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Search term: YGR104C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SRB5
SGD link S000003336
Alternative ID YGR104C
Description Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; involved in telomere maintenance
Synonyms YGR104C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39118

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) SRB5
(S000003336)		 GI:6321541
Kluyveromyces lactis (Kla) KLLA0D15290g GI:50307519
Eremothecium gossypii (Ego) AGOS_AAR095C GI:45184918


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0016592 mediator complex C
IDA
SceS000003336
GO:0016455 RNA polymerase II transcription mediator
activity		 F
IDA
SceS000003336
GO:0006366 transcription from RNA polymerase II
promoter		 P
IDA
SceS000003336
RCA
SceS000003336

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_17635

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago281 AAR095C
Candida glabrata (Cgl) cgl1965 CAGL0G07865g
Debaryomyces hansenii (Dha) dha765 DEHA0B01914g
Kluyveromyces lactis (Kla) kla2738 KLLA0D15290g
Saccharomyces cerevisiae (Sce) sce2472 YGR104C
(S000003336)
Schizosaccharomyces pombe (Spo) spo3474 SPAC5D6.05 O14198
Yarrowia lipolytica (Yli) yli1716 YALI0B23320g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC5D6.05
GO:0005829 cytosol C
IDA
SpoSPAC5D6.05
GO:0016592 mediator complex C
IDA
SceS000003336
SpoSPAC5D6.05
NAS
SpoSPAC5D6.05
GO:0005515 protein binding F
IPI
SpoSPAC5D6.05
GO:0016455 RNA polymerase II transcription mediator
activity		 F
IDA
SceS000003336
GO:0006366 transcription from RNA polymerase II
promoter		 P
IDA
SceS000003336
RCA
SceS000003336
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IC
SpoSPAC5D6.05

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC5D6.05
(O14198)		 YGR104C
(S000003336)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPAC5D6.05
GO:0005829 cytosol C
IDA
SpoSPAC5D6.05
GO:0016592 mediator complex C
IDA
SceS000003336
SpoSPAC5D6.05
NAS
SpoSPAC5D6.05
GO:0005515 protein binding F
IPI
SpoSPAC5D6.05
GO:0016455 RNA polymerase II transcription mediator
activity		 F
IDA
SceS000003336
GO:0006366 transcription from RNA polymerase II
promoter		 P
IDA
SceS000003336
RCA
SceS000003336
GO:0032569 gene-specific transcription from RNA polymerase II
promoter		 P
IC
SpoSPAC5D6.05

Back to the top
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