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Search term: YGR143W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name SKN1
SGD link S000003375
Alternative ID YGR143W
Description Protein involved in sphingolipid biosynthesis; type II membrane protein with similarity to Kre6p
Synonyms YGR143W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
40554

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC17G6.11c GI:19115170 O13789
Schizosaccharomyces pombe (Spo) SPAC23H3.11c GI:19114713 O13941
Saccharomyces cerevisiae (Sce) SKN1
(S000003375)		 GI:6321582
Saccharomyces cerevisiae (Sce) KRE6
(S000006363)		 GI:6325417
Kluyveromyces lactis (Kla) KLLA0E03597g GI:50308221
Eremothecium gossypii (Ego) AGOS_AFR545W GI:45199063


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000137 Golgi cis cisterna C
IDA
SceS000006363
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0016021 integral to membrane C
IDA
SceS000006363
S000003375
ISS
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0030176 integral to endoplasmic reticulum
membrane		 C
IDA
SceS000006363
GO:0015926 glucosidase activity F
IMP
SceS000006363
S000003375
ISS
SceS000006363
S000003375
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0006078 1,6-beta-glucan biosynthetic process P
IMP
SceS000006363
S000003375
ISS
SceS000006363
S000003375
SpoSPAC17G6.11c
SPAC23H3.11c
GO:0007047 cellular cell wall organization P
ISS
SpoSPAC17G6.11c
SPAC23H3.11c
RCA
SceS000006363
GO:0030148 sphingolipid biosynthetic process P
IGI
SceS000003375
IMP
SceS000003375
GO:0031505 fungal-type cell wall organization P
IMP
SceS000006363
S000003375

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_4321

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago3737 AFR545W
Candida glabrata (Cgl) cgl1441 CAGL0F04873g
Candida glabrata (Cgl) cgl2954 CAGL0I10054g
Cryptococcus neoformans (Cne) cne745 163.m03795
Cryptococcus neoformans (Cne) cne752 163.m03817
Cryptococcus neoformans (Cne) cne932 163.m06376
Cryptococcus neoformans (Cne) cne953 163.m06415
Cryptococcus neoformans (Cne) cne1676 164.m02008
Cryptococcus neoformans (Cne) cne1381 180.m00329
Debaryomyces hansenii (Dha) dha1293 DEHA0B14080g
Debaryomyces hansenii (Dha) dha1294 DEHA0B14102g
Debaryomyces hansenii (Dha) dha1298 DEHA0B14201g
Debaryomyces hansenii (Dha) dha1299 DEHA0B14223g
Debaryomyces hansenii (Dha) dha1300 DEHA0B14239
Kluyveromyces lactis (Kla) kla3110 KLLA0E03597g
Saccharomyces cerevisiae (Sce) sce2515 YGR143W
(S000003375)
Saccharomyces cerevisiae (Sce) sce6623 YPR159W
(S000006363)
Schizosaccharomyces pombe (Spo) spo3856 SPAC17G6.11c O13789
Schizosaccharomyces pombe (Spo) spo2393 SPAC23H3.11c O13941
Yarrowia lipolytica (Yli) yli1794 YALI0C01650g
Yarrowia lipolytica (Yli) yli2291 YALI0C14190g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000137 Golgi cis cisterna C
IDA
SceS000006363
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0016021 integral to membrane C
IDA
SceS000006363
S000003375
ISS
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0030176 integral to endoplasmic reticulum
membrane		 C
IDA
SceS000006363
GO:0015926 glucosidase activity F
IMP
SceS000006363
S000003375
ISS
SceS000006363
S000003375
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0006078 1,6-beta-glucan biosynthetic process P
IMP
SceS000006363
S000003375
ISS
SceS000006363
S000003375
SpoSPAC17G6.11c
SPAC23H3.11c
GO:0007047 cellular cell wall organization P
ISS
SpoSPAC17G6.11c
SPAC23H3.11c
RCA
SceS000006363
GO:0030148 sphingolipid biosynthetic process P
IGI
SceS000003375
IMP
SceS000003375
GO:0031505 fungal-type cell wall organization P
IMP
SceS000006363
S000003375

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC23H3.11c
(O13941)		 YGR143W
(S000003375)
SPAC17G6.11c
(O13789)		 YGR143W
(S000003375)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005783 endoplasmic reticulum C
IDA
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0016021 integral to membrane C
IDA
SceS000003375
ISS
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0015926 glucosidase activity F
IMP
SceS000003375
ISS
SceS000003375
SpoSPAC23H3.11c
SPAC17G6.11c
GO:0006078 1,6-beta-glucan biosynthetic process P
IMP
SceS000003375
ISS
SceS000003375
SpoSPAC17G6.11c
SPAC23H3.11c
GO:0007047 cellular cell wall organization P
ISS
SpoSPAC17G6.11c
SPAC23H3.11c
GO:0030148 sphingolipid biosynthetic process P
IGI
SceS000003375
IMP
SceS000003375
GO:0031505 fungal-type cell wall organization P
IMP
SceS000003375

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