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Search term: YGL122C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name NAB2
SGD link S000003090
Alternative ID YGL122C
Description Nuclear polyadenylated RNA-binding protein required for nuclear mRNA export and poly(A) tail length control; binds nuclear pore protein Mlp1p; autoregulates mRNA levels; related to human hnRNPs; nuclear localization sequence binds Kap104p
Synonyms YGL122C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3702 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Nuclear polyadenylated RNA binding protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g12640 GI:12321948
Caenorhabditis elegans (Cel) CE27414 GI:17566144
Drosophila melanogaster (Dme) 7301144 GI:5901864
Homo sapiens (Hsa) Hs13376222 GI:13376222
Saccharomyces cerevisiae (Sce) YGL122c
(S000003090)		 GI:6321316 P32505
Schizosaccharomyces pombe (Spo) SPAC14C4.06c GI:19115823 O13713


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g12640
GO:0005634 nucleus C
IDA
SceS000003090
SpoSPAC14C4.06c
ISS
SpoSPAC14C4.06c
GO:0005635 nuclear envelope C
IDA
SpoSPAC14C4.06c
GO:0005737 cytoplasm C
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0003676 nucleic acid binding F
ISS
AthAt3g12640
GO:0003723 RNA binding F
ISS
AthAt3g12640
GO:0008143 poly(A) RNA binding F
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0006378 mRNA polyadenylation P
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0008150 biological_process P
ND
AthAt3g12640
GO:0016973 poly(A)+ mRNA export from nucleus P
IMP
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0043488 regulation of mRNA stability P
IMP
SceS000003090
IPI
SceS000003090

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39026

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) NAB2
(S000003090)		 GI:6321316 P32505
Kluyveromyces lactis (Kla) KLLA0F09845g GI:50311009
Eremothecium gossypii (Ego) AGOS_AAR178C GI:45185003


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003090
GO:0005737 cytoplasm C
IDA
SceS000003090
GO:0008143 poly(A) RNA binding F
IDA
SceS000003090
GO:0006378 mRNA polyadenylation P
IDA
SceS000003090
GO:0016973 poly(A)+ mRNA export from nucleus P
IMP
SceS000003090
GO:0043488 regulation of mRNA stability P
IMP
SceS000003090
IPI
SceS000003090

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_11849

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga11135 ENSANGP00000023939
Ashbya gossypii (Ago) ago366 AAR178C
Candida glabrata (Cgl) cgl1535 CAGL0F07095g
Cryptococcus neoformans (Cne) cne2566 181.m08745
Debaryomyces hansenii (Dha) dha430 DEHA0A09680g
Gallus gallus (Gga) gga19662 ENSGALP00000017264
Kluyveromyces lactis (Kla) kla4528 KLLA0F09845g
Saccharomyces cerevisiae (Sce) sce2216 YGL122C
(S000003090)
Schizosaccharomyces pombe (Spo) spo2320 SPAC14C4.06c O13713
Yarrowia lipolytica (Yli) yli4433 YALI0E13794g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003090
SpoSPAC14C4.06c
ISS
SpoSPAC14C4.06c
GO:0005635 nuclear envelope C
IDA
SpoSPAC14C4.06c
GO:0005737 cytoplasm C
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0008143 poly(A) RNA binding F
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0006378 mRNA polyadenylation P
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0016973 poly(A)+ mRNA export from nucleus P
IMP
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0043488 regulation of mRNA stability P
IMP
SceS000003090
IPI
SceS000003090

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC14C4.06c
(O13713)		 YGL122C
(S000003090)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SceS000003090
SpoSPAC14C4.06c
ISS
SpoSPAC14C4.06c
GO:0005635 nuclear envelope C
IDA
SpoSPAC14C4.06c
GO:0005737 cytoplasm C
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0008143 poly(A) RNA binding F
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0006378 mRNA polyadenylation P
IDA
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0016973 poly(A)+ mRNA export from nucleus P
IMP
SceS000003090
ISS
SpoSPAC14C4.06c
GO:0043488 regulation of mRNA stability P
IMP
SceS000003090
IPI
SceS000003090

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