Search term: YGR003W

Gene summary:

KOG results:

KOG name	Phylogenetic pattern (and link to KOGs with this pattern)
KOG2166	ACDHYPE

KOGs classification	KOGs description
CELLULAR PROCESSES AND SIGNALING	Cullins

Species	KOG link	NCBI link	UniProt link
Arabidopsis thaliana (Ath)	At1g02980	GI:15218668
Arabidopsis thaliana (Ath)	At1g26830	GI:15223361
Arabidopsis thaliana (Ath)	At1g43140	GI:15218273
Arabidopsis thaliana (Ath)	At1g59790	GI:15218911
Arabidopsis thaliana (Ath)	At1g59800	GI:15218925
Arabidopsis thaliana (Ath)	At1g69670	GI:15222412
Arabidopsis thaliana (Ath)	At4g02570	GI:7484879
Caenorhabditis elegans (Cel)	CE11928 (WBGene00000841)	GI:17539492	Q21346
Caenorhabditis elegans (Cel)	CE27593 (WBGene00000838)	GI:17566422	Q17391
Caenorhabditis elegans (Cel)	CE29089 (WBGene00000836)	GI:17552768	Q17389
Drosophila melanogaster (Dme)	7294516	GI:7294516
Drosophila melanogaster (Dme)	7298217 (FBgn0001980)	GI:17737421
Drosophila melanogaster (Dme)	7304137 (FBgn0015509)	GI:17647593
Homo sapiens (Hsa)	Hs22049312	GI:22049312
Homo sapiens (Hsa)	Hs22055673	GI:22055673
Homo sapiens (Hsa)	Hs4503161	GI:4503161
Homo sapiens (Hsa)	Hs4503165 (CUL3)	GI:4503165	Q13618
Saccharomyces cerevisiae (Sce)	YDL132w (S000002290)	GI:6320070	Q12018
Saccharomyces cerevisiae (Sce)	YGR003w (S000003235)	GI:6321440	P53202
Saccharomyces cerevisiae (Sce)	YJL047c (S000003583)	GI:6322414	P47050
Schizosaccharomyces pombe (Spo)	SPAC17G6.12	GI:19115171	O13790
Schizosaccharomyces pombe (Spo)	SPAC24H6.03	GI:19113861	Q09760
Encephalitozoon cuniculi (Ecu)	ECU06g0880	GI:19074338	Q8SRQ4
Encephalitozoon cuniculi (Ecu)	ECU07g0860	GI:19074508	Q8SRJ4

GO terms for KOG results:

