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Search term: YGL238W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CSE1
SGD link S000003207
Alternative ID YGL238W
Description Nuclear envelope protein that mediates the nuclear export of importin alpha (Srp1p), homolog of metazoan CAS protein, required for accurate chromosome segregation
Synonyms YGL238W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG1992 ACDHYPE

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALINGCELLULAR PROCESSES AND SIGNALING Nuclear export receptor CSE1/CAS (importin beta superfamily)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g46520 GI:15226001
Caenorhabditis elegans (Cel) CE27001
(WBGene00002079)		 GI:17510099 Q965V4
Drosophila melanogaster (Dme) 7298347 GI:7298347
Homo sapiens (Hsa) Hs4503073 GI:4503073
Homo sapiens (Hsa) Hs14786256 GI:14786256
Saccharomyces cerevisiae (Sce) YGL238w
(S000003207)		 GI:6321198 P33307
Schizosaccharomyces pombe (Spo) SPBC30B4.05 GI:19112322 O13671
Encephalitozoon cuniculi (Ecu) ECU02g0630 GI:19073983 Q8SWD8


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
ISS
AthAt2g46520
GO:0005635 nuclear envelope C
IDA
SceS000003207
SpoSPBC30B4.05
GO:0005643 nuclear pore C
ISS
AthAt2g46520
TAS
SpoSPBC30B4.05
GO:0005737 cytoplasm C
ISS
AthAt2g46520
GO:0016020 membrane C
IDA
AthAt2g46520
GO:0031965 nuclear membrane C
IDA
SpoSPBC30B4.05
GO:0005525 GTP binding F
NAS
SpoSPBC30B4.05
GO:0008262 importin-alpha export receptor
activity		 F
IGI
SceS000003207
IPI
SceS000003207
ISS
SceS000003207
GO:0008320 protein transmembrane transporter
activity		 F
RCA
SceS000003207
GO:0008565 protein transporter activity F
ISS
AthAt2g46520
TAS
SpoSPBC30B4.05
GO:0022857 transmembrane transporter activity F
RCA
SceS000003207
GO:0022891 substrate-specific transmembrane transporter
activity		 F
RCA
SceS000003207
GO:0000003 reproduction P
IMP
CelWBGene00002079
GO:0000059 protein import into nucleus, docking P
ISS
AthAt2g46520
GO:0002119 nematode larval development P
IMP
CelWBGene00002079
GO:0006417 regulation of translation P
RCA
SceS000003207
GO:0006605 protein targeting P
NAS
SpoSPBC30B4.05
GO:0006606 protein import into nucleus P
RCA
SceS000003207
GO:0006611 protein export from nucleus P
IGI
SceS000003207
IPI
SceS000003207
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00002079
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPBC30B4.05
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00002079
GO:0016246 RNA interference P
IMP
CelWBGene00002079
GO:0034504 protein localization in nucleus P
RCA
SceS000003207
GO:0040007 growth P
IMP
CelWBGene00002079
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00002079
GO:0040011 locomotion P
IMP
CelWBGene00002079
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00002079
GO:0040039 inductive cell migration P
IMP
CelWBGene00002079
GO:0051170 nuclear import P
RCA
SceS000003207
GO:0051301 cell division P
IMP
SpoSPBC30B4.05

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
1006

Species Gene ID NCBI link UniProt link
Homo sapiens (Hsa) CSE1L GI:29029559
Pan troglodytes (Ptr) CSE1L GI:114682541
Canis familiaris (Cfa) CSE1L GI:73992217
Mus musculus (Mmu) Cse1l
(MGI:1339951)		 GI:12963737 Q9CSW8
Rattus norvegicus (Rno) Cse1l GI:34860723
Gallus gallus (Gga) CSE1L GI:118100584
Drosophila melanogaster (Dme) Cas
(FBgn0022213)		 GI:24584736
Anopheles gambiae (Aga) AgaP_AGAP010711 GI:31204951
Schizosaccharomyces pombe (Spo) kap109
(SPBC30B4.05)		 GI:19112322 O13671
Saccharomyces cerevisiae (Sce) CSE1
(S000003207)		 GI:6321198 P33307
Kluyveromyces lactis (Kla) KLLA0A00869g GI:50302207
Eremothecium gossypii (Ego) AGOS_AFR273W GI:45198791
Magnaporthe grisea (Mgr) MGG_03994 GI:145607115
Neurospora crassa (Ncr) NCU04104.1 GI:32405662
Arabidopsis thaliana (Ath) AT2G46520 GI:15226001
Oryza sativa (Osa) Os01g0235400 GI:115435528


