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Search term: YGL224C


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SDT1
SGD link S000003192
Alternative ID YGL224C
Description Pyrimidine nucleotidase; overexpression suppresses the 6-AU sensitivity of transcription elongation factor S-II, as well as resistance to other pyrimidine derivatives
Synonyms YGL224C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG3109 A---YPE

KOGs classification KOGs description
POORLY CHARACTERIZED Haloacid dehalogenase-like hydrolase

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g32150 GI:15225196
Arabidopsis thaliana (Ath) At3g62040 GI:15228675
Arabidopsis thaliana (Ath) At5g02230 GI:15241720
Arabidopsis thaliana (Ath) At5g59480 GI:15238427
Arabidopsis thaliana (Ath) At5g59490 GI:15238429
Saccharomyces cerevisiae (Sce) YER037w
(S000000839)
GI:6320875 P40025
Saccharomyces cerevisiae (Sce) YGL224c
(S000003192)
GI:6321214 P53078
Schizosaccharomyces pombe (Spo) SPAC24B11.05 GI:19113754 Q09893
Encephalitozoon cuniculi (Ecu) ECU05g1170 GI:19173657 Q8SVH9


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g59490
At2g32150
At5g59480
At5g02230
SceS000003192
GO:0005634 nucleus C
IDA
SceS000000839
SpoSPAC24B11.05
ISS
SpoSPAC24B11.05
GO:0005737 cytoplasm C
IDA
SceS000000839
ISS
SpoSPAC24B11.05
GO:0005829 cytosol C
IDA
SpoSPAC24B11.05
GO:0003674 molecular_function F
ND
SceS000000839
GO:0008252 nucleotidase activity F
IDA
SceS000003192
ISS
SpoSPAC24B11.05
GO:0016787 hydrolase activity F
ISS
AthAt5g59480
At5g59490
At2g32150
At3g62040
At5g02230
GO:0016791 phosphatase activity F
RCA
SceS000000839
GO:0047405 pyrimidine-5'-nucleotide nucleosidase
activity
F
NAS
SpoSPAC24B11.05
GO:0006082 organic acid metabolic process P
RCA
SceS000003192
GO:0006206 pyrimidine base metabolic process P
IMP
SceS000003192
ISS
SpoSPAC24B11.05
GO:0006519 cellular amino acid and derivative metabolic
process
P
RCA
SceS000003192
GO:0006725 cellular aromatic compound metabolic
process
P
RCA
SceS000003192
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003192
GO:0008150 biological_process P
ND
SceS000000839

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
38987

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC24B11.05 GI:19113754 Q09893
Saccharomyces cerevisiae (Sce) SDT1
(S000003192)
GI:6321214 P53078
Kluyveromyces lactis (Kla) KLLA0A01408g GI:50302255
Eremothecium gossypii (Ego) AGOS_AFR234W GI:45198752
Magnaporthe grisea (Mgr) MGG_01783 GI:145613243
Neurospora crassa (Ncr) NCU05264.1 GI:32408279
Arabidopsis thaliana (Ath) AT3G62040 GI:79456826
Oryza sativa (Osa) Os07g0634400 GI:115473565


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000003192
GO:0005634 nucleus C
IDA
SpoSPAC24B11.05
ISS
SpoSPAC24B11.05
GO:0005737 cytoplasm C
ISS
SpoSPAC24B11.05
GO:0005829 cytosol C
IDA
SpoSPAC24B11.05
GO:0008252 nucleotidase activity F
IDA
SceS000003192
ISS
SpoSPAC24B11.05
GO:0016787 hydrolase activity F
ISS
AthAt3g62040
GO:0047405 pyrimidine-5'-nucleotide nucleosidase
activity
F
NAS
SpoSPAC24B11.05
GO:0006082 organic acid metabolic process P
RCA
SceS000003192
GO:0006206 pyrimidine base metabolic process P
IMP
SceS000003192
ISS
SpoSPAC24B11.05
GO:0006519 cellular amino acid and derivative metabolic
process
P
RCA
SceS000003192
GO:0006725 cellular aromatic compound metabolic
process
P
RCA
SceS000003192
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003192

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_6811

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Ashbya gossypii (Ago) ago3426 AFR234W
Arabidopsis thaliana (Ath) ath17651 At3g62040.1
Arabidopsis thaliana (Ath) ath22367 At5g02230.1
Arabidopsis thaliana (Ath) ath22368 At5g02230.2
Arabidopsis thaliana (Ath) ath28018 At5g59490.1
Candida glabrata (Cgl) cgl2467 CAGL0H09218g
Dictyostelium discoideum (Ddi) ddi13560 DDB0231388
Debaryomyces hansenii (Dha) dha6642 DEHA0G21076g
Kluyveromyces lactis (Kla) kla58 KLLA0A01408g
Neurospora crassa (Ncr) ncr5109 NCU05264.2
Oryza sativa (Osa) osa25610 3896.m00129
Oryza sativa (Osa) osa73855 7280.m00132
Saccharomyces cerevisiae (Sce) sce2320 YGL224C
(S000003192)
Schizosaccharomyces pombe (Spo) spo4805 SPAC24B11.05 Q09893
Yarrowia lipolytica (Yli) yli6463 YALI0F26785g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt5g59490
At5g02230
SceS000003192
GO:0005634 nucleus C
IDA
SpoSPAC24B11.05
ISS
SpoSPAC24B11.05
GO:0005737 cytoplasm C
ISS
SpoSPAC24B11.05
GO:0005829 cytosol C
IDA
SpoSPAC24B11.05
GO:0008252 nucleotidase activity F
IDA
SceS000003192
ISS
SpoSPAC24B11.05
GO:0016787 hydrolase activity F
ISS
AthAt5g59490
At3g62040
At5g02230
GO:0047405 pyrimidine-5'-nucleotide nucleosidase
activity
F
NAS
SpoSPAC24B11.05
GO:0006082 organic acid metabolic process P
RCA
SceS000003192
GO:0006206 pyrimidine base metabolic process P
IMP
SceS000003192
ISS
SpoSPAC24B11.05
GO:0006519 cellular amino acid and derivative metabolic
process
P
RCA
SceS000003192
GO:0006725 cellular aromatic compound metabolic
process
P
RCA
SceS000003192
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003192

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPAC24B11.05
(Q09893)
YGL224C
(S000003192)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
SceS000003192
GO:0005634 nucleus C
IDA
SpoSPAC24B11.05
ISS
SpoSPAC24B11.05
GO:0005737 cytoplasm C
ISS
SpoSPAC24B11.05
GO:0005829 cytosol C
IDA
SpoSPAC24B11.05
GO:0008252 nucleotidase activity F
IDA
SceS000003192
ISS
SpoSPAC24B11.05
GO:0047405 pyrimidine-5'-nucleotide nucleosidase
activity
F
NAS
SpoSPAC24B11.05
GO:0006082 organic acid metabolic process P
RCA
SceS000003192
GO:0006206 pyrimidine base metabolic process P
IMP
SceS000003192
ISS
SpoSPAC24B11.05
GO:0006519 cellular amino acid and derivative metabolic
process
P
RCA
SceS000003192
GO:0006725 cellular aromatic compound metabolic
process
P
RCA
SceS000003192
GO:0006807 nitrogen compound metabolic process P
RCA
SceS000003192

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GO info in one table:

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