GO ID	GO term	GO aspect	Evidence codes and associations
GO:0000151	ubiquitin ligase complex	C	IPI Ath At4g02570 RCA Sce S000003583 TAS Ath At1g26830 At1g69670
GO:0000152	nuclear ubiquitin ligase complex	C	ISS Dme FBgn0015509
GO:0000794	condensed nuclear chromosome	C	IDA Ath At4g02570
GO:0005634	nucleus	C	IDA Ath At4g02570 Sce S000003235 S000003583
GO:0005737	cytoplasm	C	IDA Ath At4g02570 Sce S000003235 S000003583
GO:0005819	spindle	C	IDA Ath At4g02570
GO:0005827	polar microtubule	C	IDA Hsa CUL3
GO:0005829	cytosol	C	IDA Spo SPAC17G6.12 SPAC24H6.03
GO:0009524	phragmoplast	C	IDA Ath At4g02570
GO:0009941	chloroplast envelope	C	IDA Ath At1g02980
GO:0019005	SCF ubiquitin ligase complex	C	IDA Sce S000002290 Spo SPAC17G6.12 IPI Sce S000002290 ISS Ath At1g02980 Spo SPAC24H6.03 NAS Dme FBgn0015509
GO:0031463	Cul3-RING ubiquitin ligase complex	C	IDA Hsa CUL3 Sce S000003235 IMP Sce S000003235
GO:0035361	Cul8-RING ubiquitin ligase complex	C	IDA Sce S000003583
GO:0003688	DNA replication origin binding	F	IPI Sce S000002290
GO:0004842	ubiquitin-protein ligase activity	F	IDA Hsa CUL3 Sce S000002290 S000003235 S000003583 ISS Ath At1g69670 At1g26830
GO:0005515	protein binding	F	IPI Ath At4g02570 At1g69670 At1g26830 Cel WBGene00000838 Hsa CUL3 Sce S000003235 S000003583
GO:0030674	protein binding, bridging	F	IMP Sce S000002290 IPI Sce S000002290
GO:0000003	reproduction	P	IMP Cel WBGene00000836
GO:0000082	G1/S transition of mitotic cell cycle	P	IMP Sce S000002290 TAS Hsa CUL3
GO:0000086	G2/M transition of mitotic cell cycle	P	IGI Sce S000002290
GO:0000090	mitotic anaphase	P	IMP Hsa CUL3
GO:0000910	cytokinesis	P	IMP Hsa CUL3
GO:0002119	nematode larval development	P	IMP Cel WBGene00000836
GO:0006508	proteolysis	P	RCA Sce S000002290
GO:0006511	ubiquitin-dependent protein catabolic process	P	IC Sce S000003235 S000003583 ISS Sce S000003235 TAS Ath At1g26830 At1g69670
GO:0006898	receptor-mediated endocytosis	P	IMP Cel WBGene00000836
GO:0006974	response to DNA damage stimulus	P	IMP Cel WBGene00000841 WBGene00000836
GO:0007049	cell cycle	P	ISS Ath At1g69670 At1g26830 At1g02980 At4g02570
GO:0007050	cell cycle arrest	P	TAS Hsa CUL3
GO:0007067	mitosis	P	IMP Cel WBGene00000836
GO:0007088	regulation of mitosis	P	IMP Sce S000003583
GO:0007346	regulation of mitotic cell cycle	P	IC Spo SPAC17G6.12 SPAC24H6.03
GO:0008054	cyclin catabolic process	P	IDA Hsa CUL3
GO:0008284	positive regulation of cell proliferation	P	TAS Hsa CUL3
GO:0008285	negative regulation of cell proliferation	P	IMP Cel WBGene00000836
GO:0008340	determination of adult lifespan	P	IMP Cel WBGene00000841 WBGene00000838 WBGene00000836
GO:0008361	regulation of cell size	P	IMP Cel WBGene00000836
GO:0008629	induction of apoptosis by intracellular signals	P	TAS Hsa CUL3
GO:0009639	response to red or far red light	P	IMP Ath At1g26830
GO:0009733	response to auxin stimulus	P	IMP Ath At4g02570
GO:0009753	response to jasmonic acid stimulus	P	IMP Ath At4g02570
GO:0009792	embryo development ending in birth or egg hatching	P	IMP Cel WBGene00000841 WBGene00000836 WBGene00000838
GO:0009793	embryo development ending in seed dormancy	P	IGI Ath At1g69670 At1g26830 IMP Ath At4g02570
GO:0009867	jasmonic acid mediated signaling pathway	P	TAS Ath At4g02570
GO:0009911	positive regulation of flower development	P	IMP Ath At1g26830
GO:0009960	endosperm development	P	IGI Ath At1g26830 At1g69670
GO:0010265	SCF complex assembly	P	IPI Ath At4g02570
GO:0010526	negative regulation of transposition, RNA-mediated	P	IMP Sce S000003583
GO:0016477	cell migration	P	IMP Hsa CUL3
GO:0016567	protein ubiquitination	P	IDA Hsa CUL3
GO:0031146	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	P	IDA Sce S000002290
GO:0031297	replication fork processing	P	IMP Sce S000003583
GO:0032876	negative regulation of DNA endoreduplication	P	IMP Spo SPAC17G6.12
GO:0035024	negative regulation of Rho protein signal transduction	P	IMP Hsa CUL3
GO:0035046	pronuclear migration	P	IMP Cel WBGene00000838
GO:0040007	growth	P	IMP Cel WBGene00000841 WBGene00000836
GO:0040010	positive regulation of growth rate	P	IMP Cel WBGene00000841
GO:0040015	negative regulation of multicellular organism growth	P	IMP Cel WBGene00000836
GO:0040025	vulval development	P	IMP Cel WBGene00000836
GO:0042752	regulation of circadian rhythm	P	IMP Ath At4g02570
GO:0042787	protein ubiquitination involved in ubiquitin-dependent protein catabolic process	P	IC Spo SPAC17G6.12 SPAC24H6.03 IDA Sce S000002290 IMP Sce S000003235
GO:0043066	negative regulation of apoptosis	P	IMP Cel WBGene00000836
GO:0043149	stress fiber assembly	P	IMP Hsa CUL3
GO:0043161	proteasomal ubiquitin-dependent protein catabolic process	P	IDA Hsa CUL3
GO:0044254	multicellular organismal protein catabolic process	P	IMP Cel WBGene00000838
GO:0045930	negative regulation of mitotic cell cycle	P	IMP Cel WBGene00000836
GO:0050790	regulation of catalytic activity	P	RCA Sce S000002290
GO:0051049	regulation of transport	P	RCA Sce S000002290
GO:0051301	cell division	P	IMP Cel WBGene00000836
GO:0051322	anaphase	P	IMP Hsa CUL3
GO:0070651	nonfunctional rRNA decay	P	IMP Sce S000003583

HomoloGene results:

HomoloGene cluster	Phylogenetic pattern
68708

Species	Gene ID	NCBI link	UniProt link
Saccharomyces cerevisiae (Sce)	CUL3 (S000003235)	GI:6321440	P53202
Kluyveromyces lactis (Kla)	KLLA0C18282g	GI:50306105
Eremothecium gossypii (Ego)	AGOS_AFR498W	GI:45199016