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Search term: YGR223C

Gene summary:

Species Saccharomyces cerevisiae (Sce)
Primary name HSV2
SGD link S000003455
Alternative ID YGR223C
Description Phosphatidylinositol 3,5-bisphosphate-binding protein, plays a role in micronucleophagy; predicted to fold as a seven-bladed beta-propeller; displays punctate cytoplasmic localization
Synonyms YGR223C
Datasets
KOGs
Inparanoid
HomoloGene
OrthoMCL
Curated

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GO info in one table:

KOG results:

KOG name Phylogenetic pattern
(and link to KOGs with this pattern)
KOG2111 ACDHYP-

KOGs classification KOGs description
POORLY CHARACTERIZED Uncharacterized conserved protein, contains WD40 repeats

Species KOG link NCBI link UniProt link
Arabidopsis thaliana (Ath) At2g40810 GI:15226757
Arabidopsis thaliana (Ath) At3g56440 GI:15228923
Arabidopsis thaliana (Ath) At3g62770 GI:11288364
Arabidopsis thaliana (Ath) At5g05150 GI:15238452
Caenorhabditis elegans (Cel) CE28977 GI:17555684
Drosophila melanogaster (Dme) 7299116 GI:7299116
Homo sapiens (Hsa) Hs13626265 GI:13626265
Homo sapiens (Hsa) Hs20540445 GI:20540445
Homo sapiens (Hsa) Hs22064307 GI:22064307
Homo sapiens (Hsa) Hs5901988 GI:5901988
Homo sapiens (Hsa) Hs9625016 GI:9625016
Saccharomyces cerevisiae (Sce) YGR223c
(S000003455)		 GI:6321662 P50079
Schizosaccharomyces pombe (Spo) SPAC458.06 GI:19115612 Q9P3W2


GO terms for KOG results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000300 peripheral to membrane of membrane
fraction		 C
IDA
SceS000003455
GO:0000324 fungal-type vacuole C
IDA
SceS000003455
ISS
SpoSPAC458.06
GO:0005575 cellular_component C
ND
AthAt5g05150
At2g40810
At3g56440
GO:0005737 cytoplasm C
IDA
SceS000003455
SpoSPAC458.06
ISS
SpoSPAC458.06
GO:0005768 endosome C
IDA
SceS000003455
GO:0005794 Golgi apparatus C
IDA
SpoSPAC458.06
GO:0043234 protein complex C
NAS
SpoSPAC458.06
GO:0003674 molecular_function F
ND
AthAt5g05150
At3g62770
At2g40810
GO:0035091 phosphoinositide binding F
IDA
SceS000003455
ISS
SpoSPAC458.06
GO:0006914 autophagy P
IGI
SpoSPAC458.06
IMP
AthAt3g62770
GO:0006995 cellular response to nitrogen starvation P
IGI
SpoSPAC458.06
GO:0008150 biological_process P
ND
AthAt5g05150
At2g40810
At3g56440
GO:0010150 leaf senescence P
IMP
AthAt3g62770
GO:0016236 macroautophagy P
IC
SpoSPAC458.06
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000003455
GO:0042594 response to starvation P
IEP
AthAt3g62770
IMP
AthAt3g62770

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HomoloGene results:

HomoloGene cluster Phylogenetic pattern
107734

Species Gene ID NCBI link UniProt link
Schizosaccharomyces pombe (Spo) SPAC458.06 GI:19115612 Q9P3W2
Saccharomyces cerevisiae (Sce) HSV2
(S000003455)		 GI:6321662 P50079
Eremothecium gossypii (Ego) AGOS_ADL134W GI:45187739
Oryza sativa (Osa) Os05g0169200 GI:115462321


GO terms for Homologene results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000300 peripheral to membrane of membrane
fraction		 C
IDA
SceS000003455
GO:0000324 fungal-type vacuole C
IDA
SceS000003455
ISS
SpoSPAC458.06
GO:0005737 cytoplasm C
IDA
SceS000003455
SpoSPAC458.06
ISS
SpoSPAC458.06
GO:0005768 endosome C
IDA
SceS000003455
GO:0005794 Golgi apparatus C
IDA
SpoSPAC458.06
GO:0043234 protein complex C
NAS
SpoSPAC458.06
GO:0035091 phosphoinositide binding F
IDA
SceS000003455
ISS
SpoSPAC458.06
GO:0006914 autophagy P
IGI
SpoSPAC458.06
GO:0006995 cellular response to nitrogen starvation P
IGI
SpoSPAC458.06
GO:0016236 macroautophagy P
IC
SpoSPAC458.06
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000003455

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OrthoMCL results:

Selected databases only

OrthoMCL cluster Phylogenetic pattern
OG1_1060

Species OrthoMCL
sequence		 Model organism
protein page		 UniProt link
Anopheles gambiae (Aga) aga6651 ENSANGP00000011724
Anopheles gambiae (Aga) aga13640 ENSANGP00000016409
Anopheles gambiae (Aga) aga13641 ENSANGP00000026336
Ashbya gossypii (Ago) ago1607 ADL134W
Arabidopsis thaliana (Ath) ath11224 At2g40810.1
Arabidopsis thaliana (Ath) ath11225 At2g40810.2
Arabidopsis thaliana (Ath) ath17035 At3g56440.1
Arabidopsis thaliana (Ath) ath17727 At3g62770.1
Arabidopsis thaliana (Ath) ath17728 At3g62770.2
Caenorhabditis elegans (Cel) cel18438 Y39A1A.1a
(CE33215;
WBGene00012641)
Caenorhabditis elegans (Cel) cel18439 Y39A1A.1b
(CE33216)
Caenorhabditis elegans (Cel) cel18440 Y39A1A.1c
(CE37799)
Candida glabrata (Cgl) cgl295 CAGL0B02101g
Dictyostelium discoideum (Ddi) ddi6090 DDB0204851
Debaryomyces hansenii (Dha) dha1777 DEHA0C07898g
Drosophila melanogaster (Dme) dme11610 CG11975-PA
(FBgn0037648)
Danio rerio (Dre) dre9857 ENSDARP00000035371
Danio rerio (Dre) dre27324 ENSDARP00000037790
(wdr45l)		 Q7ZUW6
Takifugu rubripes (Fru) fru25194 SINFRUP00000145327
Takifugu rubripes (Fru) fru22293 SINFRUP00000150109
Gallus gallus (Gga) gga8347 ENSGALP00000002372
(WDR45L)		 Q5ZL16
Homo sapiens (Hsa) hsa14579 ENSP00000269395
Homo sapiens (Hsa) hsa32765 ENSP00000348848
(WDR45)		 Q9Y484-3
Kluyveromyces lactis (Kla) kla3665 KLLA0E15972g
Mus musculus (Mmu) mmu5368 ENSMUSP00000026173
(MGI:1914090)		 Q9CR39
Mus musculus (Mmu) mmu28591 ENSMUSP00000041456
(MGI:1859606)		 Q91VM3-1
Neurospora crassa (Ncr) ncr2390 NCU02466.2
Oryza sativa (Osa) osa10402 2776.m00135
Oryza sativa (Osa) osa35311 4727.m00150
Oryza sativa (Osa) osa35285 4773.m00188
Plasmodium falciparum (Pfa) pfa347 PF10_0126
Rattus norvegicus (Rno) rno30983 ENSRNOP00000013369
(RGD:1359718)
Saccharomyces cerevisiae (Sce) sce2604 YGR223C
(S000003455)
Schizosaccharomyces pombe (Spo) spo2660 SPAC458.06 Q9P3W2
Yarrowia lipolytica (Yli) yli1376 YALI0B15290g


GO terms for OrthoMCL results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000300 peripheral to membrane of membrane
fraction		 C
IDA
SceS000003455
GO:0000324 fungal-type vacuole C
IDA
SceS000003455
ISS
SpoSPAC458.06
GO:0005575 cellular_component C
ND
AthAt2g40810
At3g56440
MmuMGI:1914090
MGI:1859606
PfaPF10_0126
GO:0005737 cytoplasm C
IDA
SceS000003455
SpoSPAC458.06
ISS
SpoSPAC458.06
GO:0005768 endosome C
IDA
SceS000003455
GO:0005794 Golgi apparatus C
IDA
SpoSPAC458.06
GO:0043234 protein complex C
NAS
SpoSPAC458.06
GO:0003674 molecular_function F
ND
AthAt3g62770
At2g40810
MmuMGI:1859606
MGI:1914090
PfaPF10_0126
GO:0035091 phosphoinositide binding F
IDA
SceS000003455
ISS
SpoSPAC458.06
GO:0006914 autophagy P
IGI
SpoSPAC458.06
IMP
AthAt3g62770
GO:0006995 cellular response to nitrogen starvation P
IGI
SpoSPAC458.06
GO:0008150 biological_process P
ND
AthAt2g40810
At3g56440
MmuMGI:1859606
MGI:1914090
PfaPF10_0126
GO:0010150 leaf senescence P
IMP
AthAt3g62770
GO:0016236 macroautophagy P
IC
SpoSPAC458.06
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000003455
GO:0042594 response to starvation P
IEP
AthAt3g62770
IMP
AthAt3g62770

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Curated yeast ortholog results:

S. pombe
systematic ID		 S. cerevisiae
systematic ID
SPAC458.06
(Q9P3W2)		 YGR223C
(S000003455)


GO terms for curated homolog results:

GO ID GO term GO aspect Evidence codes and associations
GO:0000300 peripheral to membrane of membrane
fraction		 C
IDA
SceS000003455
GO:0000324 fungal-type vacuole C
IDA
SceS000003455
ISS
SpoSPAC458.06
GO:0005737 cytoplasm C
IDA
SceS000003455
SpoSPAC458.06
ISS
SpoSPAC458.06
GO:0005768 endosome C
IDA
SceS000003455
GO:0005794 Golgi apparatus C
IDA
SpoSPAC458.06
GO:0043234 protein complex C
NAS
SpoSPAC458.06
GO:0035091 phosphoinositide binding F
IDA
SceS000003455
ISS
SpoSPAC458.06
GO:0006914 autophagy P
IGI
SpoSPAC458.06
GO:0006995 cellular response to nitrogen starvation P
IGI
SpoSPAC458.06
GO:0016236 macroautophagy P
IC
SpoSPAC458.06
GO:0034727 piecemeal microautophagy of nucleus P
IMP
SceS000003455

Back to the top
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GO info in one table:

s.khadayate@ucl.ac.uk