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
ISS
AthAt2g46520
NAS
DmeFBgn0022213
GO:0005635 nuclear envelope C
IDA
SceS000003207
SpoSPBC30B4.05
GO:0005643 nuclear pore C
ISS
AthAt2g46520
TAS
SpoSPBC30B4.05
GO:0005737 cytoplasm C
ISS
AthAt2g46520
NAS
DmeFBgn0022213
GO:0016020 membrane C
IDA
AthAt2g46520
GO:0031965 nuclear membrane C
IDA
SpoSPBC30B4.05
GO:0005515 protein binding F
IPI
HsaCSE1L
GO:0005525 GTP binding F
NAS
SpoSPBC30B4.05
GO:0008262 importin-alpha export receptor
activity		 F
IGI
SceS000003207
IPI
SceS000003207
ISS
SceS000003207
NAS
DmeFBgn0022213
GO:0008320 protein transmembrane transporter
activity		 F
RCA
SceS000003207
GO:0008565 protein transporter activity F
ISS
AthAt2g46520
TAS
SpoSPBC30B4.05
GO:0022857 transmembrane transporter activity F
RCA
SceS000003207
GO:0022891 substrate-specific transmembrane transporter
activity		 F
RCA
SceS000003207
GO:0000059 protein import into nucleus, docking P
ISS
AthAt2g46520
GO:0006417 regulation of translation P
RCA
SceS000003207
GO:0006605 protein targeting P
NAS
SpoSPBC30B4.05
GO:0006606 protein import into nucleus P
NAS
DmeFBgn0022213
RCA
SceS000003207
GO:0006611 protein export from nucleus P
IGI
SceS000003207
IMP
DmeFBgn0022213
IPI
SceS000003207
NAS
DmeFBgn0022213
GO:0006911 phagocytosis, engulfment P
IMP
DmeFBgn0022213
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPBC30B4.05
GO:0006915 apoptosis P
ISS
DmeFBgn0022213
TAS
HsaCSE1L
GO:0034504 protein localization in nucleus P
RCA
SceS000003207
GO:0051170 nuclear import P
RCA
SceS000003207
GO:0051301 cell division P
IMP
SpoSPBC30B4.05
GO:0051533 positive regulation of NFAT protein import into
nucleus		 P
IMP
DmeFBgn0022213

