Search term: YGL244W

Gene summary:

KOG results:

KOG name	Phylogenetic pattern (and link to KOGs with this pattern)
KOG2402	ACDHYPE

KOGs classification	KOGs description
INFORMATION STORAGE AND PROCESSING	Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein)

Species	KOG link	NCBI link	UniProt link
Arabidopsis thaliana (Ath)	At1g61040	GI:15219855
Caenorhabditis elegans (Cel)	CE09619 (WBGene00009103)	GI:17560116	P90845
Drosophila melanogaster (Dme)	7290368	GI:20128961
Drosophila melanogaster (Dme)	7291410 (Rtf1)	GI:20130239	Q9W261
Homo sapiens (Hsa)	Hs14749361	GI:14749361
Homo sapiens (Hsa)	Hs22065291	GI:22065291
Saccharomyces cerevisiae (Sce)	YGL244w (S000003213)	GI:6321193	P53064
Schizosaccharomyces pombe (Spo)	SPBC651.09c	GI:19112299	O94667
Encephalitozoon cuniculi (Ecu)	ECU02g0360	GI:19073957	Q8SWF3

GO terms for KOG results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005634	nucleus	C	IDA Dme Rtf1 Sce S000003213 Spo SPBC651.09c
GO:0008023	transcription elongation factor complex	C	IPI Sce S000003213
GO:0016593	Cdc73/Paf1 complex	C	IPI Sce S000003213 ISS Spo SPBC651.09c
GO:0016944	RNA polymerase II transcription elongation factor activity	F	IPI Sce S000003213
GO:0042800	histone methyltransferase activity (H3-K4 specific)	F	IMP Dme Rtf1
GO:0000003	reproduction	P	IMP Cel WBGene00009103
GO:0002119	nematode larval development	P	IMP Cel WBGene00009103
GO:0006366	transcription from RNA polymerase II promoter	P	IMP Sce S000003213
GO:0006368	RNA elongation from RNA polymerase II promoter	P	IPI Sce S000003213 ISS Spo SPBC651.09c
GO:0006730	one-carbon metabolic process	P	RCA Sce S000003213
GO:0006898	receptor-mediated endocytosis	P	IMP Cel WBGene00009103
GO:0007219	Notch signaling pathway	P	IMP Dme Rtf1
GO:0009792	embryo development ending in birth or egg hatching	P	IMP Cel WBGene00009103
GO:0009910	negative regulation of flower development	P	IMP Ath At1g61040
GO:0010171	body morphogenesis	P	IMP Cel WBGene00009103
GO:0010390	histone monoubiquitination	P	IMP Sce S000003213
GO:0016571	histone methylation	P	IMP Sce S000003213 ISS Spo SPBC651.09c
GO:0016574	histone ubiquitination	P	ISS Spo SPBC651.09c
GO:0040007	growth	P	IMP Cel WBGene00009103
GO:0040010	positive regulation of growth rate	P	IMP Cel WBGene00009103
GO:0040011	locomotion	P	IMP Cel WBGene00009103
GO:0040035	hermaphrodite genitalia development	P	IMP Cel WBGene00009103
GO:0045747	positive regulation of Notch signaling pathway	P	IGI Dme Rtf1
GO:0045893	positive regulation of transcription, DNA-dependent	P	IMP Ath At1g61040
GO:0045941	positive regulation of transcription	P	RCA Sce S000003213
GO:0051568	histone H3-K4 methylation	P	IMP Dme Rtf1
GO:0051571	positive regulation of histone H3-K4 methylation	P	IMP Dme Rtf1

HomoloGene results:

