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Search term: YGR186W

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name TFG1
SGD link S000003418
Alternative ID YGR186W
Description TFIIF (Transcription Factor II) largest subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP74
Synonyms YGR186W
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2393 ACDHYP-

KOGs classification KOGs description
INFORMATION STORAGE AND PROCESSING Transcription initiation factor IIF, large subunit (RAP74)

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At4g12610 GI:15235418
Caenorhabditis elegans (Cel) CE06742
(WBGene00015296)		 GI:17531417 Q17558
Drosophila melanogaster (Dme) 7298920
(TfIIFalpha)		 GI:17737791
Homo sapiens (Hsa) Hs4504197 GI:4504197
Saccharomyces cerevisiae (Sce) YGR186w
(S000003418)		 GI:6321625 P41895
Schizosaccharomyces pombe (Spo) SPCC1620.09c GI:19075967 O94416


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
AthAt4g12610
SpoSPCC1620.09c
NAS
DmeTfIIFalpha
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
RCA
SceS000003418
GO:0005674 transcription factor TFIIF complex C
ISS
DmeTfIIFalpha
SpoSPCC1620.09c
NAS
DmeTfIIFalpha
TAS
SceS000003418
GO:0005829 cytosol C
IDA
SpoSPCC1620.09c
GO:0009507 chloroplast C
IDA
AthAt4g12610
GO:0016251 general RNA polymerase II transcription factor
activity		 F
ISS
DmeTfIIFalpha
SpoSPCC1620.09c
NAS
DmeTfIIFalpha
TAS
SceS000003418
GO:0016986 transcription initiation factor
activity		 F
ISS
AthAt4g12610
NAS
DmeTfIIFalpha
GO:0000003 reproduction P
IMP
CelWBGene00015296
GO:0006366 transcription from RNA polymerase II
promoter		 P
NAS
DmeTfIIFalpha
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
ISS
DmeTfIIFalpha
SpoSPCC1620.09c
TAS
SceS000003418
GO:0006898 receptor-mediated endocytosis P
IMP
CelWBGene00015296
GO:0008340 determination of adult lifespan P
IMP
CelWBGene00015296
GO:0009792 embryo development ending in birth or egg
hatching		 P
IMP
CelWBGene00015296
GO:0031329 regulation of cellular catabolic
process		 P
RCA
SceS000003418
GO:0040010 positive regulation of growth rate P
IMP
CelWBGene00015296
GO:0040035 hermaphrodite genitalia development P
IMP
CelWBGene00015296

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
39154

Species Gene ID NCBI link UniProt link
Saccharomyces cerevisiae (Sce) TFG1
(S000003418)		 GI:6321625 P41895
Kluyveromyces lactis (Kla) KLLA0F15411g GI:50311495
Eremothecium gossypii (Ego) AGOS_AAL149C GI:45184675


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
RCA
SceS000003418
GO:0005674 transcription factor TFIIF complex C
TAS
SceS000003418
GO:0016251 general RNA polymerase II transcription factor
activity		 F
TAS
SceS000003418
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
TAS
SceS000003418
GO:0031329 regulation of cellular catabolic
process		 P
RCA
SceS000003418

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_11611

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Ashbya gossypii (Ago) ago38 AAL149C
Candida glabrata (Cgl) cgl892 CAGL0D05478g
Cryptococcus neoformans (Cne) cne5217 179.m00064
Debaryomyces hansenii (Dha) dha6570 DEHA0G19459g
Encephalitozoon cuniculi (Ecu) ecu1012 19074924
Kluyveromyces lactis (Kla) kla4772 KLLA0F15411g
Neurospora crassa (Ncr) ncr4238 NCU04363.2
Saccharomyces cerevisiae (Sce) sce2566 YGR186W
(S000003418)
Schizosaccharomyces pombe (Spo) spo843 SPCC1620.09c O94416
Yarrowia lipolytica (Yli) yli5881 YALI0F12815g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC1620.09c
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
RCA
SceS000003418
GO:0005674 transcription factor TFIIF complex C
ISS
SpoSPCC1620.09c
TAS
SceS000003418
GO:0005829 cytosol C
IDA
SpoSPCC1620.09c
GO:0016251 general RNA polymerase II transcription factor
activity		 F
ISS
SpoSPCC1620.09c
TAS
SceS000003418
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
ISS
SpoSPCC1620.09c
TAS
SceS000003418
GO:0031329 regulation of cellular catabolic
process		 P
RCA
SceS000003418

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPCC1620.09c
(O94416)		 YGR186W
(S000003418)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0005634 nucleus C
IDA
SpoSPCC1620.09c
GO:0005665 DNA-directed RNA polymerase II, core
complex		 C
RCA
SceS000003418
GO:0005674 transcription factor TFIIF complex C
ISS
SpoSPCC1620.09c
TAS
SceS000003418
GO:0005829 cytosol C
IDA
SpoSPCC1620.09c
GO:0016251 general RNA polymerase II transcription factor
activity		 F
ISS
SpoSPCC1620.09c
TAS
SceS000003418
GO:0006367 transcription initiation from RNA polymerase II
promoter		 P
ISS
SpoSPCC1620.09c
TAS
SceS000003418
GO:0031329 regulation of cellular catabolic
process		 P
RCA
SceS000003418

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