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Search term: YGL187C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name COX4
SGD link S000003155
Alternative ID YGL187C
Description Subunit IV of cytochrome c oxidase, the terminal member of the mitochondrial inner membrane electron transport chain; precursor N-terminal 25 residues are cleaved during mitochondrial import; phosphorylated; spermidine enhances translation
Synonyms YGL187C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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Query species:

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Search for GO info:  

GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3352 ACDHYP-

KOGs classification KOGs description
METABOLISM Cytochrome c oxidase, subunit Vb/COX4

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g80230 GI:15220092
Arabidopsis thaliana (Ath) At3g15640 GI:15232644
Caenorhabditis elegans (Cel) CE09693
(WBGene00000371)		 GI:17506881 P90849
Drosophila melanogaster (Dme) 7297135 GI:18467368
Drosophila melanogaster (Dme) 7297136 GI:20129281
Homo sapiens (Hsa) Hs18543866 GI:18543866
Homo sapiens (Hsa) Hs18579210 GI:18579210
Homo sapiens (Hsa) Hs17017988
(COX5B)		 GI:17017988 P10606
Saccharomyces cerevisiae (Sce) YGL187c
(S000003155)		 GI:6321251 P04037
Schizosaccharomyces pombe (Spo) SPAC1296.02 GI:19113954 P79010


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt3g15640
At1g80230
SceS000003155
SpoSPAC1296.02
GO:0005740 mitochondrial envelope C
ISS
AthAt1g80230
At3g15640
GO:0005751 mitochondrial respiratory chain complex
IV		 C
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0009535 chloroplast thylakoid membrane C
IDA
AthAt3g15640
GO:0004129 cytochrome-c oxidase activity F
IPI
SceS000003155
ISS
AthAt3g15640
At1g80230
SpoSPAC1296.02
GO:0008270 zinc ion binding F
IDA
AthAt3g15640
SceS000003155
GO:0046872 metal ion binding F
IDA
AthAt3g15640
GO:0050897 cobalt ion binding F
IDA
AthAt3g15640
GO:0000003 reproduction P
IMP
CelWBGene00000371
GO:0002119 nematode larval development P
IMP
CelWBGene00000371
GO:0006123 mitochondrial electron transport, cytochrome c to
oxygen		 P
IDA
SceS000003155
ISS
SpoSPAC1296.02
GO:0006629 lipid metabolic process P
IMP
CelWBGene00000371
GO:0006811 ion transport P
RCA
SceS000003155
GO:0007585 respiratory gaseous exchange P
TAS
HsaCOX5B
GO:0008219 cell death P
RCA
SceS000003155
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00000371
GO:0009060 aerobic respiration P
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0009117 nucleotide metabolic process P
RCA
SceS000003155
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00000371
GO:0019915 lipid storage P
IMP
CelWBGene00000371
GO:0040007 growth P
IMP
CelWBGene00000371
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00000371
GO:0051186 cofactor metabolic process P
RCA
SceS000003155
GO:0055114 oxidation reduction P
RCA
SceS000003155

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39000

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) cox4
(SPAC1296.02)		 GI:19113954 P79010
Saccharomyces cerevisiae (Sce) COX4
(S000003155)		 GI:6321251 P04037
Kluyveromyces lactis (Kla) KLLA0D05082g GI:50306625
Eremothecium gossypii (Ego) AGOS_AFR193W GI:45198711
Magnaporthe grisea (Mgr) MGG_01135 GI:145610521
Neurospora crassa (Ncr) NCU05689.1 GI:32410127


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003155
SpoSPAC1296.02
GO:0005751 mitochondrial respiratory chain complex
IV		 C
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0004129 cytochrome-c oxidase activity F
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0008270 zinc ion binding F
IDA
SceS000003155
GO:0006123 mitochondrial electron transport, cytochrome c to
oxygen		 P
IDA
SceS000003155
ISS
SpoSPAC1296.02
GO:0006811 ion transport P
RCA
SceS000003155
GO:0008219 cell death P
RCA
SceS000003155
GO:0009060 aerobic respiration P
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0009117 nucleotide metabolic process P
RCA
SceS000003155
GO:0051186 cofactor metabolic process P
RCA
SceS000003155
GO:0055114 oxidation reduction P
RCA
SceS000003155

