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Search term: YGR167W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name CLC1
SGD link S000003399
Alternative ID YGR167W
Description Clathrin light chain, subunit of the major coat protein involved in intracellular protein transport and endocytosis; thought to regulate clathrin function; two Clathrin heavy chains (CHC1) form the clathrin triskelion structural component
Synonyms YGR167W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG4031 -CDHYP-

KOGs classification KOGs description
CELLULAR PROCESSES AND SIGNALING Vesicle coat protein clathrin, light chain

Species KOG link NCBI link UniProt link
Caenorhabditis elegans (Cel) CE13219
(WBGene00020246)		 GI:17563878 P90961
Drosophila melanogaster (Dme) 7293677 GI:7293677
Homo sapiens (Hsa) Hs6005993 GI:6005993 P09496
Homo sapiens (Hsa) Hs6005995
(CLTB)		 GI:6005995 P09497
Homo sapiens (Hsa) Hs4502899
(CLTA)		 GI:4502899 P09496
Homo sapiens (Hsa) Hs4502901 GI:4502901 P09497
Saccharomyces cerevisiae (Sce) YGR167w
(S000003399)		 GI:6321606 P17891
Schizosaccharomyces pombe (Spo) SPBC9B6.08 GI:19112542 Q9USP6


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC9B6.08
GO:0005794 Golgi apparatus C
IDA
SpoSPBC9B6.08
RCA
SceS000003399
GO:0030118 clathrin coat C
ISS
HsaCLTB
NAS
HsaCLTB
GO:0030125 clathrin vesicle coat C
ISS
SpoSPBC9B6.08
TAS
SceS000003399
GO:0044431 Golgi apparatus part C
RCA
SceS000003399
GO:0003674 molecular_function F
ND
SpoSPBC9B6.08
GO:0005198 structural molecule activity F
TAS
SceS000003399
GO:0005515 protein binding F
IPI
HsaCLTB
GO:0006886 intracellular protein transport P
NAS
HsaCLTB
SpoSPBC9B6.08
GO:0006897 endocytosis P
IDA
SceS000003399
IMP
SceS000003399
IPI
SceS000003399
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00020246
GO:0016192 vesicle-mediated transport P
ISS
SpoSPBC9B6.08
TAS
SceS000003399

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39144

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) clc1
(SPBC9B6.08)		 GI:19112542 Q9USP6
Saccharomyces cerevisiae (Sce) CLC1
(S000003399)		 GI:6321606 P17891
Kluyveromyces lactis (Kla) KLLA0F14619g GI:50311425
Magnaporthe grisea (Mgr) MGG_06876 GI:145605766
Neurospora crassa (Ncr) NCU04115.1 GI:32405684


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC9B6.08
GO:0005794 Golgi apparatus C
IDA
SpoSPBC9B6.08
RCA
SceS000003399
GO:0030125 clathrin vesicle coat C
ISS
SpoSPBC9B6.08
TAS
SceS000003399
GO:0044431 Golgi apparatus part C
RCA
SceS000003399
GO:0003674 molecular_function F
ND
SpoSPBC9B6.08
GO:0005198 structural molecule activity F
TAS
SceS000003399
GO:0006886 intracellular protein transport P
NAS
SpoSPBC9B6.08
GO:0006897 endocytosis P
IDA
SceS000003399
IMP
SceS000003399
IPI
SceS000003399
GO:0016192 vesicle-mediated transport P
ISS
SpoSPBC9B6.08
TAS
SceS000003399

