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Search term: YGR100W


Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name MDR1
SGD link S000003332
Alternative ID YGR100W
Description Cytoplasmic GTPase-activating protein for Ypt/Rab transport GTPases Ypt6p, Ypt31p and Sec4p; involved in recycling of internalized proteins and regulation of Golgi secretory function
Synonyms YGR100W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:


KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4347 -CDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED GTPase-activating protein VRP

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE18397 GI:17543430
Caenorhabditis elegans (Cel) CE19171 GI:17543432
Drosophila melanogaster (Dme) 7296423 GI:7296423
Homo sapiens (Hsa) Hs8923279 GI:8923279
Homo sapiens (Hsa) Hs17485595 GI:17485595
Homo sapiens (Hsa) Hs20533400 GI:20533400
Homo sapiens (Hsa) Hs22042713 GI:22042713
Homo sapiens (Hsa) Hs13027584 GI:13027584
Homo sapiens (Hsa) Hs5902154 GI:5902154
Saccharomyces cerevisiae (Sce) YGR100w
(S000003332)
GI:6321537 P53258
Schizosaccharomyces pombe (Spo) SPBC215.01 GI:19113470 O43048
Schizosaccharomyces pombe (Spo) SPCC1259.11c GI:19075567 O94711


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
TAS
SceS000003332
GO:0005634 nucleus C
IDA
SpoSPCC1259.11c
GO:0005737 cytoplasm C
IDA
SceS000003332
GO:0005829 cytosol C
IDA
SpoSPCC1259.11c
SPBC215.01
GO:0032153 cell division site C
IDA
SpoSPBC215.01
GO:0005097 Rab GTPase activator activity F
IDA
SceS000003332
ISS
SceS000003332
SpoSPBC215.01
SPCC1259.11c
GO:0005509 calcium ion binding F
ISS
SpoSPBC215.01
GO:0006886 intracellular protein transport P
IGI
SceS000003332
GO:0016192 vesicle-mediated transport P
NAS
SpoSPBC215.01
SPCC1259.11c
GO:0032313 regulation of Rab GTPase activity P
ISS
SpoSPCC1259.11c
SPBC215.01

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
5983

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPBC215.01 GI:19113470 O43048
Saccharomyces cerevisiae (Sce) MDR1
(S000003332)
GI:6321537 P53258
Kluyveromyces lactis (Kla) KLLA0D15202g GI:50307511
Eremothecium gossypii (Ego) AGOS_AAR091W GI:45184914
Magnaporthe grisea (Mgr) MGG_02833 GI:39970733
Neurospora crassa (Ncr) NCU00681.1 GI:32408761


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
TAS
SceS000003332
GO:0005737 cytoplasm C
IDA
SceS000003332
GO:0005829 cytosol C
IDA
SpoSPBC215.01
GO:0032153 cell division site C
IDA
SpoSPBC215.01
GO:0005097 Rab GTPase activator activity F
IDA
SceS000003332
ISS
SceS000003332
SpoSPBC215.01
GO:0005509 calcium ion binding F
ISS
SpoSPBC215.01
GO:0006886 intracellular protein transport P
IGI
SceS000003332
GO:0016192 vesicle-mediated transport P
NAS
SpoSPBC215.01
GO:0032313 regulation of Rab GTPase activity P
ISS
SpoSPBC215.01