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1806

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga7674 ENSANGP00000018477
Ashbya gossypii (Ago) ago3465 AFR273W
Arabidopsis thaliana (Ath) ath6147 At1g68910.1
Arabidopsis thaliana (Ath) ath11894 At2g46520.1
Caenorhabditis elegans (Cel) cel19271 Y48G1A.5
(CE27001;
WBGene00002079)
Candida glabrata (Cgl) cgl2405 CAGL0H07821g
Cryptococcus neoformans (Cne) cne5341 179.m00192
Dictyostelium discoideum (Ddi) ddi10973 DDB0191603
Debaryomyces hansenii (Dha) dha5646 DEHA0F28160g
Drosophila melanogaster (Dme) dme2698 CG13281-PA
(FBgn0022213)
Danio rerio (Dre) dre2341 ENSDARP00000022858
(cse1l)		 Q7SZC2
Takifugu rubripes (Fru) fru1439 SINFRUP00000136811
Gallus gallus (Gga) gga11922 ENSGALP00000007485
Gallus gallus (Gga) gga11923 ENSGALP00000007486
Gallus gallus (Gga) gga11921 ENSGALP00000007487
(CSE1L)
Gallus gallus (Gga) gga11924 ENSGALP00000007488
Homo sapiens (Hsa) hsa20387 ENSP00000262982
(CSE1L)		 P55060-1
Kluyveromyces lactis (Kla) kla34 KLLA0A00869g
Mus musculus (Mmu) mmu16052 ENSMUSP00000002790
(MGI:1339951)		 Q9ERK4
Neurospora crassa (Ncr) ncr3980 NCU04104.2
Oryza sativa (Osa) osa9940 2741.m00152
Oryza sativa (Osa) osa10425 2749.m00166
Oryza sativa (Osa) osa18033 3328.m00109
Plasmodium falciparum (Pfa) pfa4784 PFI1590c
Rattus norvegicus (Rno) rno20306 ENSRNOP00000010210
(RGD:1307536)
Saccharomyces cerevisiae (Sce) sce2335 YGL238W
(S000003207)
Schizosaccharomyces pombe (Spo) spo387 SPBC30B4.05 O13671
Yarrowia lipolytica (Yli) yli4159 YALI0E07139g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
AthAt1g68910
GO:0005634 nucleus C
ISS
AthAt2g46520
NAS
DmeFBgn0022213
GO:0005635 nuclear envelope C
IDA
SceS000003207
SpoSPBC30B4.05
GO:0005643 nuclear pore C
ISS
AthAt2g46520
TAS
SpoSPBC30B4.05
GO:0005737 cytoplasm C
ISS
AthAt2g46520
NAS
DmeFBgn0022213
GO:0016020 membrane C
IDA
AthAt2g46520
GO:0031965 nuclear membrane C
IDA
SpoSPBC30B4.05
GO:0003674 molecular_function F
ND
AthAt1g68910
GO:0005525 GTP binding F
NAS
SpoSPBC30B4.05
GO:0008262 importin-alpha export receptor
activity		 F
IGI
SceS000003207
IPI
SceS000003207
ISS
SceS000003207
NAS
DmeFBgn0022213
GO:0008320 protein transmembrane transporter
activity		 F
RCA
SceS000003207
GO:0008565 protein transporter activity F
ISS
AthAt2g46520
TAS
SpoSPBC30B4.05
GO:0022857 transmembrane transporter activity F
RCA
SceS000003207
GO:0022891 substrate-specific transmembrane transporter
activity		 F
RCA
SceS000003207
GO:0000003 reproduction P
IMP
CelWBGene00002079
GO:0000059 protein import into nucleus, docking P
ISS
AthAt2g46520
GO:0002119 nematode larval development P
IMP
CelWBGene00002079
GO:0006417 regulation of translation P
RCA
SceS000003207
GO:0006605 protein targeting P
NAS
SpoSPBC30B4.05
GO:0006606 protein import into nucleus P
NAS
DmeFBgn0022213
RCA
SceS000003207
GO:0006611 protein export from nucleus P
IGI
SceS000003207
IMP
DmeFBgn0022213
IPI
SceS000003207
NAS
DmeFBgn0022213
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00002079
GO:0006911 phagocytosis, engulfment P
IMP
DmeFBgn0022213
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPBC30B4.05
GO:0006915 apoptosis P
ISS
DmeFBgn0022213
GO:0008150 biological_process P
ND
AthAt1g68910
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00002079
GO:0016246 RNA interference P
IMP
CelWBGene00002079
GO:0034504 protein localization in nucleus P
RCA
SceS000003207
GO:0040007 growth P
IMP
CelWBGene00002079
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00002079
GO:0040011 locomotion P
IMP
CelWBGene00002079
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00002079
GO:0040039 inductive cell migration P
IMP
CelWBGene00002079
GO:0051170 nuclear import P
RCA
SceS000003207
GO:0051301 cell division P
IMP
SpoSPBC30B4.05
GO:0051533 positive regulation of NFAT protein import into
nucleus		 P
IMP
DmeFBgn0022213

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC30B4.05
(O13671)		 YGL238W
(S000003207)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005635 nuclear envelope C
IDA
SceS000003207
SpoSPBC30B4.05
GO:0005643 nuclear pore C
TAS
SpoSPBC30B4.05
GO:0031965 nuclear membrane C
IDA
SpoSPBC30B4.05
GO:0005525 GTP binding F
NAS
SpoSPBC30B4.05
GO:0008262 importin-alpha export receptor
activity		 F
IGI
SceS000003207
IPI
SceS000003207
ISS
SceS000003207
GO:0008320 protein transmembrane transporter
activity		 F
RCA
SceS000003207
GO:0008565 protein transporter activity F
TAS
SpoSPBC30B4.05
GO:0022857 transmembrane transporter activity F
RCA
SceS000003207
GO:0022891 substrate-specific transmembrane transporter
activity		 F
RCA
SceS000003207
GO:0006417 regulation of translation P
RCA
SceS000003207
GO:0006605 protein targeting P
NAS
SpoSPBC30B4.05
GO:0006606 protein import into nucleus P
RCA
SceS000003207
GO:0006611 protein export from nucleus P
IGI
SceS000003207
IPI
SceS000003207
GO:0006913 nucleocytoplasmic transport P
TAS
SpoSPBC30B4.05
GO:0034504 protein localization in nucleus P
RCA
SceS000003207
GO:0051170 nuclear import P
RCA
SceS000003207
GO:0051301 cell division P
IMP
SpoSPBC30B4.05

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s.khadayate@ucl.ac.uk