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_3751

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga7573 ENSANGP00000017984
Anopheles gambiae (Aga) aga7572 ENSANGP00000026839
Anopheles gambiae (Aga) aga7571 ENSANGP00000027399
Ashbya gossypii (Ago) ago4620 AGR309C
Caenorhabditis elegans (Cel) cel14585 T05B11.3
(CE13219;
WBGene00020246)
Candida glabrata (Cgl) cgl2902 CAGL0I08833g
Cryptococcus neoformans (Cne) cne202 162.m02630
Dictyostelium discoideum (Ddi) ddi12272 DDB0191305
Debaryomyces hansenii (Dha) dha826 DEHA0B03234g
Drosophila melanogaster (Dme) dme10362 CG6948-PA
(FBgn0024814)
Takifugu rubripes (Fru) fru14847 SINFRUP00000167325
Takifugu rubripes (Fru) fru18461 SINFRUP00000169881
Gallus gallus (Gga) gga5823 ENSGALP00000005281
(RCJMB04_10n18)
Gallus gallus (Gga) gga27912 ENSGALP00000024693
Homo sapiens (Hsa) hsa31257 ENSP00000242284
(CLTA)		 P09496-2
Homo sapiens (Hsa) hsa26196 ENSP00000310812
(CLTB)		 P09497-2
Kluyveromyces lactis (Kla) kla4737 KLLA0F14619g
Mus musculus (Mmu) mmu6991 ENSMUSP00000053371
(MGI:1921575)		 Q6IRU5-1
Neurospora crassa (Ncr) ncr3991 NCU04115.2
Rattus norvegicus (Rno) rno13046 ENSRNOP00000028993
(RGD:621353)		 P08082-2
Rattus norvegicus (Rno) rno23057 ENSRNOP00000035138
(RGD:70919)		 P08081-2
Saccharomyces cerevisiae (Sce) sce2545 YGR167W
(S000003399)
Schizosaccharomyces pombe (Spo) spo1102 SPBC9B6.08 Q9USP6
Yarrowia lipolytica (Yli) yli5247 YALI0E33253g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC9B6.08
GO:0005794 Golgi apparatus C
IDA
SpoSPBC9B6.08
RCA
SceS000003399
GO:0005905 coated pit C
ISS
DmeFBgn0024814
NAS
DmeFBgn0024814
TAS
DmeFBgn0024814
GO:0008021 synaptic vesicle C
TAS
DmeFBgn0024814
GO:0030118 clathrin coat C
ISO
MmuMGI:1921575
GO:0030125 clathrin vesicle coat C
ISS
DmeFBgn0024814
SpoSPBC9B6.08
TAS
DmeFBgn0024814
SceS000003399
GO:0030132 clathrin coat of coated pit C
ISS
DmeFBgn0024814
GO:0030135 coated vesicle C
TAS
DmeFBgn0024814
GO:0044431 Golgi apparatus part C
RCA
SceS000003399
GO:0003674 molecular_function F
ND
SpoSPBC9B6.08
GO:0005198 structural molecule activity F
TAS
SceS000003399
GO:0005326 neurotransmitter transporter activity F
ISS
DmeFBgn0024814
GO:0042277 peptide binding F
ISO
MmuMGI:1921575
GO:0006836 neurotransmitter transport P
ISS
DmeFBgn0024814
GO:0006886 intracellular protein transport P
NAS
SpoSPBC9B6.08
GO:0006897 endocytosis P
IDA
SceS000003399
IMP
SceS000003399
IPI
SceS000003399
GO:0007269 neurotransmitter secretion P
ISS
DmeFBgn0024814
NAS
DmeFBgn0024814
GO:0008150 biological_process P
ND
MmuMGI:1921575
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00020246
GO:0016183 synaptic vesicle coating P
ISS
DmeFBgn0024814
TAS
DmeFBgn0024814
GO:0016192 vesicle-mediated transport P
ISS
SpoSPBC9B6.08
TAS
SceS000003399

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPBC9B6.08
(Q9USP6)		 YGR167W
(S000003399)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005737 cytoplasm C
IDA
SpoSPBC9B6.08
GO:0005794 Golgi apparatus C
IDA
SpoSPBC9B6.08
RCA
SceS000003399
GO:0030125 clathrin vesicle coat C
ISS
SpoSPBC9B6.08
TAS
SceS000003399
GO:0044431 Golgi apparatus part C
RCA
SceS000003399
GO:0003674 molecular_function F
ND
SpoSPBC9B6.08
GO:0005198 structural molecule activity F
TAS
SceS000003399
GO:0006886 intracellular protein transport P
NAS
SpoSPBC9B6.08
GO:0006897 endocytosis P
IDA
SceS000003399
IMP
SceS000003399
IPI
SceS000003399
GO:0016192 vesicle-mediated transport P
ISS
SpoSPBC9B6.08
TAS
SceS000003399

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