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_580

Species OrthoMCL
sequence
Model organism
protein page
UniProt link
Anopheles gambiae (Aga) aga1582 ENSANGP00000020379
Ashbya gossypii (Ago) ago277 AAR091W
Arabidopsis thaliana (Ath) ath10812 At2g37290.1
Caenorhabditis elegans (Cel) cel18896 Y45F10A.6a
(CE40583;
WBGene00012868)
Caenorhabditis elegans (Cel) cel18897 Y45F10A.6b
(CE40584)
Candida glabrata (Cgl) cgl1961 CAGL0G07777g
Cryptococcus neoformans (Cne) cne3910 185.m02497
Dictyostelium discoideum (Ddi) ddi3911 DDB0217659
Debaryomyces hansenii (Dha) dha1794 DEHA0C08283g
Drosophila melanogaster (Dme) dme10566 CG7324-PA
(FBgn0037074)
Danio rerio (Dre) dre1188 ENSDARP00000029379
Danio rerio (Dre) dre1183 ENSDARP00000033481
Danio rerio (Dre) dre1184 ENSDARP00000037511
Danio rerio (Dre) dre1182 ENSDARP00000040402
Danio rerio (Dre) dre1185 ENSDARP00000043384
Danio rerio (Dre) dre1187 ENSDARP00000046390
Danio rerio (Dre) dre1186 ENSDARP00000048024
Takifugu rubripes (Fru) fru32780 SINFRUP00000155533
Takifugu rubripes (Fru) fru32781 SINFRUP00000155534
Takifugu rubripes (Fru) fru32779 SINFRUP00000155535
Takifugu rubripes (Fru) fru15675 SINFRUP00000162254
Takifugu rubripes (Fru) fru32783 SINFRUP00000166136
Takifugu rubripes (Fru) fru15676 SINFRUP00000168176
Takifugu rubripes (Fru) fru15677 SINFRUP00000168242
Takifugu rubripes (Fru) fru32777 SINFRUP00000169240
Takifugu rubripes (Fru) fru32782 SINFRUP00000169270
Takifugu rubripes (Fru) fru15678 SINFRUP00000172345
Takifugu rubripes (Fru) fru15674 SINFRUP00000174583
Takifugu rubripes (Fru) fru32778 SINFRUP00000176580
Gallus gallus (Gga) gga5936 ENSGALP00000009396
(TBC1D9B)
Gallus gallus (Gga) gga5940 ENSGALP00000009397
Gallus gallus (Gga) gga5937 ENSGALP00000009398
Gallus gallus (Gga) gga5938 ENSGALP00000009399
Gallus gallus (Gga) gga5941 ENSGALP00000009400
Gallus gallus (Gga) gga5935 ENSGALP00000009401
Gallus gallus (Gga) gga17320 ENSGALP00000016001
Gallus gallus (Gga) gga17314 ENSGALP00000016002
Gallus gallus (Gga) gga17315 ENSGALP00000016003
Gallus gallus (Gga) gga17316 ENSGALP00000016004
Gallus gallus (Gga) gga17317 ENSGALP00000016005
(TBC1D9)
Gallus gallus (Gga) gga17318 ENSGALP00000016006
Gallus gallus (Gga) gga17319 ENSGALP00000016007
Homo sapiens (Hsa) hsa24675 ENSP00000262996
(TBC1D9)
Homo sapiens (Hsa) hsa26305 ENSP00000347375
(TBC1D9B)
Q66K14-2
Homo sapiens (Hsa) hsa26306 ENSP00000349291
(TBC1D9B)
Q66K14-1
Kluyveromyces lactis (Kla) kla2734 KLLA0D15202g
Mus musculus (Mmu) mmu26271 ENSMUSP00000034145
(MGI:1918560)
Q3UYK3-2
Mus musculus (Mmu) mmu3562 ENSMUSP00000043824
Neurospora crassa (Ncr) ncr659 NCU00681.2
Rattus norvegicus (Rno) rno14817 ENSRNOP00000004093
(RGD:1308221)
Rattus norvegicus (Rno) rno14816 ENSRNOP00000004749
(RGD:1308221)
Rattus norvegicus (Rno) rno4893 ENSRNOP00000036618
(RGD:1310147)
Rattus norvegicus (Rno) rno4892 ENSRNOP00000047447
(RGD:1310147)
B2GV11
Saccharomyces cerevisiae (Sce) sce2468 YGR100W
(S000003332)
Schizosaccharomyces pombe (Spo) spo1010 SPBC215.01 O43048
Schizosaccharomyces pombe (Spo) spo2298 SPCC1259.11c O94711
Yarrowia lipolytica (Yli) yli812 YALI0B01628g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005575 cellular_component C
ND
MmuMGI:1918560
GO:0005625 soluble fraction C
TAS
SceS000003332
GO:0005634 nucleus C
IDA
SpoSPCC1259.11c
GO:0005737 cytoplasm C
IDA
SceS000003332
GO:0005829 cytosol C
IDA
SpoSPCC1259.11c
SPBC215.01
GO:0009507 chloroplast C
IDA
AthAt2g37290
GO:0032153 cell division site C
IDA
SpoSPBC215.01
GO:0003674 molecular_function F
ND
MmuMGI:1918560
GO:0005097 Rab GTPase activator activity F
IDA
SceS000003332
ISS
DmeFBgn0037074
SceS000003332
SpoSPBC215.01
SPCC1259.11c
GO:0005509 calcium ion binding F
ISS
SpoSPBC215.01
GO:0006886 intracellular protein transport P
IGI
SceS000003332
GO:0008150 biological_process P
ND
MmuMGI:1918560
GO:0016192 vesicle-mediated transport P
NAS
SpoSPBC215.01
SPCC1259.11c
GO:0032313 regulation of Rab GTPase activity P
ISS
SpoSPCC1259.11c
SPBC215.01

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Curated yeast ortholog results:

S. pombe
systematic ID
S. cerevisiae
systematic ID
SPCC1259.11c
(O94711)
YGR100W
(S000003332)
SPBC215.01
(O43048)
YGR100W
(S000003332)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005625 soluble fraction C
TAS
SceS000003332
GO:0005634 nucleus C
IDA
SpoSPCC1259.11c
GO:0005737 cytoplasm C
IDA
SceS000003332
GO:0005829 cytosol C
IDA
SpoSPCC1259.11c
SPBC215.01
GO:0032153 cell division site C
IDA
SpoSPBC215.01
GO:0005097 Rab GTPase activator activity F
IDA
SceS000003332
ISS
SceS000003332
SpoSPBC215.01
SPCC1259.11c
GO:0005509 calcium ion binding F
ISS
SpoSPBC215.01
GO:0006886 intracellular protein transport P
IGI
SceS000003332
GO:0016192 vesicle-mediated transport P
NAS
SpoSPBC215.01
SPCC1259.11c
GO:0032313 regulation of Rab GTPase activity P
ISS
SpoSPCC1259.11c
SPBC215.01

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Search for gene by ID or name:

Query species:

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Search for GO info:  

GO info in one table:

s.khadayate@ucl.ac.uk