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_2448

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga10758 ENSANGP00000011122
Ashbya gossypii (Ago) ago3385 AFR193W
Arabidopsis thaliana (Ath) ath7406 At1g80230.1
Arabidopsis thaliana (Ath) ath13793 At3g15640.1
Caenorhabditis elegans (Cel) cel7389 F26E4.9
(CE09693;
WBGene00000371)
Candida glabrata (Cgl) cgl4347 CAGL0L06160g
Dictyostelium discoideum (Ddi) ddi11362 DDB0191104
Debaryomyces hansenii (Dha) dha888 DEHA0B04557
Drosophila melanogaster (Dme) dme1080 CG11015-PA
(FBgn0031830)
Danio rerio (Dre) dre26961 ENSDARP00000006695
Danio rerio (Dre) dre20895 ENSDARP00000016376
Danio rerio (Dre) dre22885 ENSDARP00000023507
Takifugu rubripes (Fru) fru1001 SINFRUP00000135634
Takifugu rubripes (Fru) fru4616 SINFRUP00000160784
Homo sapiens (Hsa) hsa18287 ENSP00000258424
(COX5B)		 P10606
Kluyveromyces lactis (Kla) kla2285 KLLA0D05082g
Mus musculus (Mmu) mmu6593 ENSMUSP00000038961
(MGI:88475)		 Q9D881
Mus musculus (Mmu) mmu197 ENSMUSP00000079944
(MGI:88475)		 Q9D881
Neurospora crassa (Ncr) ncr5528 NCU05689.2
Oryza sativa (Osa) osa14520 3015.m00174
Oryza sativa (Osa) osa35343 4774.m00135
Plasmodium falciparum (Pfa) pfa4739 PFI1365w
Rattus norvegicus (Rno) rno17868 ENSRNOP00000000700
Rattus norvegicus (Rno) rno29882 ENSRNOP00000022487
(RGD:620608)		 P12075
Saccharomyces cerevisiae (Sce) sce2282 YGL187C
(S000003155)
Schizosaccharomyces pombe (Spo) spo1782 SPAC1296.02 P79010
Yarrowia lipolytica (Yli) yli4677 YALI0E19723g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
AthAt3g15640
At1g80230
MmuMGI:88475
SceS000003155
SpoSPAC1296.02
ISS
DmeFBgn0031830
GO:0005740 mitochondrial envelope C
ISS
AthAt1g80230
At3g15640
GO:0005743 mitochondrial inner membrane C
IDA
MmuMGI:88475
GO:0005751 mitochondrial respiratory chain complex
IV		 C
IPI
SceS000003155
ISS
DmeFBgn0031830
SpoSPAC1296.02
GO:0005811 lipid particle C
IDA
DmeFBgn0031830
GO:0009535 chloroplast thylakoid membrane C
IDA
AthAt3g15640
GO:0004129 cytochrome-c oxidase activity F
IPI
SceS000003155
ISS
AthAt3g15640
At1g80230
DmeFBgn0031830
SpoSPAC1296.02
GO:0008270 zinc ion binding F
IDA
AthAt3g15640
SceS000003155
GO:0046872 metal ion binding F
IDA
AthAt3g15640
GO:0050897 cobalt ion binding F
IDA
AthAt3g15640
GO:0000003 reproduction P
IMP
CelWBGene00000371
GO:0002119 nematode larval development P
IMP
CelWBGene00000371
GO:0006123 mitochondrial electron transport, cytochrome c to
oxygen		 P
IDA
SceS000003155
ISS
DmeFBgn0031830
SpoSPAC1296.02
GO:0006629 lipid metabolic process P
IMP
CelWBGene00000371
GO:0006811 ion transport P
RCA
SceS000003155
GO:0008219 cell death P
RCA
SceS000003155
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00000371
GO:0009060 aerobic respiration P
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0009117 nucleotide metabolic process P
RCA
SceS000003155
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00000371
GO:0019915 lipid storage P
IMP
CelWBGene00000371
GO:0040007 growth P
IMP
CelWBGene00000371
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00000371
GO:0051186 cofactor metabolic process P
RCA
SceS000003155
GO:0055114 oxidation reduction P
RCA
SceS000003155

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC1296.02
(P79010)		 YGL187C
(S000003155)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003155
SpoSPAC1296.02
GO:0005751 mitochondrial respiratory chain complex
IV		 C
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0004129 cytochrome-c oxidase activity F
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0008270 zinc ion binding F
IDA
SceS000003155
GO:0006123 mitochondrial electron transport, cytochrome c to
oxygen		 P
IDA
SceS000003155
ISS
SpoSPAC1296.02
GO:0006811 ion transport P
RCA
SceS000003155
GO:0008219 cell death P
RCA
SceS000003155
GO:0009060 aerobic respiration P
IPI
SceS000003155
ISS
SpoSPAC1296.02
GO:0009117 nucleotide metabolic process P
RCA
SceS000003155
GO:0051186 cofactor metabolic process P
RCA
SceS000003155
GO:0055114 oxidation reduction P
RCA
SceS000003155

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Query species:

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GO info in one table:

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