HomoloGene cluster	Phylogenetic pattern
5871

Species	Gene ID	NCBI link	UniProt link
Homo sapiens (Hsa)	RTF1	GI:195976782
Pan troglodytes (Ptr)	RTF1	GI:114656497
Canis familiaris (Cfa)	RTF1	GI:73999803
Mus musculus (Mmu)	Rtf1 (MGI:1309480)	GI:149250063	O88381
Rattus norvegicus (Rno)	Rtf1	GI:109468683
Gallus gallus (Gga)	RTF1	GI:118091596
Drosophila melanogaster (Dme)	Rtf1	GI:20130239	Q9W261
Anopheles gambiae (Aga)	AgaP_AGAP012057	GI:158300586
Caenorhabditis elegans (Cel)	F25B3.6 (CE09619; WBGene00009103)	GI:17560116	P90845
Schizosaccharomyces pombe (Spo)	SPBC651.09c	GI:19112299	O94667
Saccharomyces cerevisiae (Sce)	RTF1 (S000003213)	GI:6321193	P53064
Kluyveromyces lactis (Kla)	KLLA0A00737g	GI:50302195
Eremothecium gossypii (Ego)	AGOS_AFR266W	GI:45198784
Magnaporthe grisea (Mgr)	MGG_00958	GI:145610699
Neurospora crassa (Ncr)	NCU03956.1	GI:32405324
Arabidopsis thaliana (Ath)	VIP5	GI:15219855
Oryza sativa (Osa)	Os12g0535900	GI:115488898

GO terms for Homologene results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0005634	nucleus	C	IDA Dme Rtf1 Sce S000003213 Spo SPBC651.09c
GO:0005730	nucleolus	C	IDA Mmu MGI:1309480
GO:0008023	transcription elongation factor complex	C	IPI Sce S000003213
GO:0016593	Cdc73/Paf1 complex	C	IPI Sce S000003213 ISS Spo SPBC651.09c
GO:0003674	molecular_function	F	ND Mmu MGI:1309480
GO:0016944	RNA polymerase II transcription elongation factor activity	F	IPI Sce S000003213
GO:0042800	histone methyltransferase activity (H3-K4 specific)	F	IMP Dme Rtf1
GO:0000003	reproduction	P	IMP Cel WBGene00009103
GO:0002119	nematode larval development	P	IMP Cel WBGene00009103
GO:0006366	transcription from RNA polymerase II promoter	P	IMP Sce S000003213
GO:0006368	RNA elongation from RNA polymerase II promoter	P	IPI Sce S000003213 ISS Spo SPBC651.09c
GO:0006730	one-carbon metabolic process	P	RCA Sce S000003213
GO:0006898	receptor-mediated endocytosis	P	IMP Cel WBGene00009103
GO:0007219	Notch signaling pathway	P	IMP Dme Rtf1
GO:0008150	biological_process	P	ND Mmu MGI:1309480
GO:0009792	embryo development ending in birth or egg hatching	P	IMP Cel WBGene00009103
GO:0009910	negative regulation of flower development	P	IMP Ath VIP5
GO:0010171	body morphogenesis	P	IMP Cel WBGene00009103
GO:0010390	histone monoubiquitination	P	IMP Sce S000003213
GO:0016571	histone methylation	P	IMP Sce S000003213 ISS Spo SPBC651.09c
GO:0016574	histone ubiquitination	P	ISS Spo SPBC651.09c
GO:0040007	growth	P	IMP Cel WBGene00009103
GO:0040010	positive regulation of growth rate	P	IMP Cel WBGene00009103
GO:0040011	locomotion	P	IMP Cel WBGene00009103
GO:0040035	hermaphrodite genitalia development	P	IMP Cel WBGene00009103
GO:0045747	positive regulation of Notch signaling pathway	P	IGI Dme Rtf1
GO:0045893	positive regulation of transcription, DNA-dependent	P	IMP Ath VIP5
GO:0045941	positive regulation of transcription	P	RCA Sce S000003213
GO:0051568	histone H3-K4 methylation	P	IMP Dme Rtf1
GO:0051571	positive regulation of histone H3-K4 methylation	P	IMP Dme Rtf1