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Search term: YGL225W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name VRG4
SGD link S000003193
Alternative ID YGL225W
Description Golgi GDP-mannose transporter; regulates Golgi function and glycosylation in Golgi
Synonyms YGL225W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1444 ACDHYPE

KOGs classification KOGs description
METABOLISMCELLULAR PROCESSES AND SIGNALINGCELLULAR PROCESSES AND SIGNALING Nucleotide-sugar transporter VRG4/SQV-7

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At1g07290 GI:15222352
Arabidopsis thaliana (Ath) At1g76340 GI:15223013
Arabidopsis thaliana (Ath) At2g13650 GI:15225455
Arabidopsis thaliana (Ath) At4g31600 GI:7486328
Arabidopsis thaliana (Ath) At4g32270_1 GI:15236724
Arabidopsis thaliana (Ath) At5g19980 GI:15241236
Caenorhabditis elegans (Cel) CE04263
(WBGene00005025)		 GI:17535737 Q18779
Caenorhabditis elegans (Cel) CE23840 GI:17541156
Drosophila melanogaster (Dme) 7293986
(FBgn0042641)		 GI:17647441 B7Z066
Homo sapiens (Hsa) Hs14028875
(SLC35D1)		 GI:14028875 Q9NTN3
Homo sapiens (Hsa) Hs17463142 GI:17463142
Homo sapiens (Hsa) Hs22059556 GI:22059556
Saccharomyces cerevisiae (Sce) YER039c
(S000000841)		 GI:6320877 P40027
Saccharomyces cerevisiae (Sce) YER039c-a GI:6320878 Q3E844
Saccharomyces cerevisiae (Sce) YGL225w
(S000003193)		 GI:6321213 P40107
Schizosaccharomyces pombe (Spo) SPAC144.18 GI:19115591 Q9UTK8
Encephalitozoon cuniculi (Ecu) ECU03g0150 GI:19172975 Q8SSD1


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g07290
SceS000000841
YER039c-a
GO:0005737 cytoplasm C
IDA
CelWBGene00005025
GO:0005739 mitochondrion C
IDA
SceS000003193
GO:0005789 endoplasmic reticulum membrane C
EXP
HsaSLC35D1
GO:0005794 Golgi apparatus C
IDA
AthAt5g19980
At2g13650
SceS000003193
SpoSPAC144.18
NAS
DmeFBgn0042641
GO:0005886 plasma membrane C
IDA
AthAt4g32270
GO:0016020 membrane C
ISS
AthAt4g31600
At5g19980
At1g76340
GO:0030176 integral to endoplasmic reticulum
membrane		 C
NAS
HsaSLC35D1
GO:0003674 molecular_function F
ND
AthAt4g32270
SceYER039c-a
S000000841
GO:0005338 nucleotide-sugar transmembrane transporter
activity		 F
IMP
SceS000003193
ISS
AthAt2g13650
At1g07290
SceS000003193
SpoSPAC144.18
GO:0005458 GDP-mannose transmembrane transporter
activity		 F
IDA
AthAt2g13650
GO:0005459 UDP-galactose transmembrane transporter
activity		 F
IDA
DmeFBgn0042641
GO:0005460 UDP-glucose transmembrane transporter
activity		 F
IDA
DmeFBgn0042641
GO:0005461 UDP-glucuronic acid transmembrane transporter
activity		 F
EXP
HsaSLC35D1
IDA
DmeFBgn0042641
GO:0005462 UDP-N-acetylglucosamine transmembrane transporter
activity		 F
IDA
DmeFBgn0042641
GO:0005463 UDP-N-acetylgalactosamine transmembrane
transporter activity		 F
NAS
HsaSLC35D1
GO:0005464 UDP-xylose transmembrane transporter
activity		 F
IDA
DmeFBgn0042641
GO:0015165 pyrimidine nucleotide sugar transmembrane
transporter activity		 F
NAS
DmeFBgn0042641
GO:0015297 antiporter activity F
IDA
DmeFBgn0042641
GO:0000003 reproduction P
IMP
CelWBGene00005025
GO:0001745 compound eye morphogenesis P
IMP
DmeFBgn0042641
GO:0002009 morphogenesis of an epithelium P
IMP
CelWBGene00005025
GO:0006065 UDP-glucuronate biosynthetic process P
EXP
HsaSLC35D1
GO:0006487 protein amino acid N-linked glycosylation P
IMP
SceS000003193
ISS
SpoSPAC144.18
GO:0007220 Notch receptor processing P
NAS
DmeFBgn0042641
GO:0007367 segment polarity determination P
IMP
DmeFBgn0042641
GO:0007423 sensory organ development P
IMP
DmeFBgn0042641
GO:0007447 imaginal disc pattern formation P
IMP
DmeFBgn0042641
GO:0007476 imaginal disc-derived wing morphogenesis P
IMP
DmeFBgn0042641
GO:0008150 biological_process P
ND
AthAt4g32270
SceYER039c-a
S000000841
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00005025
GO:0009880 embryonic pattern specification P
IMP
DmeFBgn0042641
GO:0015780 nucleotide-sugar transport P
IDA
SceS000003193
IGI
AthAt5g19980
At1g07290
At1g76340
IMP
SceS000003193
ISS
SpoSPAC144.18
GO:0015781 pyrimidine nucleotide-sugar transport P
NAS
DmeFBgn0042641
GO:0015784 GDP-mannose transport P
IGI
AthAt1g07290
At2g13650
IMP
AthAt2g13650
GO:0015785 UDP-galactose transport P
IDA
DmeFBgn0042641
GO:0015786 UDP-glucose transport P
IDA
DmeFBgn0042641
GO:0015787 UDP-glucuronic acid transport P
IDA
DmeFBgn0042641
GO:0015788 UDP-N-acetylglucosamine transport P
IDA
DmeFBgn0042641
GO:0015789 UDP-N-acetylgalactosamine transport P
NAS
HsaSLC35D1
GO:0015790 UDP-xylose transport P
IDA
DmeFBgn0042641
GO:0016192 vesicle-mediated transport P
RCA
SceS000003193
GO:0018991 oviposition P
IMP
CelWBGene00005025
GO:0030206 chondroitin sulfate biosynthetic
process		 P
NAS
HsaSLC35D1
GO:0030259 lipid glycosylation P
IMP
SceS000003193
GO:0034219 carbohydrate transmembrane transport P
ISS
SpoSPAC144.18
GO:0040025 vulval development P
IMP
CelWBGene00005025

