000005186
Anopheles gambiae (Aga) aga11143 ENSANGP00000027484
Ashbya gossypii (Ago) ago4321 AGR011W
Arabidopsis thaliana (Ath) ath10960 At2g38560.1
Caenorhabditis elegans (Cel) cel16280 T24H10.1
(CE03726;
WBGene00012000)
Candida glabrata (Cgl) cgl919 CAGL0D06160g
Cryptococcus neoformans (Cne) cne1348 180.m00295
Dictyostelium discoideum (Ddi) ddi12354 DDB0216299
Debaryomyces hansenii (Dha) dha2123 DEHA0C15686g
Drosophila melanogaster (Dme) dme2473 CG3710-PA
(FBgn0010422)
Danio rerio (Dre) dre25311 ENSDARP00000002994
(tcea2)		 Q7ZUY7
Danio rerio (Dre) dre11286 ENSDARP00000009554
Danio rerio (Dre) dre11287 ENSDARP00000046396
(tcea1)		 Q7T3C1
Encephalitozoon cuniculi (Ecu) ecu734 19074096
Takifugu rubripes (Fru) fru374 SINFRUP00000153733
Takifugu rubripes (Fru) fru372 SINFRUP00000153737
Takifugu rubripes (Fru) fru373 SINFRUP00000153738
Takifugu rubripes (Fru) fru23791 SINFRUP00000162345
Takifugu rubripes (Fru) fru23790 SINFRUP00000162347
Takifugu rubripes (Fru) fru371 SINFRUP00000174721
Gallus gallus (Gga) gga12031 ENSGALP00000009592
Gallus gallus (Gga) gga12032 ENSGALP00000009593
Gallus gallus (Gga) gga12033 ENSGALP00000009594
(TCEA2)
Gallus gallus (Gga) gga12034 ENSGALP00000009595
Gallus gallus (Gga) gga12035 ENSGALP00000009596
Gallus gallus (Gga) gga11121 ENSGALP00000024608
(TCEA1)
Gallus gallus (Gga) gga11122 ENSGALP00000024609
(TCEA1)		 Q5ZHQ8
Gallus gallus (Gga) gga11123 ENSGALP00000024610
Homo sapiens (Hsa) hsa20679 ENSP00000306189
Homo sapiens (Hsa) hsa30305 ENSP00000321793
Homo sapiens (Hsa) hsa20677 ENSP00000339432
(TCEA2)		 Q5JRI7
Homo sapiens (Hsa) hsa20678 ENSP00000343515
(TCEA2)		 Q15560
Homo sapiens (Hsa) hsa30304 ENSP00000353558
(TCEA1)
Homo sapiens (Hsa) hsa20680 ENSP00000354552
(TCEA2)
Kluyveromyces lactis (Kla) kla4506 KLLA0F09361g
Mus musculus (Mmu) mmu19142 ENSMUSP00000001648
Mus musculus (Mmu) mmu10 ENSMUSP00000044588
Mus musculus (Mmu) mmu9 ENSMUSP00000045692
Mus musculus (Mmu) mmu16314 ENSMUSP00000080266
(MGI:1196624)		 P10711-1
Neurospora crassa (Ncr) ncr2484 NCU02563.2
Oryza sativa (Osa) osa3753 2061.m00224
Oryza sativa (Osa) osa53427 6131.m00140
Oryza sativa (Osa) osa62949 6683.m00205
Oryza sativa (Osa) osa63756 6744.m00045
Oryza sativa (Osa) osa86304 8348.m00034
Plasmodium falciparum (Pfa) pfa2387 PF07_0057
Rattus norvegicus (Rno) rno11058 ENSRNOP00000007696
Rattus norvegicus (Rno) rno22694 ENSRNOP00000010893
(RGD:1309880)		 Q4KLL0
Rattus norvegicus (Rno) rno24166 ENSRNOP00000015776
(RGD:1311369)		 Q5BK74
Rattus norvegicus (Rno) rno20543 ENSRNOP00000022073
(RGD:61825)		 Q63799
Rattus norvegicus (Rno) rno22693 ENSRNOP00000044016
Rattus norvegicus (Rno) rno22692 ENSRNOP00000045336
Saccharomyces cerevisiae (Sce) sce2137 YGL043W
(S000003011)
Schizosaccharomyces pombe (Spo) spo1344 SPAC20H4.03c P49373
Yarrowia lipolytica (Yli) yli4237 YALI0E09196g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000428 DNA-directed RNA polymerase complex C
RCA
SceS000003011
GO:0005634 nucleus C
IDA
AthAt2g38560
SpoSPAC20H4.03c
ISS
AthAt2g38560
DmeFBgn0010422
SpoSPAC20H4.03c
NAS
DmeFBgn0010422
GO:0005654 nucleoplasm C
IDA
MmuMGI:1196624
IPI
SceS000003011
GO:0008023 transcription elongation factor
complex		 C
ISS
PfaPF07_0057
GO:0030880 RNA polymerase complex C
RCA
SceS000003011
GO:0003677 DNA binding F
ISS
AthAt2g38560
GO:0003700 transcription factor activity F
ISS
AthAt2g38560
GO:0003711 transcription elongation regulator
activity		 F
ISS
DmeFBgn0010422
PfaPF07_0057
NAS
DmeFBgn0010422
GO:0003899 DNA-directed RNA polymerase activity F
RCA
SceS000003011
GO:0005515 protein binding F
IPI
MmuMGI:1196624
SpoSPAC20H4.03c
GO:0008159 positive transcription elongation factor
activity		 F
IDA
SceS000003011
ISS
SpoSPAC20H4.03c
GO:0016251 general RNA polymerase II transcription factor
activity		 F
IC
SpoSPAC20H4.03c
GO:0016772 transferase activity, transferring
phosphorus-containing groups		 F
RCA
SceS000003011
GO:0016944 RNA polymerase II transcription elongation factor
activity		 F
IMP
AthAt2g38560
GO:0034062 RNA polymerase activity F
RCA
SceS000003011
GO:0006354 RNA elongation P
ISS
AthAt2g38560
GO:0006355 regulation of transcription, DNA-dependent P
ISS
AthAt2g38560
GO:0006357 regulation of transcription from RNA polymerase II
promoter		 P
ISS
Pfa