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Search term: YGL161C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name YIP5
SGD link S000003129
Alternative ID YGL161C
Description Protein that interacts with Rab GTPases, localized to late Golgi vesicles; computational analysis of large-scale protein-protein interaction data suggests a possible role in vesicle-mediated transport
Synonyms YGL161C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3114 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At3g05280 GI:15229949
Arabidopsis thaliana (Ath) At5g27490 GI:15240957
Caenorhabditis elegans (Cel) CE14888_1 GI:17537409
Caenorhabditis elegans (Cel) CE21474 GI:17536973
Caenorhabditis elegans (Cel) CE21475 GI:17536971 Q9TYM1
Drosophila melanogaster (Dme) 7292820 GI:7292820
Homo sapiens (Hsa) Hs10092643
(YIPF1)		 GI:10092643 Q9Y548
Homo sapiens (Hsa) Hs7661642 GI:7661642
Homo sapiens (Hsa) Hs13128976
(YIPF2)		 GI:13128976 Q9BWQ6
Saccharomyces cerevisiae (Sce) YGL161c
(S000003129)		 GI:6321277 P53108
Schizosaccharomyces pombe (Spo) SPAC227.06 GI:19113872 Q9UTD3


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt3g05280
At5g27490
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC227.06
GO:0005794 Golgi apparatus C
IDA
SceS000003129
ISS
SpoSPAC227.06
GO:0030133 transport vesicle C
IDA
HsaYIPF1
YIPF2
GO:0003674 molecular_function F
ND
AthAt5g27490
At3g05280
GO:0017137 Rab GTPase binding F
IPI
SceS000003129
ISS
SpoSPAC227.06
GO:0008150 biological_process P
ND
AthAt5g27490
At3g05280
SceS000003129
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC227.06

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_16731

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Cryptococcus neoformans (Cne) cne1815 164.m02825
Takifugu rubripes (Fru) fru16286 SINFRUP00000150065
Homo sapiens (Hsa) hsa15641 ENSP00000253031
(YIPF2)		 Q9BWQ6
Mus musculus (Mmu) mmu27171 ENSMUSP00000034700
(MGI:1922016)		 Q99LP8
Mus musculus (Mmu) mmu27170 ENSMUSP00000077649
(MGI:1922016)		 Q99LP8
Rattus norvegicus (Rno) rno28114 ENSRNOP00000012138
(RGD:1307512)		 Q5XIT3
Saccharomyces cerevisiae (Sce) sce2256 YGL161C
(S000003129)


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1922016
GO:0005794 Golgi apparatus C
IDA
SceS000003129
GO:0003674 molecular_function F
ND
MmuMGI:1922016
GO:0017137 Rab GTPase binding F
IPI
SceS000003129
GO:0008150 biological_process P
ND
MmuMGI:1922016
SceS000003129

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC227.06
(Q9UTD3)		 YGL161C
(S000003129)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC227.06
GO:0005794 Golgi apparatus C
IDA
SceS000003129
ISS
SpoSPAC227.06
GO:0017137 Rab GTPase binding F
IPI
SceS000003129
ISS
SpoSPAC227.06
GO:0008150 biological_process P
ND
SceS000003129
GO:0016192 vesicle-mediated transport P
ISS
SpoSPAC227.06

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s.khadayate@ucl.ac.uk