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
21721

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC144.18 GI:19115591 Q9UTK8
Saccharomyces cerevisiae (Sce) VRG4
(S000003193)		 GI:6321213 P40107
Kluyveromyces lactis (Kla) KLLA0A01364g GI:50302251
Eremothecium gossypii (Ego) AGOS_AFR236C GI:45198754
Magnaporthe grisea (Mgr) MGG_08858 GI:39953751
Neurospora crassa (Ncr) NCU06198.1 GI:32411145
Arabidopsis thaliana (Ath) GONST1 GI:18397301
Oryza sativa (Osa) Os08g0107400 GI:115474401


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005739 mitochondrion C
IDA
SceS000003193
GO:0005794 Golgi apparatus C
IDA
AthGONST1
SceS000003193
SpoSPAC144.18
GO:0005338 nucleotide-sugar transmembrane transporter
activity		 F
IMP
SceS000003193
ISS
AthGONST1
SceS000003193
SpoSPAC144.18
GO:0005458 GDP-mannose transmembrane transporter
activity		 F
IDA
AthGONST1
GO:0006487 protein amino acid N-linked glycosylation P
IMP
SceS000003193
ISS
SpoSPAC144.18
GO:0015780 nucleotide-sugar transport P
IDA
SceS000003193
IMP
SceS000003193
ISS
SpoSPAC144.18
GO:0015784 GDP-mannose transport P
IGI
AthGONST1
IMP
AthGONST1
GO:0016192 vesicle-mediated transport P
RCA
SceS000003193
GO:0030259 lipid glycosylation P
IMP
SceS000003193
GO:0034219 carbohydrate transmembrane transport P
ISS
SpoSPAC144.18

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_6810

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3428 AFR236C
Arabidopsis thaliana (Ath) ath8247 At2g13650.1
Arabidopsis thaliana (Ath) ath8248 At2g13650.2
Candida glabrata (Cgl) cgl2466 CAGL0H09196g
Cryptococcus neoformans (Cne) cne4253 177.m03009
Cryptococcus neoformans (Cne) cne1374 180.m00322
Debaryomyces hansenii (Dha) dha5647 DEHA0F28182g
Encephalitozoon cuniculi (Ecu) ecu382 19172975
Kluyveromyces lactis (Kla) kla56 KLLA0A01364g
Neurospora crassa (Ncr) ncr6023 NCU06198.2
Oryza sativa (Osa) osa1504 1588.m00140
Rattus norvegicus (Rno) rno12891 ENSRNOP00000050388
(RGD:1309518)
Saccharomyces cerevisiae (Sce) sce2321 YGL225W
(S000003193)
Schizosaccharomyces pombe (Spo) spo3703 SPAC144.18 Q9UTK8
Yarrowia lipolytica (Yli) yli6262 YALI0F21791g